RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 BCL9O00512 1426 aa21.41■■□□□ 1.02
NELFCD-201ENST00000460601 PTPRCP08575 1304 aa21.41■■□□□ 1.02
NELFCD-201ENST00000460601 FKBP5Q13451 457 aaPredicted RBP21.41■■□□□ 1.02
NELFCD-201ENST00000460601 API5Q9BZZ5 524 aaKnown RBP21.41■■□□□ 1.02
NELFCD-201ENST00000460601 ATRNO75882 1429 aa21.4■■□□□ 1.02
NELFCD-201ENST00000460601 SNRPA1P09661 255 aaKnown RBP21.4■■□□□ 1.02
NELFCD-201ENST00000460601 ATG3Q9NT62 314 aa21.39■■□□□ 1.01
NELFCD-201ENST00000460601 TRPC5Q9UL62 973 aaPredicted RBP21.39■■□□□ 1.01
NELFCD-201ENST00000460601 THSD7AQ9UPZ6 1657 aa21.39■■□□□ 1.01
NELFCD-201ENST00000460601 SLC4A10Q6U841 1118 aa21.38■■□□□ 1.01
NELFCD-201ENST00000460601 QTRT2Q9H974 415 aaKnown RBP21.38■■□□□ 1.01
NELFCD-201ENST00000460601 DDX19BQ9UMR2 479 aa21.38■■□□□ 1.01
NELFCD-201ENST00000460601 PDIA6Q15084 440 aa21.38■■□□□ 1.01
NELFCD-201ENST00000460601 DBF4Q9UBU7 674 aaPredicted RBP21.38■■□□□ 1.01
NELFCD-201ENST00000460601 KCNQ2O43526 872 aa21.37■■□□□ 1.01
NELFCD-201ENST00000460601 PCDHB15Q9Y5E8 787 aa21.37■■□□□ 1.01
NELFCD-201ENST00000460601 MYL6BP14649 208 aa21.37■■□□□ 1.01
NELFCD-201ENST00000460601 CACNA1FO60840 1977 aa21.35■■□□□ 1.01
NELFCD-201ENST00000460601 RBM42Q9BTD8 480 aaKnown RBP21.35■■□□□ 1.01
NELFCD-201ENST00000460601 ZBTB7BO15156 539 aaPredicted RBP21.34■■□□□ 1.01
NELFCD-201ENST00000460601 ZBTB40Q9NUA8 1239 aa21.34■■□□□ 1.01
NELFCD-201ENST00000460601 INTS3Q68E01 1043 aaKnown RBP21.34■■□□□ 1.01
NELFCD-201ENST00000460601 PTF1AQ7RTS3 328 aa21.34■■□□□ 1.01
NELFCD-201ENST00000460601 C1orf115Q9H7X2 142 aa21.34■■□□□ 1.01
NELFCD-201ENST00000460601 IGHDP01880 384 aa21.33■■□□□ 1.01
NELFCD-201ENST00000460601 AIMP1Q12904 312 aaKnown RBP21.33■■□□□ 1.01
NELFCD-201ENST00000460601 SLC4A9Q96Q91 983 aa21.33■■□□□ 1.01
NELFCD-201ENST00000460601 DDX21Q9NR30 783 aaKnown RBP eCLIP21.33■■□□□ 1.01
NELFCD-201ENST00000460601 PI4KAP2A4QPH2 592 aa21.32■■□□□ 1
NELFCD-201ENST00000460601 SEPT12Q8IYM1 358 aa21.32■■□□□ 1
NELFCD-201ENST00000460601 PI4KAP1Q8N8J0 262 aa21.32■■□□□ 1
NELFCD-201ENST00000460601 LAMB4A4D0S4 1761 aa21.32■■□□□ 1
NELFCD-201ENST00000460601 SKAP1Q86WV1 359 aa21.32■■□□□ 1
NELFCD-201ENST00000460601 A1BGP04217 495 aa21.31■■□□□ 1
NELFCD-201ENST00000460601 LRP10Q7Z4F1 713 aa21.31■■□□□ 1
NELFCD-201ENST00000460601 KDM2BQ8NHM5 1336 aa21.31■■□□□ 1
NELFCD-201ENST00000460601 ADCY9O60503 1353 aa21.31■■□□□ 1
NELFCD-201ENST00000460601 NBPF26B4DH59 902 aa21.3■■□□□ 1
NELFCD-201ENST00000460601 ONECUT3O60422 494 aaPredicted RBP21.3■■□□□ 1
NELFCD-201ENST00000460601 NBPF14Q5TI25 921 aa21.3■■□□□ 1
NELFCD-201ENST00000460601 NBPF10Q6P3W6 841 aaKnown RBP21.3■■□□□ 1
NELFCD-201ENST00000460601 DNAJC10Q8IXB1 793 aa21.3■■□□□ 1
NELFCD-201ENST00000460601 NBPF15Q8N660 670 aa21.3■■□□□ 1
NELFCD-201ENST00000460601 CHMP4AQ9BY43 222 aa21.3■■□□□ 1
NELFCD-201ENST00000460601 HYPKQ9NX55 129 aa21.3■■□□□ 1
NELFCD-201ENST00000460601 MEIS3Q99687 375 aa21.29■■□□□ 1
NELFCD-201ENST00000460601 FBXO41Q8TF61 875 aa21.28■■□□□ 1
NELFCD-201ENST00000460601 COPS6Q7L5N1 327 aa21.28■■□□□ 1
NELFCD-201ENST00000460601 XAGE3Q8WTP9 111 aa21.28■■□□□ 1
NELFCD-201ENST00000460601 MAP3K2Q9Y2U5 619 aa21.27■■□□□ 1
NELFCD-201ENST00000460601 DNAAF4Q8WXU2 420 aa21.26■□□□□ 0.99
NELFCD-201ENST00000460601 CCT4P50991 539 aaKnown RBP21.26■□□□□ 0.99
NELFCD-201ENST00000460601 AAMPQ13685 434 aa21.26■□□□□ 0.99
NELFCD-201ENST00000460601 VSIG10Q8N0Z9 540 aa21.25■□□□□ 0.99
NELFCD-201ENST00000460601 ZNF330Q9Y3S2 320 aaPredicted RBP21.24■□□□□ 0.99
NELFCD-201ENST00000460601 PALLDQ8WX93 1383 aa21.24■□□□□ 0.99
NELFCD-201ENST00000460601 BEND3Q5T5X7 828 aa21.23■□□□□ 0.99
NELFCD-201ENST00000460601 KSR2Q6VAB6 950 aa21.23■□□□□ 0.99
NELFCD-201ENST00000460601 CENPQQ7L2Z9 268 aaPredicted RBP21.23■□□□□ 0.99
NELFCD-201ENST00000460601 PXDNLA1KZ92 1463 aa21.23■□□□□ 0.99
NELFCD-201ENST00000460601 KCNQ4P56696 695 aa21.23■□□□□ 0.99
NELFCD-201ENST00000460601 CWF19L2Q2TBE0 894 aaKnown RBP21.22■□□□□ 0.99
NELFCD-201ENST00000460601 ZNF772Q68DY9 489 aaPredicted RBP21.22■□□□□ 0.99
NELFCD-201ENST00000460601 TJP1Q07157 1748 aa21.22■□□□□ 0.99
NELFCD-201ENST00000460601 TTLL7Q6ZT98 887 aa21.22■□□□□ 0.99
NELFCD-201ENST00000460601 BRWD3Q6RI45 1802 aa21.21■□□□□ 0.99
NELFCD-201ENST00000460601 LOC102724428A0A0B4J2F2 783 aa21.21■□□□□ 0.99
NELFCD-201ENST00000460601 CYP19A1P11511 503 aaPredicted RBP21.21■□□□□ 0.99
NELFCD-201ENST00000460601 SIK1P57059 783 aa21.21■□□□□ 0.99
NELFCD-201ENST00000460601 RIC3Q7Z5B4 369 aa21.21■□□□□ 0.99
NELFCD-201ENST00000460601 SIRT2Q8IXJ6 389 aa21.21■□□□□ 0.99
NELFCD-201ENST00000460601 SRCIN1Q9C0H9 1055 aa21.21■□□□□ 0.99
NELFCD-201ENST00000460601 N4BP2Q86UW6 1770 aaPredicted RBP21.21■□□□□ 0.99
NELFCD-201ENST00000460601 ATP6V1AP38606 617 aa21.2■□□□□ 0.98
NELFCD-201ENST00000460601 STARD3NLO95772 234 aa21.2■□□□□ 0.98
NELFCD-201ENST00000460601 ANKRD13DQ6ZTN6 518 aa21.2■□□□□ 0.98
NELFCD-201ENST00000460601 USP44Q9H0E7 712 aa21.2■□□□□ 0.98
NELFCD-201ENST00000460601 RGS17Q9UGC6 210 aaPredicted RBP21.2■□□□□ 0.98
NELFCD-201ENST00000460601 ERBB4Q15303 1308 aa21.19■□□□□ 0.98
NELFCD-201ENST00000460601 DDX58O95786 925 aaKnown RBP21.19■□□□□ 0.98
NELFCD-201ENST00000460601 ITPK1Q13572 414 aa21.19■□□□□ 0.98
NELFCD-201ENST00000460601 ZBTB1Q9Y2K1 713 aa21.19■□□□□ 0.98
NELFCD-201ENST00000460601 ATP10DQ9P241 1426 aa21.19■□□□□ 0.98
NELFCD-201ENST00000460601 TEX13AQ9BXU3 409 aaPredicted RBP21.19■□□□□ 0.98
NELFCD-201ENST00000460601 BTAF1O14981 1849 aa21.19■□□□□ 0.98
NELFCD-201ENST00000460601 NHSQ6T4R5 1651 aa21.18■□□□□ 0.98
NELFCD-201ENST00000460601 NBPF7P0C2Y1 421 aaPredicted RBP21.18■□□□□ 0.98
NELFCD-201ENST00000460601 RBM6P78332 1123 aaKnown RBP21.18■□□□□ 0.98
NELFCD-201ENST00000460601 CHMP4BQ9H444 224 aaKnown RBP21.18■□□□□ 0.98
NELFCD-201ENST00000460601 RWDD1Q9H446 243 aaPredicted RBP21.17■□□□□ 0.98
NELFCD-201ENST00000460601 SBF2Q86WG5 1849 aa21.17■□□□□ 0.98
NELFCD-201ENST00000460601 IGKV5-2P06315 115 aa21.17■□□□□ 0.98
NELFCD-201ENST00000460601 KRT27Q7Z3Y8 459 aa21.17■□□□□ 0.98
NELFCD-201ENST00000460601 ZBTB3Q9H5J0 574 aa21.17■□□□□ 0.98
NELFCD-201ENST00000460601 HDAC1Q13547 482 aaPredicted RBP21.16■□□□□ 0.98
NELFCD-201ENST00000460601 MYD88Q99836 296 aa21.16■□□□□ 0.98
NELFCD-201ENST00000460601 ARFGEF2Q9Y6D5 1785 aa21.16■□□□□ 0.98
NELFCD-201ENST00000460601 CEP85Q6P2H3 762 aa21.15■□□□□ 0.98
NELFCD-201ENST00000460601 ARXQ96QS3 562 aa21.15■□□□□ 0.98
NELFCD-201ENST00000460601 ATP5J2-PTCD1G3V325 749 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms