RNA–Protein interactions for RNA: ENST00000456095.6

PUF60-204, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5 BASIC

Gene PUF60, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-204ENST00000456095 STARD3NLO95772 234 aa16.94■□□□□ 0.3
PUF60-204ENST00000456095 ZNF496Q96IT1 587 aaPredicted RBP16.93■□□□□ 0.3
PUF60-204ENST00000456095 MCM10Q7L590 875 aa16.93■□□□□ 0.3
PUF60-204ENST00000456095 KCPQ6ZWJ8 1503 aa16.93■□□□□ 0.3
PUF60-204ENST00000456095 TJP1Q07157 1748 aa16.92■□□□□ 0.3
PUF60-204ENST00000456095 CICQ96RK0 1608 aaPredicted RBP16.92■□□□□ 0.3
PUF60-204ENST00000456095 ZPR1O75312 459 aa16.92■□□□□ 0.3
PUF60-204ENST00000456095 FMNL2Q96PY5 1086 aa16.92■□□□□ 0.3
PUF60-204ENST00000456095 GRIN3BO60391 1043 aa16.91■□□□□ 0.3
PUF60-204ENST00000456095 NFE2L2Q16236 605 aa16.91■□□□□ 0.3
PUF60-204ENST00000456095 SRP68Q9UHB9 627 aaKnown RBP16.91■□□□□ 0.3
PUF60-204ENST00000456095 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
PUF60-204ENST00000456095 PARP3Q9Y6F1 533 aa16.91■□□□□ 0.3
PUF60-204ENST00000456095 SOS1Q07889 1333 aaPredicted RBP16.91■□□□□ 0.3
PUF60-204ENST00000456095 USP42Q9H9J4 1324 aaKnown RBP16.91■□□□□ 0.3
PUF60-204ENST00000456095 APAF1O14727 1248 aa16.9■□□□□ 0.3
PUF60-204ENST00000456095 RIPK4P57078 832 aa16.9■□□□□ 0.3
PUF60-204ENST00000456095 HEG1Q9ULI3 1381 aa16.9■□□□□ 0.3
PUF60-204ENST00000456095 DCTN1Q14203 1278 aa16.9■□□□□ 0.3
PUF60-204ENST00000456095 ZBTB1Q9Y2K1 713 aa16.9■□□□□ 0.3
PUF60-204ENST00000456095 KCNQ3O43525 872 aa16.89■□□□□ 0.29
PUF60-204ENST00000456095 CANXP27824 592 aaKnown RBP16.89■□□□□ 0.29
PUF60-204ENST00000456095 TMPOP42166 694 aaKnown RBP16.89■□□□□ 0.29
PUF60-204ENST00000456095 FKBP8Q14318 412 aa16.89■□□□□ 0.29
PUF60-204ENST00000456095 TAF7Q15545 349 aaPredicted RBP16.89■□□□□ 0.29
PUF60-204ENST00000456095 YBX3P16989 372 aaKnown RBP eCLIP16.88■□□□□ 0.293e-7■■□□□ 14
PUF60-204ENST00000456095 USPL1Q5W0Q7 1092 aa16.88■□□□□ 0.29
PUF60-204ENST00000456095 NARFQ9UHQ1 456 aa16.88■□□□□ 0.29
PUF60-204ENST00000456095 SIPA1L3O60292 1781 aaPredicted RBP16.88■□□□□ 0.29
PUF60-204ENST00000456095 UBR2Q8IWV8 1755 aa16.88■□□□□ 0.29
PUF60-204ENST00000456095 A0A087WZG4 1122 aa16.87■□□□□ 0.29
PUF60-204ENST00000456095 TGFB2P61812 414 aa16.87■□□□□ 0.29
PUF60-204ENST00000456095 TM4SF1P30408 202 aa16.87■□□□□ 0.29
PUF60-204ENST00000456095 EIF5P55010 431 aaKnown RBP16.87■□□□□ 0.29
PUF60-204ENST00000456095 COL15A1P39059 1388 aa16.86■□□□□ 0.29
PUF60-204ENST00000456095 THUMPD2Q9BTF0 503 aaKnown RBP16.86■□□□□ 0.29
PUF60-204ENST00000456095 CHD4Q14839 1912 aa16.86■□□□□ 0.29
PUF60-204ENST00000456095 DLG5Q8TDM6 1919 aa16.86■□□□□ 0.29
PUF60-204ENST00000456095 SNRPA1P09661 255 aaKnown RBP16.85■□□□□ 0.29
PUF60-204ENST00000456095 LMOD3Q0VAK6 560 aa16.85■□□□□ 0.29
PUF60-204ENST00000456095 NPM2Q86SE8 214 aaKnown RBP16.85■□□□□ 0.29
PUF60-204ENST00000456095 C4AP0C0L4 1744 aa16.85■□□□□ 0.29
PUF60-204ENST00000456095 IL6STP40189 918 aaPredicted RBP16.84■□□□□ 0.29
PUF60-204ENST00000456095 USP16Q9Y5T5 823 aa16.84■□□□□ 0.29
PUF60-204ENST00000456095 A1BGP04217 495 aa16.84■□□□□ 0.29
PUF60-204ENST00000456095 A0A0G2JLW4 131 aa16.83■□□□□ 0.28
PUF60-204ENST00000456095 DDR1Q08345 913 aa16.83■□□□□ 0.28
PUF60-204ENST00000456095 MIS18AQ9NYP9 233 aa16.83■□□□□ 0.28
PUF60-204ENST00000456095 POLRMTO00411 1230 aaKnown RBP16.82■□□□□ 0.28
PUF60-204ENST00000456095 ZNF330Q9Y3S2 320 aaPredicted RBP16.82■□□□□ 0.28
PUF60-204ENST00000456095 LAS1LQ9Y4W2 734 aaKnown RBP16.82■□□□□ 0.28
PUF60-204ENST00000456095 NFIXQ14938 502 aa16.82■□□□□ 0.28
PUF60-204ENST00000456095 BCL2L12Q9HB09 334 aa16.82■□□□□ 0.28
PUF60-204ENST00000456095 C10orf71Q711Q0 1435 aa16.81■□□□□ 0.28
PUF60-204ENST00000456095 WWC3Q9ULE0 1092 aa16.81■□□□□ 0.28
PUF60-204ENST00000456095 TBC1D2BQ9UPU7 963 aa16.81■□□□□ 0.28
PUF60-204ENST00000456095 PRAMEF22A3QJZ6 481 aa16.8■□□□□ 0.28
PUF60-204ENST00000456095 DPEP1P16444 411 aa16.8■□□□□ 0.28
PUF60-204ENST00000456095 ZNF784Q8NCA9 323 aaPredicted RBP16.8■□□□□ 0.28
PUF60-204ENST00000456095 UTRNP46939 3433 aa16.8■□□□□ 0.28
PUF60-204ENST00000456095 TRIM35Q9UPQ4 493 aa16.79■□□□□ 0.28
PUF60-204ENST00000456095 KIF13BQ9NQT8 1826 aa16.79■□□□□ 0.28
PUF60-204ENST00000456095 SERPINB2P05120 415 aa16.79■□□□□ 0.28
PUF60-204ENST00000456095 PXDNLA1KZ92 1463 aa16.78■□□□□ 0.28
PUF60-204ENST00000456095 BCS1LQ9Y276 419 aa16.78■□□□□ 0.28
PUF60-204ENST00000456095 KCNA3P22001 575 aa16.77■□□□□ 0.28
PUF60-204ENST00000456095 BICDL1Q6ZP65 573 aa16.77■□□□□ 0.28
PUF60-204ENST00000456095 DZIP3Q86Y13 1208 aaKnown RBP16.77■□□□□ 0.28
PUF60-204ENST00000456095 PIM2Q9P1W9 311 aa16.77■□□□□ 0.28
PUF60-204ENST00000456095 GOLGB1Q14789 3259 aaKnown RBP16.76■□□□□ 0.27
PUF60-204ENST00000456095 GIGYF1O75420 1035 aaPredicted RBP16.76■□□□□ 0.27
PUF60-204ENST00000456095 PIP4K2AP48426 406 aaPredicted RBP16.76■□□□□ 0.27
PUF60-204ENST00000456095 EIF4A1P60842 406 aaKnown RBP16.76■□□□□ 0.27
PUF60-204ENST00000456095 HNRNPUQ00839 825 aaKnown RBP eCLIP16.76■□□□□ 0.27
PUF60-204ENST00000456095 CAMTA2O94983 1202 aa16.76■□□□□ 0.27
PUF60-204ENST00000456095 TBC1D9BQ66K14 1250 aa16.76■□□□□ 0.27
PUF60-204ENST00000456095 BABAM1Q9NWV8 329 aa16.76■□□□□ 0.27
PUF60-204ENST00000456095 N4BP2Q86UW6 1770 aaPredicted RBP16.75■□□□□ 0.27
PUF60-204ENST00000456095 NBPF26B4DH59 902 aa16.75■□□□□ 0.27
PUF60-204ENST00000456095 NBPF10Q6P3W6 841 aaKnown RBP16.75■□□□□ 0.27
PUF60-204ENST00000456095 WWC1Q8IX03 1113 aa16.75■□□□□ 0.27
PUF60-204ENST00000456095 NBPF15Q8N660 670 aa16.75■□□□□ 0.27
PUF60-204ENST00000456095 SETDB2Q96T68 719 aa16.75■□□□□ 0.27
PUF60-204ENST00000456095 TSPYL4Q9UJ04 414 aa16.75■□□□□ 0.27
PUF60-204ENST00000456095 CALD1Q05682 793 aaKnown RBP16.74■□□□□ 0.27
PUF60-204ENST00000456095 CLEC4GQ6UXB4 293 aa16.74■□□□□ 0.27
PUF60-204ENST00000456095 CHRNA5P30532 468 aa16.73■□□□□ 0.27
PUF60-204ENST00000456095 DALRD3Q5D0E6 543 aaKnown RBP16.73■□□□□ 0.27
PUF60-204ENST00000456095 ARHGAP27Q6ZUM4 889 aa16.73■□□□□ 0.27
PUF60-204ENST00000456095 KIAA1551Q9HCM1 1747 aa16.72■□□□□ 0.27
PUF60-204ENST00000456095 YTHDC1Q96MU7 727 aaKnown RBP16.72■□□□□ 0.27
PUF60-204ENST00000456095 ZNF652Q9Y2D9 606 aa16.72■□□□□ 0.27
PUF60-204ENST00000456095 RGL2O15211 777 aa16.71■□□□□ 0.27
PUF60-204ENST00000456095 CCDC27Q2M243 656 aa16.71■□□□□ 0.27
PUF60-204ENST00000456095 AFDNP55196 1824 aaKnown RBP16.71■□□□□ 0.27
PUF60-204ENST00000456095 H0YIN7 160 aa16.7■□□□□ 0.26
PUF60-204ENST00000456095 BRIP1Q9BX63 1249 aa16.7■□□□□ 0.26
PUF60-204ENST00000456095 PDZRN3Q9UPQ7 1066 aa16.7■□□□□ 0.26
PUF60-204ENST00000456095 CARMIL3Q8ND23 1372 aa16.7■□□□□ 0.26
PUF60-204ENST00000456095 KDM3BQ7LBC6 1761 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms