RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 ZRANB1Q9UGI0 708 aa18.72■□□□□ 0.59
SSR4-206ENST00000460616 ANKRD26Q9UPS8 1709 aa18.71■□□□□ 0.59
SSR4-206ENST00000460616 NME9Q86XW9 330 aa18.71■□□□□ 0.58
SSR4-206ENST00000460616 PDCL2Q8N4E4 241 aa18.7■□□□□ 0.58
SSR4-206ENST00000460616 SSH2Q76I76 1423 aa18.7■□□□□ 0.58
SSR4-206ENST00000460616 NOL8Q76FK4 1167 aaKnown RBP18.69■□□□□ 0.58
SSR4-206ENST00000460616 SLAIN2Q9P270 581 aa18.69■□□□□ 0.58
SSR4-206ENST00000460616 PIK3C2AO00443 1686 aa18.69■□□□□ 0.58
SSR4-206ENST00000460616 SPDYE4A6NLX3 237 aa18.68■□□□□ 0.58
SSR4-206ENST00000460616 CCDC183Q5T5S1 534 aa18.68■□□□□ 0.58
SSR4-206ENST00000460616 ATP10DQ9P241 1426 aa18.68■□□□□ 0.58
SSR4-206ENST00000460616 MCCP23508 829 aa18.68■□□□□ 0.58
SSR4-206ENST00000460616 BRINP3Q76B58 766 aa18.68■□□□□ 0.58
SSR4-206ENST00000460616 TTC21BQ7Z4L5 1316 aa18.68■□□□□ 0.58
SSR4-206ENST00000460616 KDM4AO75164 1064 aa18.67■□□□□ 0.58
SSR4-206ENST00000460616 HCLS1P14317 486 aaPredicted RBP18.67■□□□□ 0.58
SSR4-206ENST00000460616 FBLN1P23142 703 aa18.67■□□□□ 0.58
SSR4-206ENST00000460616 DIAPH3Q9NSV4 1193 aa18.67■□□□□ 0.58
SSR4-206ENST00000460616 POLKQ9UBT6 870 aa18.67■□□□□ 0.58
SSR4-206ENST00000460616 TRPM3Q9HCF6 1732 aaPredicted RBP18.67■□□□□ 0.58
SSR4-206ENST00000460616 CHAF1AQ13111 956 aaPredicted RBP18.67■□□□□ 0.58
SSR4-206ENST00000460616 WDR33Q9C0J8 1336 aaKnown RBP18.67■□□□□ 0.58
SSR4-206ENST00000460616 MARF1Q9Y4F3 1742 aaKnown RBP18.67■□□□□ 0.58
SSR4-206ENST00000460616 MX1P20591 662 aa18.66■□□□□ 0.58
SSR4-206ENST00000460616 PDE1AP54750 535 aa18.66■□□□□ 0.58
SSR4-206ENST00000460616 OSBPL3Q9H4L5 887 aa18.66■□□□□ 0.58
SSR4-206ENST00000460616 PALD1Q9ULE6 856 aa18.65■□□□□ 0.58
SSR4-206ENST00000460616 ROBO1Q9Y6N7 1651 aa18.65■□□□□ 0.58
SSR4-206ENST00000460616 ANAPC15P60006 121 aa18.65■□□□□ 0.58
SSR4-206ENST00000460616 PLCB2Q00722 1185 aa18.65■□□□□ 0.58
SSR4-206ENST00000460616 PSME1Q06323 249 aa18.65■□□□□ 0.58
SSR4-206ENST00000460616 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
SSR4-206ENST00000460616 KIAA1524Q8TCG1 905 aa18.65■□□□□ 0.58
SSR4-206ENST00000460616 ESYT1Q9BSJ8 1104 aa18.65■□□□□ 0.58
SSR4-206ENST00000460616 RIOK3O14730 519 aaKnown RBP18.64■□□□□ 0.58
SSR4-206ENST00000460616 NUTM2GQ5VZR2 741 aa18.64■□□□□ 0.58
SSR4-206ENST00000460616 RTL1A6NKG5 1358 aa18.64■□□□□ 0.57
SSR4-206ENST00000460616 ANKRD7Q92527 254 aa18.63■□□□□ 0.57
SSR4-206ENST00000460616 TPRNQ4KMQ1 711 aa18.63■□□□□ 0.57
SSR4-206ENST00000460616 TMEM87AQ8NBN3 555 aa18.63■□□□□ 0.57
SSR4-206ENST00000460616 MEIS3Q99687 375 aa18.63■□□□□ 0.57
SSR4-206ENST00000460616 HMMRO75330 724 aa18.62■□□□□ 0.57
SSR4-206ENST00000460616 U2AF2P26368 475 aaKnown RBP eCLIP18.62■□□□□ 0.575e-15■■■□□ 14.8
SSR4-206ENST00000460616 FGD1P98174 961 aa18.62■□□□□ 0.57
SSR4-206ENST00000460616 ANO2Q9NQ90 1003 aa18.62■□□□□ 0.57
SSR4-206ENST00000460616 FAM83GA6ND36 823 aa18.62■□□□□ 0.57
SSR4-206ENST00000460616 TPM3P06753 285 aa18.62■□□□□ 0.57
SSR4-206ENST00000460616 SRCIN1Q9C0H9 1055 aa18.62■□□□□ 0.57
SSR4-206ENST00000460616 NHSL1Q5SYE7 1610 aa18.61■□□□□ 0.57
SSR4-206ENST00000460616 KRT28Q7Z3Y7 464 aa18.61■□□□□ 0.57
SSR4-206ENST00000460616 UPF3BQ9BZI7 483 aaKnown RBP18.61■□□□□ 0.57
SSR4-206ENST00000460616 PXDNQ92626 1479 aa18.61■□□□□ 0.57
SSR4-206ENST00000460616 KRT24Q2M2I5 525 aa18.61■□□□□ 0.57
SSR4-206ENST00000460616 PYCARDQ9ULZ3 195 aa18.61■□□□□ 0.57
SSR4-206ENST00000460616 CNPY2Q9Y2B0 182 aa18.61■□□□□ 0.57
SSR4-206ENST00000460616 OVOS2A0A0J9YW53 1432 aa18.6■□□□□ 0.57
SSR4-206ENST00000460616 OVOS2Q6IE36 1432 aa18.6■□□□□ 0.57
SSR4-206ENST00000460616 ALS2Q96Q42 1657 aa18.6■□□□□ 0.57
SSR4-206ENST00000460616 UBE2HP62256 183 aa18.6■□□□□ 0.57
SSR4-206ENST00000460616 MAP2P11137 1827 aaKnown RBP18.6■□□□□ 0.57
SSR4-206ENST00000460616 CTIFO43310 598 aaKnown RBP18.6■□□□□ 0.57
SSR4-206ENST00000460616 DCTN1Q14203 1278 aa18.6■□□□□ 0.57
SSR4-206ENST00000460616 FEZ1Q99689 392 aa18.6■□□□□ 0.57
SSR4-206ENST00000460616 KCNF1Q9H3M0 494 aa18.6■□□□□ 0.57
SSR4-206ENST00000460616 IL13P35225 146 aa18.59■□□□□ 0.57
SSR4-206ENST00000460616 HAP1P54257 671 aaPredicted RBP18.59■□□□□ 0.57
SSR4-206ENST00000460616 RGS12O14924 1447 aa18.59■□□□□ 0.57
SSR4-206ENST00000460616 TSHZ3Q63HK5 1081 aa18.59■□□□□ 0.57
SSR4-206ENST00000460616 TTC21AQ8NDW8 1320 aa18.58■□□□□ 0.57
SSR4-206ENST00000460616 SOX12O15370 315 aa18.58■□□□□ 0.57
SSR4-206ENST00000460616 IGSF3O75054 1194 aa18.58■□□□□ 0.57
SSR4-206ENST00000460616 ABTB2Q8N961 1025 aa18.58■□□□□ 0.57
SSR4-206ENST00000460616 NPHP3Q7Z494 1330 aa18.58■□□□□ 0.56
SSR4-206ENST00000460616 CHMLP26374 656 aa18.58■□□□□ 0.56
SSR4-206ENST00000460616 USP54Q70EL1 1684 aa18.57■□□□□ 0.56
SSR4-206ENST00000460616 GOLGA6L6A8MZA4 724 aa18.57■□□□□ 0.56
SSR4-206ENST00000460616 AP5Z1O43299 807 aa18.57■□□□□ 0.56
SSR4-206ENST00000460616 PIP4K2BP78356 416 aa18.57■□□□□ 0.56
SSR4-206ENST00000460616 LMOD2Q6P5Q4 547 aa18.57■□□□□ 0.56
SSR4-206ENST00000460616 GIMAP6Q6P9H5 292 aa18.57■□□□□ 0.56
SSR4-206ENST00000460616 SPC24Q8NBT2 197 aa18.57■□□□□ 0.56
SSR4-206ENST00000460616 CERKQ8TCT0 537 aa18.57■□□□□ 0.56
SSR4-206ENST00000460616 RILPL2Q969X0 211 aa18.57■□□□□ 0.56
SSR4-206ENST00000460616 RPAP1Q9BWH6 1393 aaPredicted RBP18.57■□□□□ 0.56
SSR4-206ENST00000460616 TRIM6-TRIM34B2RNG4 842 aa18.57■□□□□ 0.56
SSR4-206ENST00000460616 COG3Q96JB2 828 aa18.57■□□□□ 0.56
SSR4-206ENST00000460616 OGFRQ9NZT2 677 aa18.57■□□□□ 0.56
SSR4-206ENST00000460616 EMILIN1Q9Y6C2 1016 aa18.57■□□□□ 0.56
SSR4-206ENST00000460616 PTPRCP08575 1304 aa18.56■□□□□ 0.56
SSR4-206ENST00000460616 ZSCAN22P10073 491 aaPredicted RBP18.56■□□□□ 0.56
SSR4-206ENST00000460616 NLRP6P59044 892 aa18.56■□□□□ 0.56
SSR4-206ENST00000460616 IL17RAQ96F46 866 aa18.56■□□□□ 0.56
SSR4-206ENST00000460616 FUCA2Q9BTY2 467 aa18.56■□□□□ 0.56
SSR4-206ENST00000460616 KLHL34Q8N239 644 aa18.56■□□□□ 0.56
SSR4-206ENST00000460616 UBAP1LF5GYI3 381 aa18.55■□□□□ 0.56
SSR4-206ENST00000460616 TAF3Q5VWG9 929 aa18.55■□□□□ 0.56
SSR4-206ENST00000460616 ZNF771Q7L3S4 317 aaPredicted RBP18.54■□□□□ 0.56
SSR4-206ENST00000460616 EXOC6BQ9Y2D4 811 aa18.54■□□□□ 0.56
SSR4-206ENST00000460616 USP31Q70CQ4 1352 aa18.53■□□□□ 0.56
SSR4-206ENST00000460616 FIBPO43427 364 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms