RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 IL17REQ8NFR9 667 aa9.89□□□□□ -0.83
ABCA4-202ENST00000460514 YTHDC1Q96MU7 727 aaKnown RBP9.89□□□□□ -0.83
ABCA4-202ENST00000460514 BABAM1Q9NWV8 329 aa9.89□□□□□ -0.83
ABCA4-202ENST00000460514 SCN11AQ9UI33 1791 aa9.88□□□□□ -0.83
ABCA4-202ENST00000460514 ADAMTS7Q9UKP4 1686 aa9.88□□□□□ -0.83
ABCA4-202ENST00000460514 GNAI1P63096 354 aa9.88□□□□□ -0.83
ABCA4-202ENST00000460514 GOLGA2Q08379 1002 aa9.88□□□□□ -0.83
ABCA4-202ENST00000460514 TAF7Q15545 349 aaPredicted RBP9.88□□□□□ -0.83
ABCA4-202ENST00000460514 C3orf67Q6ZVT6 689 aa9.88□□□□□ -0.83
ABCA4-202ENST00000460514 IFNLR1Q8IU57 520 aaPredicted RBP9.88□□□□□ -0.83
ABCA4-202ENST00000460514 KLHL34Q8N239 644 aa9.88□□□□□ -0.83
ABCA4-202ENST00000460514 MYH16Q9H6N6 1097 aa9.88□□□□□ -0.83
ABCA4-202ENST00000460514 SLC52A2Q9HAB3 445 aa9.88□□□□□ -0.83
ABCA4-202ENST00000460514 LGR6Q9HBX8 967 aa9.88□□□□□ -0.83
ABCA4-202ENST00000460514 TMOD3Q9NYL9 352 aa9.88□□□□□ -0.83
ABCA4-202ENST00000460514 BRWD3Q6RI45 1802 aa9.88□□□□□ -0.83
ABCA4-202ENST00000460514 KDM6AO15550 1401 aaPredicted RBP9.88□□□□□ -0.83
ABCA4-202ENST00000460514 MRC1P22897 1456 aa9.87□□□□□ -0.83
ABCA4-202ENST00000460514 E9PSI1 815 aa9.87□□□□□ -0.83
ABCA4-202ENST00000460514 DCTN1Q14203 1278 aa9.87□□□□□ -0.83
ABCA4-202ENST00000460514 IFNL1Q8IU54 200 aa9.87□□□□□ -0.83
ABCA4-202ENST00000460514 SYTL4Q96C24 671 aaPredicted RBP9.87□□□□□ -0.83
ABCA4-202ENST00000460514 CFAP44Q96MT7 982 aa9.87□□□□□ -0.83
ABCA4-202ENST00000460514 IFT57Q9NWB7 429 aa9.87□□□□□ -0.83
ABCA4-202ENST00000460514 KAT6BQ8WYB5 2073 aa9.87□□□□□ -0.83
ABCA4-202ENST00000460514 VIRMAQ69YN4 1812 aaKnown RBP9.86□□□□□ -0.83
ABCA4-202ENST00000460514 ZNF521Q96K83 1311 aa9.86□□□□□ -0.83
ABCA4-202ENST00000460514 SENP3-EIF4A1A0A087X0R7 540 aa9.86□□□□□ -0.83
ABCA4-202ENST00000460514 BTBD11A6QL63 1104 aa9.86□□□□□ -0.83
ABCA4-202ENST00000460514 PRIM1P49642 420 aaKnown RBP9.86□□□□□ -0.83
ABCA4-202ENST00000460514 NFATC2IPQ8NCF5 419 aa9.86□□□□□ -0.83
ABCA4-202ENST00000460514 THUMPD2Q9BTF0 503 aaKnown RBP9.86□□□□□ -0.83
ABCA4-202ENST00000460514 LAS1LQ9Y4W2 734 aaKnown RBP9.86□□□□□ -0.83
ABCA4-202ENST00000460514 DOT1LQ8TEK3 1739 aa9.85□□□□□ -0.83
ABCA4-202ENST00000460514 TTC5Q8N0Z6 440 aa9.85□□□□□ -0.83
ABCA4-202ENST00000460514 SMARCC1Q92922 1105 aaPredicted RBP9.85□□□□□ -0.83
ABCA4-202ENST00000460514 ACSBG1Q96GR2 724 aa9.85□□□□□ -0.83
ABCA4-202ENST00000460514 TSPYL4Q9UJ04 414 aa9.85□□□□□ -0.83
ABCA4-202ENST00000460514 NHSQ6T4R5 1651 aa9.84□□□□□ -0.83
ABCA4-202ENST00000460514 CHL1O00533 1208 aa9.84□□□□□ -0.83
ABCA4-202ENST00000460514 HMGB2P26583 209 aaKnown RBP9.84□□□□□ -0.83
ABCA4-202ENST00000460514 FAM182BQ5T319 152 aa9.84□□□□□ -0.83
ABCA4-202ENST00000460514 CHMP4AQ9BY43 222 aa9.84□□□□□ -0.83
ABCA4-202ENST00000460514 BCL11BQ9C0K0 894 aaPredicted RBP9.84□□□□□ -0.83
ABCA4-202ENST00000460514 TOGARAM1Q9Y4F4 1720 aa9.84□□□□□ -0.83
ABCA4-202ENST00000460514 ITGB4P16144 1822 aa9.84□□□□□ -0.83
ABCA4-202ENST00000460514 ZNF853P0CG23 659 aa9.83□□□□□ -0.84
ABCA4-202ENST00000460514 SLFN5Q08AF3 891 aa9.83□□□□□ -0.84
ABCA4-202ENST00000460514 PIGBQ92521 554 aa9.83□□□□□ -0.84
ABCA4-202ENST00000460514 SIPA1L3O60292 1781 aaPredicted RBP9.83□□□□□ -0.84
ABCA4-202ENST00000460514 SBF2Q86WG5 1849 aa9.82□□□□□ -0.84
ABCA4-202ENST00000460514 SF3B2Q13435 895 aaKnown RBP9.82□□□□□ -0.84
ABCA4-202ENST00000460514 ZNF790Q6PG37 636 aa9.82□□□□□ -0.84
ABCA4-202ENST00000460514 FMNL2Q96PY5 1086 aa9.82□□□□□ -0.84
ABCA4-202ENST00000460514 SOS1Q07889 1333 aaPredicted RBP9.82□□□□□ -0.84
ABCA4-202ENST00000460514 KCNQ2O43526 872 aa9.81□□□□□ -0.84
ABCA4-202ENST00000460514 TRIM37O94972 964 aa9.81□□□□□ -0.84
ABCA4-202ENST00000460514 MBIPQ9NS73 344 aa9.81□□□□□ -0.84
ABCA4-202ENST00000460514 FANCIQ9NVI1 1328 aa9.81□□□□□ -0.84
ABCA4-202ENST00000460514 KDM3BQ7LBC6 1761 aa9.8□□□□□ -0.84
ABCA4-202ENST00000460514 CT47B1P0C2W7 299 aaPredicted RBP9.8□□□□□ -0.84
ABCA4-202ENST00000460514 SLC39A6Q13433 755 aa9.8□□□□□ -0.84
ABCA4-202ENST00000460514 CCDC125Q86Z20 511 aa9.8□□□□□ -0.84
ABCA4-202ENST00000460514 SPOCK2Q92563 424 aa9.8□□□□□ -0.84
ABCA4-202ENST00000460514 TEX13AQ9BXU3 409 aaPredicted RBP9.8□□□□□ -0.84
ABCA4-202ENST00000460514 ATG3Q9NT62 314 aa9.8□□□□□ -0.84
ABCA4-202ENST00000460514 MIS18AQ9NYP9 233 aa9.8□□□□□ -0.84
ABCA4-202ENST00000460514 BTAF1O14981 1849 aa9.79□□□□□ -0.84
ABCA4-202ENST00000460514 PAPPAQ13219 1627 aa9.79□□□□□ -0.84
ABCA4-202ENST00000460514 PALLDQ8WX93 1383 aa9.79□□□□□ -0.84
ABCA4-202ENST00000460514 HOXB7P09629 217 aa9.79□□□□□ -0.84
ABCA4-202ENST00000460514 SNRPA1P09661 255 aaKnown RBP9.79□□□□□ -0.84
ABCA4-202ENST00000460514 NUBP1P53384 320 aa9.79□□□□□ -0.84
ABCA4-202ENST00000460514 EIF4A1P60842 406 aaKnown RBP9.79□□□□□ -0.84
ABCA4-202ENST00000460514 DUSP27Q5VZP5 1158 aa9.79□□□□□ -0.84
ABCA4-202ENST00000460514 TRMT2AQ8IZ69 625 aaKnown RBP9.79□□□□□ -0.84
ABCA4-202ENST00000460514 VSIG10Q8N0Z9 540 aa9.79□□□□□ -0.84
ABCA4-202ENST00000460514 TSR2Q969E8 191 aaKnown RBP9.79□□□□□ -0.84
ABCA4-202ENST00000460514 CDCA7LQ96GN5 454 aa9.79□□□□□ -0.84
ABCA4-202ENST00000460514 ASAP1Q9ULH1 1129 aa9.79□□□□□ -0.84
ABCA4-202ENST00000460514 PTCD1O75127 700 aaKnown RBP9.78□□□□□ -0.84
ABCA4-202ENST00000460514 APBA3O96018 575 aa9.78□□□□□ -0.84
ABCA4-202ENST00000460514 BAG6P46379 1132 aa9.78□□□□□ -0.84
ABCA4-202ENST00000460514 ZNF428Q96B54 188 aa9.78□□□□□ -0.84
ABCA4-202ENST00000460514 HEG1Q9ULI3 1381 aa9.77□□□□□ -0.84
ABCA4-202ENST00000460514 LOC102724428A0A0B4J2F2 783 aa9.77□□□□□ -0.85
ABCA4-202ENST00000460514 PLSCR1O15162 318 aa9.77□□□□□ -0.85
ABCA4-202ENST00000460514 KCNQ3O43525 872 aa9.77□□□□□ -0.85
ABCA4-202ENST00000460514 STARD3NLO95772 234 aa9.77□□□□□ -0.85
ABCA4-202ENST00000460514 PTGER2P43116 358 aa9.77□□□□□ -0.85
ABCA4-202ENST00000460514 SIK1P57059 783 aa9.77□□□□□ -0.85
ABCA4-202ENST00000460514 EXOSC9Q06265 439 aaKnown RBP9.77□□□□□ -0.85
ABCA4-202ENST00000460514 TWISTNBQ3B726 338 aaPredicted RBP9.77□□□□□ -0.85
ABCA4-202ENST00000460514 SLC27A3Q5K4L6 730 aa9.77□□□□□ -0.85
ABCA4-202ENST00000460514 ZNF496Q96IT1 587 aaPredicted RBP9.77□□□□□ -0.85
ABCA4-202ENST00000460514 UBR2Q8IWV8 1755 aa9.77□□□□□ -0.85
ABCA4-202ENST00000460514 KCPQ6ZWJ8 1503 aa9.77□□□□□ -0.85
ABCA4-202ENST00000460514 GIGYF1O75420 1035 aaPredicted RBP9.76□□□□□ -0.85
ABCA4-202ENST00000460514 CENPBP07199 599 aaPredicted RBP9.76□□□□□ -0.85
ABCA4-202ENST00000460514 ATP6V1AP38606 617 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms