RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 MFAP1P55081 439 aaKnown RBP13.15□□□□□ -0.3
GTF3C2-206ENST00000454704 SLC15A2Q16348 729 aa13.15□□□□□ -0.3
GTF3C2-206ENST00000454704 INTS3Q68E01 1043 aaKnown RBP13.15□□□□□ -0.3
GTF3C2-206ENST00000454704 BTAF1O14981 1849 aa13.15□□□□□ -0.3
GTF3C2-206ENST00000454704 PAPPAQ13219 1627 aa13.15□□□□□ -0.3
GTF3C2-206ENST00000454704 HMOX1P09601 288 aa13.14□□□□□ -0.31
GTF3C2-206ENST00000454704 RPAP2Q8IXW5 612 aaPredicted RBP13.14□□□□□ -0.31
GTF3C2-206ENST00000454704 KAT6BQ8WYB5 2073 aa13.14□□□□□ -0.31
GTF3C2-206ENST00000454704 SLKQ9H2G2 1235 aaPredicted RBP13.13□□□□□ -0.31
GTF3C2-206ENST00000454704 CDC45O75419 566 aa13.13□□□□□ -0.31
GTF3C2-206ENST00000454704 IL2RBP14784 551 aa13.13□□□□□ -0.31
GTF3C2-206ENST00000454704 MCM4P33991 863 aa13.13□□□□□ -0.31
GTF3C2-206ENST00000454704 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
GTF3C2-206ENST00000454704 ANKRD24Q8TF21 1146 aa13.13□□□□□ -0.31
GTF3C2-206ENST00000454704 LNPKQ9C0E8 428 aa13.13□□□□□ -0.31
GTF3C2-206ENST00000454704 MTFR1LQ9H019 292 aa13.13□□□□□ -0.31
GTF3C2-206ENST00000454704 RTL1A6NKG5 1358 aa13.13□□□□□ -0.31
GTF3C2-206ENST00000454704 CHL1O00533 1208 aa13.12□□□□□ -0.31
GTF3C2-206ENST00000454704 FHDC1Q9C0D6 1143 aaPredicted RBP13.12□□□□□ -0.31
GTF3C2-206ENST00000454704 FAM208AQ9UK61 1670 aaKnown RBP13.11□□□□□ -0.31
GTF3C2-206ENST00000454704 KDRP35968 1356 aa13.11□□□□□ -0.31
GTF3C2-206ENST00000454704 HTATSF1O43719 755 aaKnown RBP13.11□□□□□ -0.31
GTF3C2-206ENST00000454704 ANKRD45Q5TZF3 282 aa13.11□□□□□ -0.31
GTF3C2-206ENST00000454704 DCTPP1Q9H773 170 aa13.11□□□□□ -0.31
GTF3C2-206ENST00000454704 FLT4P35916 1363 aa13.1□□□□□ -0.31
GTF3C2-206ENST00000454704 DDIT3P35638 169 aa13.1□□□□□ -0.31
GTF3C2-206ENST00000454704 EIF4A2Q14240 407 aaKnown RBP13.1□□□□□ -0.31
GTF3C2-206ENST00000454704 ZNF827Q17R98 1081 aa13.1□□□□□ -0.31
GTF3C2-206ENST00000454704 TSPYL6Q8N831 410 aa13.1□□□□□ -0.31
GTF3C2-206ENST00000454704 ANKRD44Q8N8A2 993 aa13.1□□□□□ -0.31
GTF3C2-206ENST00000454704 SGIP1Q9BQI5 828 aa13.1□□□□□ -0.31
GTF3C2-206ENST00000454704 SYT17Q9BSW7 474 aa13.1□□□□□ -0.31
GTF3C2-206ENST00000454704 SKOR2Q2VWA4 1001 aaPredicted RBP13.09□□□□□ -0.31
GTF3C2-206ENST00000454704 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
GTF3C2-206ENST00000454704 GBP4Q96PP9 640 aa13.09□□□□□ -0.31
GTF3C2-206ENST00000454704 BABAM1Q9NWV8 329 aa13.09□□□□□ -0.31
GTF3C2-206ENST00000454704 ATP10DQ9P241 1426 aa13.09□□□□□ -0.31
GTF3C2-206ENST00000454704 PXDNLA1KZ92 1463 aa13.09□□□□□ -0.31
GTF3C2-206ENST00000454704 HMMRO75330 724 aa13.08□□□□□ -0.32
GTF3C2-206ENST00000454704 CASC1Q6TDU7 716 aa13.08□□□□□ -0.32
GTF3C2-206ENST00000454704 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.32
GTF3C2-206ENST00000454704 TUBGCP6Q96RT7 1819 aa13.08□□□□□ -0.32
GTF3C2-206ENST00000454704 RRS1Q15050 365 aaKnown RBP13.07□□□□□ -0.32
GTF3C2-206ENST00000454704 ZNF784Q8NCA9 323 aaPredicted RBP13.07□□□□□ -0.32
GTF3C2-206ENST00000454704 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
GTF3C2-206ENST00000454704 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
GTF3C2-206ENST00000454704 ARXQ96QS3 562 aa13.07□□□□□ -0.32
GTF3C2-206ENST00000454704 LRRC4BQ9NT99 713 aa13.07□□□□□ -0.32
GTF3C2-206ENST00000454704 CHD4Q14839 1912 aa13.07□□□□□ -0.32
GTF3C2-206ENST00000454704 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
GTF3C2-206ENST00000454704 CCT4P50991 539 aaKnown RBP13.06□□□□□ -0.32
GTF3C2-206ENST00000454704 RABEP1Q15276 862 aa13.06□□□□□ -0.32
GTF3C2-206ENST00000454704 SULT6B1Q6IMI4 303 aa13.06□□□□□ -0.32
GTF3C2-206ENST00000454704 SIRT2Q8IXJ6 389 aa13.06□□□□□ -0.32
GTF3C2-206ENST00000454704 DDX54Q8TDD1 881 aaKnown RBP13.06□□□□□ -0.32
GTF3C2-206ENST00000454704 THUMPD2Q9BTF0 503 aaKnown RBP13.06□□□□□ -0.32
GTF3C2-206ENST00000454704 CHMP4AQ9BY43 222 aa13.06□□□□□ -0.32
GTF3C2-206ENST00000454704 DOT1LQ8TEK3 1739 aa13.06□□□□□ -0.32
GTF3C2-206ENST00000454704 QSER1Q2KHR3 1735 aa13.05□□□□□ -0.32
GTF3C2-206ENST00000454704 SHANK3Q9BYB0 1731 aa13.05□□□□□ -0.32
GTF3C2-206ENST00000454704 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
GTF3C2-206ENST00000454704 TBC1D9Q6ZT07 1266 aa13.05□□□□□ -0.32
GTF3C2-206ENST00000454704 IP6K1Q92551 441 aa13.05□□□□□ -0.32
GTF3C2-206ENST00000454704 RGPD2P0DJD1 1756 aa13.05□□□□□ -0.32
GTF3C2-206ENST00000454704 GOLGB1Q14789 3259 aaKnown RBP13.05□□□□□ -0.32
GTF3C2-206ENST00000454704 MAP3K5Q99683 1374 aa13.05□□□□□ -0.32
GTF3C2-206ENST00000454704 FSD2A1L4K1 749 aa13.05□□□□□ -0.32
GTF3C2-206ENST00000454704 GOLGA6L3A6NEY3 463 aa13.05□□□□□ -0.32
GTF3C2-206ENST00000454704 TTC22Q5TAA0 569 aa13.05□□□□□ -0.32
GTF3C2-206ENST00000454704 CLEC17AQ6ZS10 378 aa13.05□□□□□ -0.32
GTF3C2-206ENST00000454704 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
GTF3C2-206ENST00000454704 RAB3GAP1Q15042 981 aa13.04□□□□□ -0.32
GTF3C2-206ENST00000454704 PLEKHM2Q8IWE5 1019 aa13.04□□□□□ -0.32
GTF3C2-206ENST00000454704 RTF1Q92541 710 aaKnown RBP13.04□□□□□ -0.32
GTF3C2-206ENST00000454704 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
GTF3C2-206ENST00000454704 SYTL4Q96C24 671 aaPredicted RBP13.04□□□□□ -0.32
GTF3C2-206ENST00000454704 MAP3K19Q56UN5 1328 aa13.04□□□□□ -0.32
GTF3C2-206ENST00000454704 MEGF6O75095 1541 aa13.03□□□□□ -0.32
GTF3C2-206ENST00000454704 GOLGA6L22H0YM25 854 aa13.03□□□□□ -0.32
GTF3C2-206ENST00000454704 TRAK2O60296 914 aa13.03□□□□□ -0.32
GTF3C2-206ENST00000454704 FBLN1P23142 703 aa13.03□□□□□ -0.32
GTF3C2-206ENST00000454704 MRE11P49959 708 aa13.03□□□□□ -0.32
GTF3C2-206ENST00000454704 KCNQ4P56696 695 aa13.03□□□□□ -0.32
GTF3C2-206ENST00000454704 SLC27A3Q5K4L6 730 aa13.03□□□□□ -0.32
GTF3C2-206ENST00000454704 CEP85Q6P2H3 762 aa13.03□□□□□ -0.32
GTF3C2-206ENST00000454704 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
GTF3C2-206ENST00000454704 OSBPL3Q9H4L5 887 aa13.03□□□□□ -0.32
GTF3C2-206ENST00000454704 LY75O60449 1722 aa13.02□□□□□ -0.32
GTF3C2-206ENST00000454704 EPB41L2O43491 1005 aaKnown RBP13.02□□□□□ -0.33
GTF3C2-206ENST00000454704 HOXC9P31274 260 aa13.02□□□□□ -0.33
GTF3C2-206ENST00000454704 KIF2CQ99661 725 aa13.02□□□□□ -0.33
GTF3C2-206ENST00000454704 BRPF3Q9ULD4 1205 aa13.02□□□□□ -0.33
GTF3C2-206ENST00000454704 PNPLA7Q6ZV29 1317 aa13.02□□□□□ -0.33
GTF3C2-206ENST00000454704 IBTKQ9P2D0 1353 aaPredicted RBP13.02□□□□□ -0.33
GTF3C2-206ENST00000454704 COL24A1Q17RW2 1714 aa13.01□□□□□ -0.33
GTF3C2-206ENST00000454704 ELL2O00472 640 aaPredicted RBP13.01□□□□□ -0.33
GTF3C2-206ENST00000454704 REC8O95072 547 aa13.01□□□□□ -0.33
GTF3C2-206ENST00000454704 AMPHP49418 695 aa13.01□□□□□ -0.33
GTF3C2-206ENST00000454704 PRIM1P49642 420 aaKnown RBP13.01□□□□□ -0.33
GTF3C2-206ENST00000454704 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms