RNA–Protein interactions for RNA: ENST00000459988.1

UBAP2-208, Transcript of ubiquitin associated protein 2, human

TSL 2

Gene UBAP2, Length 2,628 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBAP2-208	ENST00000459988	MKRN4P	Q13434	485 aa	Predicted RBP	8.93	□□□□□ -0.98
UBAP2-208	ENST00000459988	NKX1-1	Q15270	411 aa	Predicted RBP	8.93	□□□□□ -0.98
UBAP2-208	ENST00000459988	KCNH5	Q8NCM2	988 aa		8.93	□□□□□ -0.98
UBAP2-208	ENST00000459988	SMARCC1	Q92922	1105 aa	Predicted RBP	8.93	□□□□□ -0.98
UBAP2-208	ENST00000459988	MINK1	Q8N4C8	1332 aa	Predicted RBP	8.93	□□□□□ -0.98
UBAP2-208	ENST00000459988	NUTM2F	A1L443	756 aa		8.93	□□□□□ -0.98
UBAP2-208	ENST00000459988	RGL3	Q3MIN7	710 aa		8.93	□□□□□ -0.98
UBAP2-208	ENST00000459988	PRKRIP1	Q9H875	184 aa	Predicted RBP	8.93	□□□□□ -0.98
UBAP2-208	ENST00000459988	ADGRB1	O14514	1584 aa		8.93	□□□□□ -0.98
UBAP2-208	ENST00000459988	CCDC88A	Q3V6T2	1871 aa		8.92	□□□□□ -0.98
UBAP2-208	ENST00000459988	TLL2	Q9Y6L7	1015 aa		8.92	□□□□□ -0.98
UBAP2-208	ENST00000459988	IL2RB	P14784	551 aa		8.92	□□□□□ -0.98
UBAP2-208	ENST00000459988	GPR101	Q96P66	508 aa	Predicted RBP	8.92	□□□□□ -0.98
UBAP2-208	ENST00000459988	FER1L6	Q2WGJ9	1857 aa		8.91	□□□□□ -0.98
UBAP2-208	ENST00000459988	RGPD5	Q99666	1765 aa		8.91	□□□□□ -0.98
UBAP2-208	ENST00000459988	ACE	P12821	1306 aa		8.91	□□□□□ -0.98
UBAP2-208	ENST00000459988	ST20-MTHFS	A0A0A6YYL1	179 aa		8.91	□□□□□ -0.98
UBAP2-208	ENST00000459988	WASL	O00401	505 aa	Predicted RBP	8.91	□□□□□ -0.98
UBAP2-208	ENST00000459988	GTPBP6	O43824	516 aa	Predicted RBP	8.91	□□□□□ -0.98
UBAP2-208	ENST00000459988	PAK3	O75914	559 aa	Predicted RBP	8.91	□□□□□ -0.98
UBAP2-208	ENST00000459988	AKAP4	Q5JQC9	854 aa		8.91	□□□□□ -0.98
UBAP2-208	ENST00000459988	STXBP5L	Q9Y2K9	1186 aa		8.91	□□□□□ -0.98
UBAP2-208	ENST00000459988	NRXN2	Q9P2S2	1712 aa		8.91	□□□□□ -0.98
UBAP2-208	ENST00000459988	DPEP1	P16444	411 aa		8.9	□□□□□ -0.98
UBAP2-208	ENST00000459988	CAPN2	P17655	700 aa		8.9	□□□□□ -0.98
UBAP2-208	ENST00000459988	PUS7	Q96PZ0	661 aa	Known RBP	8.9	□□□□□ -0.98
UBAP2-208	ENST00000459988	C14orf93	Q9H972	538 aa	Known RBP	8.9	□□□□□ -0.98
UBAP2-208	ENST00000459988	SLC24A3	Q9HC58	644 aa		8.9	□□□□□ -0.98
UBAP2-208	ENST00000459988	MSL1	Q68DK7	614 aa		8.9	□□□□□ -0.98
UBAP2-208	ENST00000459988	ZC3H15	Q8WU90	426 aa	Known RBP	8.9	□□□□□ -0.98
UBAP2-208	ENST00000459988	SYMPK	Q92797	1274 aa	Known RBP	8.9	□□□□□ -0.98
UBAP2-208	ENST00000459988	ERBB4	Q15303	1308 aa		8.89	□□□□□ -0.99
UBAP2-208	ENST00000459988	MAP2	P11137	1827 aa	Known RBP	8.89	□□□□□ -0.99
UBAP2-208	ENST00000459988	APBB1	O00213	710 aa		8.89	□□□□□ -0.99
UBAP2-208	ENST00000459988	NBPF1	Q3BBV0	1214 aa		8.89	□□□□□ -0.99
UBAP2-208	ENST00000459988	TAF7L	Q5H9L4	462 aa		8.89	□□□□□ -0.99
UBAP2-208	ENST00000459988	AK7	Q96M32	723 aa		8.89	□□□□□ -0.99
UBAP2-208	ENST00000459988	LAMB4	A4D0S4	1761 aa		8.89	□□□□□ -0.99
UBAP2-208	ENST00000459988	NFAT5	O94916	1531 aa		8.89	□□□□□ -0.99
UBAP2-208	ENST00000459988	KCNA3	P22001	575 aa		8.89	□□□□□ -0.99
UBAP2-208	ENST00000459988	COL25A1	Q9BXS0	654 aa	Predicted RBP	8.89	□□□□□ -0.99
UBAP2-208	ENST00000459988	CGNL1	Q0VF96	1302 aa		8.89	□□□□□ -0.99
UBAP2-208	ENST00000459988	ZNF219	Q9P2Y4	722 aa	Predicted RBP	8.88	□□□□□ -0.99
UBAP2-208	ENST00000459988	CASP8AP2	Q9UKL3	1982 aa		8.88	□□□□□ -0.99
UBAP2-208	ENST00000459988	AKAP11	Q9UKA4	1901 aa		8.88	□□□□□ -0.99
UBAP2-208	ENST00000459988	HPS5	Q9UPZ3	1129 aa		8.88	□□□□□ -0.99
UBAP2-208	ENST00000459988	BCOR	Q6W2J9	1755 aa		8.88	□□□□□ -0.99
UBAP2-208	ENST00000459988	NOG	Q13253	232 aa		8.87	□□□□□ -0.99
UBAP2-208	ENST00000459988	RGS22	Q8NE09	1264 aa		8.87	□□□□□ -0.99
UBAP2-208	ENST00000459988	KTN1	Q86UP2	1357 aa	Known RBP	8.87	□□□□□ -0.99
UBAP2-208	ENST00000459988	ARHGEF25	Q86VW2	580 aa		8.86	□□□□□ -0.99
UBAP2-208	ENST00000459988	TESK2	Q96S53	571 aa		8.86	□□□□□ -0.99
UBAP2-208	ENST00000459988	TAF1D	Q9H5J8	278 aa	Predicted RBP	8.86	□□□□□ -0.99
UBAP2-208	ENST00000459988	COL9A1	P20849	921 aa		8.86	□□□□□ -0.99
UBAP2-208	ENST00000459988	SOGA3	Q5TF21	947 aa		8.86	□□□□□ -0.99
UBAP2-208	ENST00000459988	ACSBG1	Q96GR2	724 aa		8.86	□□□□□ -0.99
UBAP2-208	ENST00000459988	CABP2	Q9NPB3	220 aa		8.86	□□□□□ -0.99
UBAP2-208	ENST00000459988	ABTB2	Q8N961	1025 aa		8.85	□□□□□ -0.99
UBAP2-208	ENST00000459988	CCDC184	Q52MB2	194 aa		8.85	□□□□□ -0.99
UBAP2-208	ENST00000459988	FBXO46	Q6PJ61	603 aa	Predicted RBP	8.85	□□□□□ -0.99
UBAP2-208	ENST00000459988	CCDC136	Q96JN2	1154 aa		8.85	□□□□□ -0.99
UBAP2-208	ENST00000459988	ZNF692	Q9BU19	519 aa	Predicted RBP	8.85	□□□□□ -0.99
UBAP2-208	ENST00000459988	ABT1	Q9ULW3	272 aa	Known RBP	8.85	□□□□□ -0.99
UBAP2-208	ENST00000459988	PARP3	Q9Y6F1	533 aa		8.85	□□□□□ -0.99
UBAP2-208	ENST00000459988	MAP3K19	Q56UN5	1328 aa		8.85	□□□□□ -0.99
UBAP2-208	ENST00000459988	TNRC18	O15417	2968 aa	Predicted RBP	8.85	□□□□□ -0.99
UBAP2-208	ENST00000459988	OTUD5	Q96G74	571 aa		8.84	□□□□□ -0.99
UBAP2-208	ENST00000459988	BRPF3	Q9ULD4	1205 aa		8.84	□□□□□ -0.99
UBAP2-208	ENST00000459988	HMGB1	P09429	215 aa	Known RBP	8.84	□□□□□ -0.99
UBAP2-208	ENST00000459988	MRS2	Q9HD23	443 aa		8.84	□□□□□ -0.99
UBAP2-208	ENST00000459988	DDX21	Q9NR30	783 aa	Known RBP eCLIP	8.84	□□□□□ -0.99
UBAP2-208	ENST00000459988		A0A0G2JLW4	131 aa		8.84	□□□□□ -1
UBAP2-208	ENST00000459988	MMP10	P09238	476 aa		8.84	□□□□□ -1
UBAP2-208	ENST00000459988	STK26	Q9P289	416 aa		8.84	□□□□□ -1
UBAP2-208	ENST00000459988	FOXK2	Q01167	660 aa		8.83	□□□□□ -1
UBAP2-208	ENST00000459988	PRAM1	Q96QH2	718 aa		8.83	□□□□□ -1
UBAP2-208	ENST00000459988	POGK	Q9P215	609 aa		8.83	□□□□□ -1
UBAP2-208	ENST00000459988	COLQ	Q9Y215	455 aa	Predicted RBP	8.83	□□□□□ -1
UBAP2-208	ENST00000459988	TMF1	P82094	1093 aa		8.83	□□□□□ -1
UBAP2-208	ENST00000459988	HNRNPU	Q00839	825 aa	Known RBP eCLIP	8.83	□□□□□ -1
UBAP2-208	ENST00000459988	SUPT16H	Q9Y5B9	1047 aa	Known RBP	8.83	□□□□□ -1
UBAP2-208	ENST00000459988	AEBP1	Q8IUX7	1158 aa		8.82	□□□□□ -1
UBAP2-208	ENST00000459988	KCNV2	Q8TDN2	545 aa		8.82	□□□□□ -1
UBAP2-208	ENST00000459988	HACL1	Q9UJ83	578 aa		8.82	□□□□□ -1
UBAP2-208	ENST00000459988	COL5A3	P25940	1745 aa	Predicted RBP	8.82	□□□□□ -1
UBAP2-208	ENST00000459988	CSB-PGBD3	P0DP91	1061 aa		8.81	□□□□□ -1
UBAP2-208	ENST00000459988	RALBP1	Q15311	655 aa		8.81	□□□□□ -1
UBAP2-208	ENST00000459988	RC3H1	Q5TC82	1133 aa	Known RBP	8.81	□□□□□ -1
UBAP2-208	ENST00000459988	NUDT16	Q96DE0	195 aa	Known RBP	8.81	□□□□□ -1
UBAP2-208	ENST00000459988	CCDC61	Q9Y6R9	512 aa		8.81	□□□□□ -1
UBAP2-208	ENST00000459988	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	8.81	□□□□□ -1
UBAP2-208	ENST00000459988	CNTROB	Q8N137	903 aa		8.81	□□□□□ -1
UBAP2-208	ENST00000459988	ADGRF5	Q8IZF2	1346 aa		8.81	□□□□□ -1
UBAP2-208	ENST00000459988	TTC21A	Q8NDW8	1320 aa		8.81	□□□□□ -1
UBAP2-208	ENST00000459988	PALLD	Q8WX93	1383 aa		8.81	□□□□□ -1
UBAP2-208	ENST00000459988	PRO3102	Q9H379	93 aa		8.8	□□□□□ -1
UBAP2-208	ENST00000459988	ZBED9	Q6R2W3	1325 aa		8.8	□□□□□ -1
UBAP2-208	ENST00000459988	PAPPA2	Q9BXP8	1791 aa		8.8	□□□□□ -1
UBAP2-208	ENST00000459988	PER1	O15534	1290 aa	Predicted RBP	8.8	□□□□□ -1
UBAP2-208	ENST00000459988	MYBBP1A	Q9BQG0	1328 aa	Known RBP	8.8	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms