RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 COL15A1P39059 1388 aa27■■□□□ 1.91
TNRC18-208ENST00000455076 ZNF316A6NFI3 1004 aaPredicted RBP26.99■■□□□ 1.91
TNRC18-208ENST00000455076 MMP10P09238 476 aa26.99■■□□□ 1.91
TNRC18-208ENST00000455076 KLHL34Q8N239 644 aa26.99■■□□□ 1.91
TNRC18-208ENST00000455076 KCNQ3O43525 872 aa26.98■■□□□ 1.91
TNRC18-208ENST00000455076 TAF7Q15545 349 aaPredicted RBP26.98■■□□□ 1.91
TNRC18-208ENST00000455076 C10orf71Q711Q0 1435 aa26.97■■□□□ 1.91
TNRC18-208ENST00000455076 EIF5P55010 431 aaKnown RBP26.96■■□□□ 1.91
TNRC18-208ENST00000455076 PNISRQ8TF01 805 aaKnown RBP26.95■■□□□ 1.9
TNRC18-208ENST00000455076 SRP68Q9UHB9 627 aaKnown RBP26.95■■□□□ 1.9
TNRC18-208ENST00000455076 NARFQ9UHQ1 456 aa26.95■■□□□ 1.9
TNRC18-208ENST00000455076 KIAA1551Q9HCM1 1747 aa26.95■■□□□ 1.9
TNRC18-208ENST00000455076 LAMB4A4D0S4 1761 aa26.94■■□□□ 1.9
TNRC18-208ENST00000455076 SCN7AQ01118 1682 aa26.94■■□□□ 1.9
TNRC18-208ENST00000455076 WDR43Q15061 677 aaKnown RBP eCLIP26.93■■□□□ 1.9
TNRC18-208ENST00000455076 SNRPA1P09661 255 aaKnown RBP26.92■■□□□ 1.9
TNRC18-208ENST00000455076 IL6STP40189 918 aaPredicted RBP26.92■■□□□ 1.9
TNRC18-208ENST00000455076 TMPOP42166 694 aaKnown RBP26.92■■□□□ 1.9
TNRC18-208ENST00000455076 FKBP8Q14318 412 aa26.92■■□□□ 1.9
TNRC18-208ENST00000455076 CHD4Q14839 1912 aa26.92■■□□□ 1.9
TNRC18-208ENST00000455076 ZPR1O75312 459 aa26.91■■□□□ 1.9
TNRC18-208ENST00000455076 A0A087WZG4 1122 aa26.9■■□□□ 1.9
TNRC18-208ENST00000455076 CANXP27824 592 aaKnown RBP26.9■■□□□ 1.9
TNRC18-208ENST00000455076 LMOD3Q0VAK6 560 aa26.9■■□□□ 1.9
TNRC18-208ENST00000455076 USPL1Q5W0Q7 1092 aa26.9■■□□□ 1.9
TNRC18-208ENST00000455076 RUNDC1Q96C34 613 aa26.9■■□□□ 1.9
TNRC18-208ENST00000455076 NRXN2Q9P2S2 1712 aa26.9■■□□□ 1.9
TNRC18-208ENST00000455076 TM4SF1P30408 202 aa26.89■■□□□ 1.9
TNRC18-208ENST00000455076 RIPK4P57078 832 aa26.89■■□□□ 1.9
TNRC18-208ENST00000455076 ADAMTS8Q9UP79 889 aa26.89■■□□□ 1.9
TNRC18-208ENST00000455076 PARP3Q9Y6F1 533 aa26.89■■□□□ 1.9
TNRC18-208ENST00000455076 PXDNLA1KZ92 1463 aa26.88■■□□□ 1.89
TNRC18-208ENST00000455076 DDR1Q08345 913 aa26.88■■□□□ 1.89
TNRC18-208ENST00000455076 THUMPD2Q9BTF0 503 aaKnown RBP26.88■■□□□ 1.89
TNRC18-208ENST00000455076 BCL2L12Q9HB09 334 aa26.88■■□□□ 1.89
TNRC18-208ENST00000455076 USP16Q9Y5T5 823 aa26.88■■□□□ 1.89
TNRC18-208ENST00000455076 BCORQ6W2J9 1755 aa26.88■■□□□ 1.89
TNRC18-208ENST00000455076 GPR162Q16538 588 aa26.87■■□□□ 1.89
TNRC18-208ENST00000455076 BABAM1Q9NWV8 329 aa26.87■■□□□ 1.89
TNRC18-208ENST00000455076 PRAMEF22A3QJZ6 481 aa26.86■■□□□ 1.89
TNRC18-208ENST00000455076 POLRMTO00411 1230 aaKnown RBP26.86■■□□□ 1.89
TNRC18-208ENST00000455076 A1BGP04217 495 aa26.85■■□□□ 1.89
TNRC18-208ENST00000455076 TGFB2P61812 414 aa26.85■■□□□ 1.89
TNRC18-208ENST00000455076 CCDC146Q8IYE0 955 aa26.85■■□□□ 1.89
TNRC18-208ENST00000455076 MIS18AQ9NYP9 233 aa26.85■■□□□ 1.89
TNRC18-208ENST00000455076 YBX3P16989 372 aaKnown RBP eCLIP26.84■■□□□ 1.89
TNRC18-208ENST00000455076 EIF4A1P60842 406 aaKnown RBP26.84■■□□□ 1.89
TNRC18-208ENST00000455076 BRCA1P38398 1863 aaKnown RBP26.84■■□□□ 1.89
TNRC18-208ENST00000455076 AFDNP55196 1824 aaKnown RBP26.83■■□□□ 1.89
TNRC18-208ENST00000455076 GRIN3BO60391 1043 aa26.83■■□□□ 1.89
TNRC18-208ENST00000455076 YY1P25490 414 aa26.83■■□□□ 1.89
TNRC18-208ENST00000455076 GIGYF1O75420 1035 aaPredicted RBP26.82■■□□□ 1.88
TNRC18-208ENST00000455076 NFIXQ14938 502 aa26.82■■□□□ 1.88
TNRC18-208ENST00000455076 TRIM35Q9UPQ4 493 aa26.81■■□□□ 1.88
TNRC18-208ENST00000455076 N4BP2Q86UW6 1770 aaPredicted RBP26.81■■□□□ 1.88
TNRC18-208ENST00000455076 RGL2O15211 777 aa26.8■■□□□ 1.88
TNRC18-208ENST00000455076 CAMTA2O94983 1202 aa26.79■■□□□ 1.88
TNRC18-208ENST00000455076 RRP7AQ9Y3A4 280 aaKnown RBP26.79■■□□□ 1.88
TNRC18-208ENST00000455076 NBPF26B4DH59 902 aa26.78■■□□□ 1.88
TNRC18-208ENST00000455076 NBPF10Q6P3W6 841 aaKnown RBP26.78■■□□□ 1.88
TNRC18-208ENST00000455076 PELP1Q8IZL8 1130 aaKnown RBP26.78■■□□□ 1.88
TNRC18-208ENST00000455076 NBPF15Q8N660 670 aa26.78■■□□□ 1.88
TNRC18-208ENST00000455076 TSPYL4Q9UJ04 414 aa26.78■■□□□ 1.88
TNRC18-208ENST00000455076 TBC1D2BQ9UPU7 963 aa26.77■■□□□ 1.88
TNRC18-208ENST00000455076 NPM2Q86SE8 214 aaKnown RBP26.76■■□□□ 1.87
TNRC18-208ENST00000455076 DZIP3Q86Y13 1208 aaKnown RBP26.76■■□□□ 1.87
TNRC18-208ENST00000455076 ERBB4Q15303 1308 aa26.75■■□□□ 1.87
TNRC18-208ENST00000455076 ZNF330Q9Y3S2 320 aaPredicted RBP26.75■■□□□ 1.87
TNRC18-208ENST00000455076 CHL1O00533 1208 aa26.74■■□□□ 1.87
TNRC18-208ENST00000455076 ANP32CO43423 234 aa26.74■■□□□ 1.87
TNRC18-208ENST00000455076 CCDC184Q52MB2 194 aa26.74■■□□□ 1.87
TNRC18-208ENST00000455076 CLEC4GQ6UXB4 293 aa26.74■■□□□ 1.87
TNRC18-208ENST00000455076 CARMIL3Q8ND23 1372 aa26.73■■□□□ 1.87
TNRC18-208ENST00000455076 SERPINB2P05120 415 aa26.73■■□□□ 1.87
TNRC18-208ENST00000455076 PIP4K2AP48426 406 aaPredicted RBP26.73■■□□□ 1.87
TNRC18-208ENST00000455076 NEUROD2Q15784 382 aa26.73■■□□□ 1.87
TNRC18-208ENST00000455076 TBC1D9BQ66K14 1250 aa26.73■■□□□ 1.87
TNRC18-208ENST00000455076 DLEC1Q9Y238 1755 aa26.73■■□□□ 1.87
TNRC18-208ENST00000455076 ARFGEF1Q9Y6D6 1849 aa26.72■■□□□ 1.87
TNRC18-208ENST00000455076 DPEP1P16444 411 aa26.72■■□□□ 1.87
TNRC18-208ENST00000455076 KCNA3P22001 575 aa26.72■■□□□ 1.87
TNRC18-208ENST00000455076 A0A0G2JLW4 131 aa26.71■■□□□ 1.87
TNRC18-208ENST00000455076 APAF1O14727 1248 aa26.69■■□□□ 1.86
TNRC18-208ENST00000455076 ZNF652Q9Y2D9 606 aa26.69■■□□□ 1.86
TNRC18-208ENST00000455076 ANKRD31Q8N7Z5 1873 aa26.68■■□□□ 1.86
TNRC18-208ENST00000455076 CFAP44Q96MT7 982 aa26.67■■□□□ 1.86
TNRC18-208ENST00000455076 BICDL1Q6ZP65 573 aa26.66■■□□□ 1.86
TNRC18-208ENST00000455076 LRP10Q7Z4F1 713 aa26.66■■□□□ 1.86
TNRC18-208ENST00000455076 SETDB2Q96T68 719 aa26.66■■□□□ 1.86
TNRC18-208ENST00000455076 ZNF853P0CG23 659 aa26.65■■□□□ 1.86
TNRC18-208ENST00000455076 NCBP3Q53F19 620 aaKnown RBP26.65■■□□□ 1.86
TNRC18-208ENST00000455076 PRR5LQ6MZQ0 368 aa26.65■■□□□ 1.86
TNRC18-208ENST00000455076 PIM2Q9P1W9 311 aa26.65■■□□□ 1.86
TNRC18-208ENST00000455076 ERVV-1B6SEH8 477 aa26.64■■□□□ 1.86
TNRC18-208ENST00000455076 HOXB7P09629 217 aa26.64■■□□□ 1.86
TNRC18-208ENST00000455076 MRS2Q9HD23 443 aa26.64■■□□□ 1.86
TNRC18-208ENST00000455076 PDZRN3Q9UPQ7 1066 aa26.64■■□□□ 1.86
TNRC18-208ENST00000455076 ATP10DQ9P241 1426 aa26.64■■□□□ 1.85
TNRC18-208ENST00000455076 NUP98P52948 1817 aa26.63■■□□□ 1.85
TNRC18-208ENST00000455076 ADCY9O60503 1353 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms