RNA–Protein interactions for RNA: ENST00000459850.5

ABCA2-208, Transcript of ATP binding cassette subfamily A member 2, human

TSL 1 (best)

Gene ABCA2, Length 8,073 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-208	ENST00000459850	ACTN2	P35609	894 aa		13.99	□□□□□ -0.17
ABCA2-208	ENST00000459850	PRPF4B	Q13523	1007 aa	Known RBP	13.99	□□□□□ -0.17
ABCA2-208	ENST00000459850	AACS	Q86V21	672 aa		13.99	□□□□□ -0.17
ABCA2-208	ENST00000459850	CDCA7L	Q96GN5	454 aa		13.99	□□□□□ -0.17
ABCA2-208	ENST00000459850	KLHL10	Q6JEL2	608 aa		13.99	□□□□□ -0.17
ABCA2-208	ENST00000459850	PDE3A	Q14432	1141 aa		13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	MAP9	Q49MG5	647 aa		13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	CASQ1	P31415	396 aa		13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	CEP135	Q66GS9	1140 aa		13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	DAAM2	Q86T65	1068 aa		13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	SPECC1	Q5M775	1068 aa		13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	BIN2	Q9UBW5	565 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	MRC2	Q9UBG0	1479 aa		13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	SNX16	P57768	344 aa		13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	C6orf163	Q5TEZ5	329 aa		13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	SMTNL1	A8MU46	457 aa		13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	STARD3NL	O95772	234 aa		13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	KRT85	P78386	507 aa		13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	LARP1B	Q659C4	914 aa	Known RBP	13.98	□□□□□ -0.17
ABCA2-208	ENST00000459850	KIAA1107	Q9UPP5	1409 aa		13.97	□□□□□ -0.17
ABCA2-208	ENST00000459850	MYO1B	O43795	1136 aa		13.97	□□□□□ -0.17
ABCA2-208	ENST00000459850	NLRP5	P59047	1200 aa		13.97	□□□□□ -0.17
ABCA2-208	ENST00000459850	CFAP100	Q494V2	611 aa		13.97	□□□□□ -0.17
ABCA2-208	ENST00000459850	WDR63	Q8IWG1	891 aa		13.97	□□□□□ -0.17
ABCA2-208	ENST00000459850	PPP1R9B	Q96SB3	815 aa		13.97	□□□□□ -0.17
ABCA2-208	ENST00000459850	RBM10	P98175	930 aa	Known RBP	13.97	□□□□□ -0.17
ABCA2-208	ENST00000459850	CTNNA3	Q9UI47	895 aa		13.97	□□□□□ -0.17
ABCA2-208	ENST00000459850	POGZ	Q7Z3K3	1410 aa		13.96	□□□□□ -0.17
ABCA2-208	ENST00000459850	WDR33	Q9C0J8	1336 aa	Known RBP	13.96	□□□□□ -0.17
ABCA2-208	ENST00000459850	KIF20A	O95235	890 aa		13.96	□□□□□ -0.17
ABCA2-208	ENST00000459850	SATB1	Q01826	763 aa		13.96	□□□□□ -0.17
ABCA2-208	ENST00000459850	MAP7D1	Q3KQU3	841 aa		13.96	□□□□□ -0.17
ABCA2-208	ENST00000459850	RNF187	Q5TA31	235 aa	Predicted RBP	13.96	□□□□□ -0.17
ABCA2-208	ENST00000459850	ANKLE2	Q86XL3	938 aa		13.96	□□□□□ -0.17
ABCA2-208	ENST00000459850		A0A1W2PRG0	241 aa		13.96	□□□□□ -0.17
ABCA2-208	ENST00000459850	LAMC3	Q9Y6N6	1575 aa		13.96	□□□□□ -0.17
ABCA2-208	ENST00000459850	TTC21A	Q8NDW8	1320 aa		13.96	□□□□□ -0.17
ABCA2-208	ENST00000459850	PRC1	O43663	620 aa		13.96	□□□□□ -0.17
ABCA2-208	ENST00000459850	BAG4	O95429	457 aa	Known RBP	13.96	□□□□□ -0.17
ABCA2-208	ENST00000459850	SPATA32	Q96LK8	384 aa		13.96	□□□□□ -0.17
ABCA2-208	ENST00000459850	METTL24	Q5JXM2	366 aa		13.96	□□□□□ -0.18
ABCA2-208	ENST00000459850	ALS2CR12	Q96Q35	445 aa		13.96	□□□□□ -0.18
ABCA2-208	ENST00000459850	UPF3B	Q9BZI7	483 aa	Known RBP	13.96	□□□□□ -0.18
ABCA2-208	ENST00000459850	MMRN2	Q9H8L6	949 aa		13.96	□□□□□ -0.18
ABCA2-208	ENST00000459850	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.96	□□□□□ -0.18
ABCA2-208	ENST00000459850	TIAM1	Q13009	1591 aa		13.96	□□□□□ -0.18
ABCA2-208	ENST00000459850	TDRD12	Q587J7	1177 aa	Known RBP	13.95	□□□□□ -0.18
ABCA2-208	ENST00000459850	SMC1B	Q8NDV3	1235 aa		13.95	□□□□□ -0.18
ABCA2-208	ENST00000459850	TPD52	P55327	224 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCA2-208	ENST00000459850	SLF2	Q8IX21	1173 aa		13.95	□□□□□ -0.18
ABCA2-208	ENST00000459850	TTC36	A6NLP5	189 aa		13.95	□□□□□ -0.18
ABCA2-208	ENST00000459850	BBX	Q8WY36	941 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCA2-208	ENST00000459850	PDRG1	Q9NUG6	133 aa		13.95	□□□□□ -0.18
ABCA2-208	ENST00000459850	CCDC160	A6NGH7	325 aa		13.95	□□□□□ -0.18
ABCA2-208	ENST00000459850	MXRA7	P84157	204 aa		13.95	□□□□□ -0.18
ABCA2-208	ENST00000459850	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCA2-208	ENST00000459850	SLC12A5	Q9H2X9	1139 aa		13.95	□□□□□ -0.18
ABCA2-208	ENST00000459850	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.95	□□□□□ -0.18	4e-7	■□□□□ 8.9
ABCA2-208	ENST00000459850	PRDM11	Q9NQV5	511 aa		13.95	□□□□□ -0.18
ABCA2-208	ENST00000459850	BCAR3	O75815	825 aa		13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	DPH6	Q7L8W6	267 aa		13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	MPND	Q8N594	471 aa		13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850		K7ELQ4	463 aa	Predicted RBP	13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	SIRT1	Q96EB6	747 aa		13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	NCBP1	Q09161	790 aa	Known RBP	13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	PLS1	Q14651	629 aa		13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	TCERG1L	Q5VWI1	586 aa		13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	NAP1L3	Q99457	506 aa	Predicted RBP	13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	PAIP2	Q9BPZ3	127 aa	Known RBP	13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	CCDC174	Q6PII3	467 aa		13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850		V9GYY5	206 aa	Predicted RBP	13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	IFT140	Q96RY7	1462 aa		13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	MCM3	P25205	808 aa		13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	CHD1L	Q86WJ1	897 aa		13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	NUP88	Q99567	741 aa	Predicted RBP	13.94	□□□□□ -0.18
ABCA2-208	ENST00000459850	CEP126	Q9P2H0	1117 aa		13.93	□□□□□ -0.18
ABCA2-208	ENST00000459850	PRKCSH	P14314	528 aa	Predicted RBP	13.93	□□□□□ -0.18
ABCA2-208	ENST00000459850	KIF5C	O60282	957 aa		13.93	□□□□□ -0.18
ABCA2-208	ENST00000459850	BLOC1S2	Q6QNY1	142 aa		13.93	□□□□□ -0.18
ABCA2-208	ENST00000459850	DDX11	Q96FC9	970 aa		13.93	□□□□□ -0.18
ABCA2-208	ENST00000459850	HAUS7	Q99871	368 aa		13.93	□□□□□ -0.18
ABCA2-208	ENST00000459850	SRGAP3	O43295	1099 aa		13.93	□□□□□ -0.18
ABCA2-208	ENST00000459850	MVP	Q14764	893 aa	Known RBP	13.93	□□□□□ -0.18
ABCA2-208	ENST00000459850	NBPF1	Q3BBV0	1214 aa		13.93	□□□□□ -0.18
ABCA2-208	ENST00000459850	SLC52A1	Q9NWF4	448 aa		13.93	□□□□□ -0.18
ABCA2-208	ENST00000459850	CWC27	Q6UX04	472 aa	Known RBP	13.93	□□□□□ -0.18
ABCA2-208	ENST00000459850	RRS1	Q15050	365 aa	Known RBP	13.92	□□□□□ -0.18
ABCA2-208	ENST00000459850	ATP2B3	Q16720	1220 aa		13.92	□□□□□ -0.18
ABCA2-208	ENST00000459850	ATF7IP	Q6VMQ6	1270 aa		13.92	□□□□□ -0.18
ABCA2-208	ENST00000459850	RANBP6	O60518	1105 aa	Known RBP	13.92	□□□□□ -0.18
ABCA2-208	ENST00000459850	CCDC63	Q8NA47	563 aa		13.92	□□□□□ -0.18
ABCA2-208	ENST00000459850	GNAT3	A8MTJ3	354 aa		13.92	□□□□□ -0.18
ABCA2-208	ENST00000459850	SLC4A8	Q2Y0W8	1093 aa		13.92	□□□□□ -0.18
ABCA2-208	ENST00000459850	STXBP4	Q6ZWJ1	553 aa		13.92	□□□□□ -0.18
ABCA2-208	ENST00000459850	ATAD2	Q6PL18	1390 aa		13.92	□□□□□ -0.18
ABCA2-208	ENST00000459850	KRT32	Q14532	448 aa		13.92	□□□□□ -0.18
ABCA2-208	ENST00000459850	IQCG	Q9H095	443 aa	Known RBP	13.92	□□□□□ -0.18
ABCA2-208	ENST00000459850	CCDC144CP	Q8IYA2	1237 aa		13.91	□□□□□ -0.18

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