RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 CHRNA5P30532 468 aa18.55■□□□□ 0.56
SCAMP4-206ENST00000460767 MORC1Q86VD1 984 aa18.55■□□□□ 0.56
SCAMP4-206ENST00000460767 GLTPD2A6NH11 291 aa18.54■□□□□ 0.56
SCAMP4-206ENST00000460767 LMNB1P20700 586 aa18.54■□□□□ 0.56
SCAMP4-206ENST00000460767 ZNF530Q6P9A1 599 aaPredicted RBP18.54■□□□□ 0.56
SCAMP4-206ENST00000460767 VEGFAP15692 232 aaPredicted RBP18.53■□□□□ 0.56
SCAMP4-206ENST00000460767 INTS5Q6P9B9 1019 aaKnown RBP18.53■□□□□ 0.56
SCAMP4-206ENST00000460767 COL3A1P02461 1466 aaPredicted RBP18.52■□□□□ 0.56
SCAMP4-206ENST00000460767 HSPA1AP0DMV8 641 aaKnown RBP18.52■□□□□ 0.56
SCAMP4-206ENST00000460767 HSPA1BP0DMV9 641 aaKnown RBP18.52■□□□□ 0.56
SCAMP4-206ENST00000460767 TNNT2P45379 298 aaPredicted RBP18.52■□□□□ 0.56
SCAMP4-206ENST00000460767 SOS1Q07889 1333 aaPredicted RBP18.51■□□□□ 0.55
SCAMP4-206ENST00000460767 PTCD1O75127 700 aaKnown RBP18.51■□□□□ 0.55
SCAMP4-206ENST00000460767 MTHFSP49914 203 aa18.51■□□□□ 0.55
SCAMP4-206ENST00000460767 DICER1Q9UPY3 1922 aaKnown RBP18.51■□□□□ 0.55
SCAMP4-206ENST00000460767 RASSF7Q02833 373 aa18.5■□□□□ 0.55
SCAMP4-206ENST00000460767 C1orf141Q5JVX7 400 aa18.5■□□□□ 0.55
SCAMP4-206ENST00000460767 CCDC88AQ3V6T2 1871 aa18.5■□□□□ 0.55
SCAMP4-206ENST00000460767 CAPN15O75808 1086 aa18.49■□□□□ 0.55
SCAMP4-206ENST00000460767 CC2D1BQ5T0F9 858 aaKnown RBP18.49■□□□□ 0.55
SCAMP4-206ENST00000460767 NFATC2IPQ8NCF5 419 aa18.49■□□□□ 0.55
SCAMP4-206ENST00000460767 UBR2Q8IWV8 1755 aa18.48■□□□□ 0.55
SCAMP4-206ENST00000460767 COL15A1P39059 1388 aa18.48■□□□□ 0.55
SCAMP4-206ENST00000460767 ZPR1O75312 459 aa18.48■□□□□ 0.55
SCAMP4-206ENST00000460767 USPL1Q5W0Q7 1092 aa18.48■□□□□ 0.55
SCAMP4-206ENST00000460767 NARFQ9UHQ1 456 aa18.48■□□□□ 0.55
SCAMP4-206ENST00000460767 FER1L6Q2WGJ9 1857 aa18.48■□□□□ 0.55
SCAMP4-206ENST00000460767 VIRMAQ69YN4 1812 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-206ENST00000460767 IL13P35225 146 aa18.47■□□□□ 0.55
SCAMP4-206ENST00000460767 TTLL6Q8N841 843 aa18.47■□□□□ 0.55
SCAMP4-206ENST00000460767 NFIXQ14938 502 aa18.46■□□□□ 0.55
SCAMP4-206ENST00000460767 SCN7AQ01118 1682 aa18.45■□□□□ 0.54
SCAMP4-206ENST00000460767 POTECB2RU33 542 aa18.45■□□□□ 0.54
SCAMP4-206ENST00000460767 NFKBIEO00221 500 aa18.45■□□□□ 0.54
SCAMP4-206ENST00000460767 CYP19A1P11511 503 aaPredicted RBP18.45■□□□□ 0.54
SCAMP4-206ENST00000460767 ANKRD31Q8N7Z5 1873 aa18.45■□□□□ 0.54
SCAMP4-206ENST00000460767 AEBP1Q8IUX7 1158 aa18.44■□□□□ 0.54
SCAMP4-206ENST00000460767 DNAJC10Q8IXB1 793 aa18.44■□□□□ 0.54
SCAMP4-206ENST00000460767 BCL2L12Q9HB09 334 aa18.44■□□□□ 0.54
SCAMP4-206ENST00000460767 CREBZFQ9NS37 354 aa18.44■□□□□ 0.54
SCAMP4-206ENST00000460767 PDZRN3Q9UPQ7 1066 aa18.44■□□□□ 0.54
SCAMP4-206ENST00000460767 LTBP3Q9NS15 1303 aa18.44■□□□□ 0.54
SCAMP4-206ENST00000460767 COL11A2P13942 1736 aaPredicted RBP18.43■□□□□ 0.54
SCAMP4-206ENST00000460767 ARFGEF2Q9Y6D5 1785 aa18.43■□□□□ 0.54
SCAMP4-206ENST00000460767 SERPINB2P05120 415 aa18.43■□□□□ 0.54
SCAMP4-206ENST00000460767 AKAP4Q5JQC9 854 aa18.43■□□□□ 0.54
SCAMP4-206ENST00000460767 SLC52A2Q9HAB3 445 aa18.43■□□□□ 0.54
SCAMP4-206ENST00000460767 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
SCAMP4-206ENST00000460767 DPY19L2Q6NUT2 758 aa18.42■□□□□ 0.54
SCAMP4-206ENST00000460767 VSIG10Q8N0Z9 540 aa18.42■□□□□ 0.54
SCAMP4-206ENST00000460767 C2CD5Q86YS7 1000 aa18.4■□□□□ 0.54
SCAMP4-206ENST00000460767 ZBTB1Q9Y2K1 713 aa18.4■□□□□ 0.54
SCAMP4-206ENST00000460767 PCNTO95613 3336 aa18.39■□□□□ 0.54
SCAMP4-206ENST00000460767 H0YIN7 160 aa18.39■□□□□ 0.53
SCAMP4-206ENST00000460767 PPP2R1AP30153 589 aa18.39■□□□□ 0.53
SCAMP4-206ENST00000460767 SULT6B1Q6IMI4 303 aa18.39■□□□□ 0.53
SCAMP4-206ENST00000460767 SCN4AP35499 1836 aa18.39■□□□□ 0.53
SCAMP4-206ENST00000460767 CHADLQ6NUI6 762 aa18.38■□□□□ 0.53
SCAMP4-206ENST00000460767 PRDM10Q9NQV6 1147 aa18.38■□□□□ 0.53
SCAMP4-206ENST00000460767 CNTNAP1P78357 1384 aa18.38■□□□□ 0.53
SCAMP4-206ENST00000460767 PASKQ96RG2 1323 aa18.35■□□□□ 0.53
SCAMP4-206ENST00000460767 A0A087WZG4 1122 aa18.35■□□□□ 0.53
SCAMP4-206ENST00000460767 RNMTO43148 476 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-206ENST00000460767 PDE6BP35913 854 aa18.35■□□□□ 0.53
SCAMP4-206ENST00000460767 EIF5P55010 431 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-206ENST00000460767 DDX10Q13206 875 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-206ENST00000460767 ERFEQ4G0M1 354 aa18.35■□□□□ 0.53
SCAMP4-206ENST00000460767 BRIP1Q9BX63 1249 aa18.35■□□□□ 0.53
SCAMP4-206ENST00000460767 BCORQ6W2J9 1755 aa18.35■□□□□ 0.53
SCAMP4-206ENST00000460767 ADAMTSL1Q8N6G6 1762 aa18.35■□□□□ 0.53
SCAMP4-206ENST00000460767 DIAPH1O60610 1272 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-206ENST00000460767 LGR6Q9HBX8 967 aa18.34■□□□□ 0.53
SCAMP4-206ENST00000460767 SIPA1L3O60292 1781 aaPredicted RBP18.33■□□□□ 0.53
SCAMP4-206ENST00000460767 SLC39A6Q13433 755 aa18.33■□□□□ 0.52
SCAMP4-206ENST00000460767 L3MBTL3Q96JM7 780 aaPredicted RBP18.33■□□□□ 0.52
SCAMP4-206ENST00000460767 TAOK3Q9H2K8 898 aa18.33■□□□□ 0.52
SCAMP4-206ENST00000460767 IQCA1LA6NCM1 817 aa18.32■□□□□ 0.52
SCAMP4-206ENST00000460767 FOXN1O15353 648 aa18.32■□□□□ 0.52
SCAMP4-206ENST00000460767 SOGA3Q5TF21 947 aa18.32■□□□□ 0.52
SCAMP4-206ENST00000460767 MKRN1Q9UHC7 482 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-206ENST00000460767 SLX4Q8IY92 1834 aa18.31■□□□□ 0.52
SCAMP4-206ENST00000460767 C21orf2O43822 256 aa18.31■□□□□ 0.52
SCAMP4-206ENST00000460767 PRR5LQ6MZQ0 368 aa18.31■□□□□ 0.52
SCAMP4-206ENST00000460767 LDHDQ86WU2 507 aa18.31■□□□□ 0.52
SCAMP4-206ENST00000460767 CACNA1SQ13698 1873 aa18.31■□□□□ 0.52
SCAMP4-206ENST00000460767 SLC34A2O95436 690 aa18.3■□□□□ 0.52
SCAMP4-206ENST00000460767 STARD3NLO95772 234 aa18.3■□□□□ 0.52
SCAMP4-206ENST00000460767 TBC1D9BQ66K14 1250 aa18.3■□□□□ 0.52
SCAMP4-206ENST00000460767 STYK1Q6J9G0 422 aa18.3■□□□□ 0.52
SCAMP4-206ENST00000460767 CNKSR1Q969H4 720 aa18.3■□□□□ 0.52
SCAMP4-206ENST00000460767 THSD7BQ9C0I4 1608 aa18.3■□□□□ 0.52
SCAMP4-206ENST00000460767 POTEIP0CG38 1075 aa18.29■□□□□ 0.52
SCAMP4-206ENST00000460767 POTEJP0CG39 1038 aa18.29■□□□□ 0.52
SCAMP4-206ENST00000460767 CTCFP49711 727 aaPredicted RBP18.29■□□□□ 0.52
SCAMP4-206ENST00000460767 RALBP1Q15311 655 aa18.29■□□□□ 0.52
SCAMP4-206ENST00000460767 ZNF622Q969S3 477 aaKnown RBP eCLIP18.29■□□□□ 0.52
SCAMP4-206ENST00000460767 DDNO94850 711 aaPredicted RBP18.28■□□□□ 0.52
SCAMP4-206ENST00000460767 CANXP27824 592 aaKnown RBP18.28■□□□□ 0.52
SCAMP4-206ENST00000460767 IL6STP40189 918 aaPredicted RBP18.28■□□□□ 0.52
SCAMP4-206ENST00000460767 TEX13AQ9BXU3 409 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms