RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 KCNQ2O43526 872 aa21.21■□□□□ 0.99
YIPF3-205ENST00000460547 ATP10DQ9P241 1426 aa21.21■□□□□ 0.99
YIPF3-205ENST00000460547 CCDC30Q5VVM6 783 aa21.21■□□□□ 0.99
YIPF3-205ENST00000460547 STK31Q9BXU1 1019 aa21.21■□□□□ 0.99
YIPF3-205ENST00000460547 ADAMTS7Q9UKP4 1686 aa21.21■□□□□ 0.99
YIPF3-205ENST00000460547 TNS1Q9HBL0 1735 aaKnown RBP21.21■□□□□ 0.99
YIPF3-205ENST00000460547 SIRT2Q8IXJ6 389 aa21.2■□□□□ 0.98
YIPF3-205ENST00000460547 N4BP2Q86UW6 1770 aaPredicted RBP21.2■□□□□ 0.98
YIPF3-205ENST00000460547 HOXB7P09629 217 aa21.19■□□□□ 0.98
YIPF3-205ENST00000460547 ZNF530Q6P9A1 599 aaPredicted RBP21.19■□□□□ 0.98
YIPF3-205ENST00000460547 CACNA1FO60840 1977 aa21.19■□□□□ 0.98
YIPF3-205ENST00000460547 PXDNLA1KZ92 1463 aa21.19■□□□□ 0.98
YIPF3-205ENST00000460547 CHD1LQ86WJ1 897 aa21.18■□□□□ 0.98
YIPF3-205ENST00000460547 CCT4P50991 539 aaKnown RBP21.18■□□□□ 0.98
YIPF3-205ENST00000460547 NBPF14Q5TI25 921 aa21.18■□□□□ 0.98
YIPF3-205ENST00000460547 SYTL4Q96C24 671 aaPredicted RBP21.18■□□□□ 0.98
YIPF3-205ENST00000460547 C1orf115Q9H7X2 142 aa21.18■□□□□ 0.98
YIPF3-205ENST00000460547 SPG7Q9UQ90 795 aa21.18■□□□□ 0.98
YIPF3-205ENST00000460547 PCDH11XQ9BZA7 1347 aa21.18■□□□□ 0.98
YIPF3-205ENST00000460547 PCDH11YQ9BZA8 1340 aa21.18■□□□□ 0.98
YIPF3-205ENST00000460547 CHMP4AQ9BY43 222 aa21.17■□□□□ 0.98
YIPF3-205ENST00000460547 G2E3Q7L622 706 aa21.15■□□□□ 0.98
YIPF3-205ENST00000460547 RPAP2Q8IXW5 612 aaPredicted RBP21.15■□□□□ 0.98
YIPF3-205ENST00000460547 ANKRD44Q8N8A2 993 aa21.15■□□□□ 0.98
YIPF3-205ENST00000460547 PRIM1P49642 420 aaKnown RBP21.15■□□□□ 0.98
YIPF3-205ENST00000460547 SBF2Q86WG5 1849 aa21.14■□□□□ 0.97
YIPF3-205ENST00000460547 PSDA5PKW4 1024 aaPredicted RBP21.14■□□□□ 0.97
YIPF3-205ENST00000460547 FLIIQ13045 1269 aa21.14■□□□□ 0.97
YIPF3-205ENST00000460547 C1orf141Q5JVX7 400 aa21.14■□□□□ 0.97
YIPF3-205ENST00000460547 LGR6Q9HBX8 967 aa21.14■□□□□ 0.97
YIPF3-205ENST00000460547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.14■□□□□ 0.97
YIPF3-205ENST00000460547 EIF4A1P60842 406 aaKnown RBP21.13■□□□□ 0.97
YIPF3-205ENST00000460547 SIPA1L3O60292 1781 aaPredicted RBP21.13■□□□□ 0.97
YIPF3-205ENST00000460547 RNMTO43148 476 aaKnown RBP21.12■□□□□ 0.97
YIPF3-205ENST00000460547 TEFQ10587 303 aa21.12■□□□□ 0.97
YIPF3-205ENST00000460547 R3HDM1Q15032 1099 aaKnown RBP21.12■□□□□ 0.97
YIPF3-205ENST00000460547 CYP27B1O15528 508 aa21.12■□□□□ 0.97
YIPF3-205ENST00000460547 TXNRD1Q16881 649 aa21.12■□□□□ 0.97
YIPF3-205ENST00000460547 CEP85Q6P2H3 762 aa21.12■□□□□ 0.97
YIPF3-205ENST00000460547 LNPKQ9C0E8 428 aa21.12■□□□□ 0.97
YIPF3-205ENST00000460547 DCTPP1Q9H773 170 aa21.12■□□□□ 0.97
YIPF3-205ENST00000460547 SEC24BO95487 1268 aa21.11■□□□□ 0.97
YIPF3-205ENST00000460547 MEIS3Q99687 375 aa21.11■□□□□ 0.97
YIPF3-205ENST00000460547 HDGFL1Q5TGJ6 251 aa21.1■□□□□ 0.97
YIPF3-205ENST00000460547 IFNL2Q8IZJ0 200 aa21.1■□□□□ 0.97
YIPF3-205ENST00000460547 PROM2Q8N271 834 aa21.1■□□□□ 0.97
YIPF3-205ENST00000460547 UPF2Q9HAU5 1272 aaKnown RBP21.1■□□□□ 0.97
YIPF3-205ENST00000460547 BMP2KLQ5H9B9 411 aa21.09■□□□□ 0.97
YIPF3-205ENST00000460547 ANKRD45Q5TZF3 282 aa21.09■□□□□ 0.97
YIPF3-205ENST00000460547 HEG1Q9ULI3 1381 aa21.08■□□□□ 0.97
YIPF3-205ENST00000460547 NHSQ6T4R5 1651 aa21.08■□□□□ 0.96
YIPF3-205ENST00000460547 FKBP5Q13451 457 aaPredicted RBP21.08■□□□□ 0.96
YIPF3-205ENST00000460547 MPRIPQ6WCQ1 1025 aa21.08■□□□□ 0.96
YIPF3-205ENST00000460547 TBC1D32Q96NH3 1257 aa21.08■□□□□ 0.96
YIPF3-205ENST00000460547 KAT6BQ8WYB5 2073 aa21.07■□□□□ 0.96
YIPF3-205ENST00000460547 PKD1L3Q7Z443 1732 aa21.07■□□□□ 0.96
YIPF3-205ENST00000460547 BTBD11A6QL63 1104 aa21.07■□□□□ 0.96
YIPF3-205ENST00000460547 F6X3S4 739 aa21.07■□□□□ 0.96
YIPF3-205ENST00000460547 PHKG2P15735 406 aa21.06■□□□□ 0.96
YIPF3-205ENST00000460547 NKX1-1Q15270 411 aaPredicted RBP21.06■□□□□ 0.96
YIPF3-205ENST00000460547 SLC4A10Q6U841 1118 aa21.05■□□□□ 0.96
YIPF3-205ENST00000460547 MRC1P22897 1456 aa21.05■□□□□ 0.96
YIPF3-205ENST00000460547 HMMRO75330 724 aa21.05■□□□□ 0.96
YIPF3-205ENST00000460547 GNAI3P08754 354 aa21.05■□□□□ 0.96
YIPF3-205ENST00000460547 SCN11AQ9UI33 1791 aa21.05■□□□□ 0.96
YIPF3-205ENST00000460547 SHANK3Q9BYB0 1731 aa21.04■□□□□ 0.96
YIPF3-205ENST00000460547 RREB1Q92766 1687 aa21.03■□□□□ 0.96
YIPF3-205ENST00000460547 GNAI2P04899 355 aa21.03■□□□□ 0.96
YIPF3-205ENST00000460547 STK32BQ9NY57 414 aa21.03■□□□□ 0.96
YIPF3-205ENST00000460547 KDM6AO15550 1401 aaPredicted RBP21.03■□□□□ 0.96
YIPF3-205ENST00000460547 HSP90AB1P08238 724 aaKnown RBP21.02■□□□□ 0.96
YIPF3-205ENST00000460547 SLC27A3Q5K4L6 730 aa21.02■□□□□ 0.96
YIPF3-205ENST00000460547 NECTIN2Q92692 538 aa21.02■□□□□ 0.96
YIPF3-205ENST00000460547 RGPD3A6NKT7 1758 aaPredicted RBP21.02■□□□□ 0.96
YIPF3-205ENST00000460547 RGPD4Q7Z3J3 1758 aa21.02■□□□□ 0.96
YIPF3-205ENST00000460547 KCNQ3O43525 872 aa21.02■□□□□ 0.95
YIPF3-205ENST00000460547 NUP188Q5SRE5 1749 aa21■□□□□ 0.95
YIPF3-205ENST00000460547 DOT1LQ8TEK3 1739 aa21■□□□□ 0.95
YIPF3-205ENST00000460547 ANO8Q9HCE9 1232 aaPredicted RBP21■□□□□ 0.95
YIPF3-205ENST00000460547 DAXXQ9UER7 740 aaPredicted RBP21■□□□□ 0.95
YIPF3-205ENST00000460547 BTAF1O14981 1849 aa21■□□□□ 0.95
YIPF3-205ENST00000460547 GIGYF1O75420 1035 aaPredicted RBP20.99■□□□□ 0.95
YIPF3-205ENST00000460547 SLC15A2Q16348 729 aa20.99■□□□□ 0.95
YIPF3-205ENST00000460547 DCAF5Q96JK2 942 aa20.99■□□□□ 0.95
YIPF3-205ENST00000460547 TMOD3Q9NYL9 352 aa20.99■□□□□ 0.95
YIPF3-205ENST00000460547 PIGBQ92521 554 aa20.99■□□□□ 0.95
YIPF3-205ENST00000460547 PHAXQ9H814 394 aaKnown RBP20.99■□□□□ 0.95
YIPF3-205ENST00000460547 LRRC4BQ9NT99 713 aa20.99■□□□□ 0.95
YIPF3-205ENST00000460547 CHPF2Q9P2E5 772 aa20.99■□□□□ 0.95
YIPF3-205ENST00000460547 DBF4Q9UBU7 674 aaPredicted RBP20.99■□□□□ 0.95
YIPF3-205ENST00000460547 SMARCC1Q92922 1105 aaPredicted RBP20.98■□□□□ 0.95
YIPF3-205ENST00000460547 CCNL1Q9UK58 526 aaPredicted RBP20.98■□□□□ 0.95
YIPF3-205ENST00000460547 EIF2S2P20042 333 aaKnown RBP20.97■□□□□ 0.95
YIPF3-205ENST00000460547 PLEKHM2Q8IWE5 1019 aa20.97■□□□□ 0.95
YIPF3-205ENST00000460547 SLC52A2Q9HAB3 445 aa20.97■□□□□ 0.95
YIPF3-205ENST00000460547 ERVV-2B6SEH9 535 aa20.96■□□□□ 0.95
YIPF3-205ENST00000460547 HMGB2P26583 209 aaKnown RBP20.96■□□□□ 0.95
YIPF3-205ENST00000460547 KCNQ4P56696 695 aa20.96■□□□□ 0.95
YIPF3-205ENST00000460547 USP44Q9H0E7 712 aa20.96■□□□□ 0.95
YIPF3-205ENST00000460547 BECN1Q14457 450 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms