RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CNTNAP3Q9BZ76 1288 aa7.73□□□□□ -1.17
LINC00393-202ENST00000452852 IQSEC3Q9UPP2 1182 aaPredicted RBP7.73□□□□□ -1.17
LINC00393-202ENST00000452852 USP3Q9Y6I4 520 aa7.73□□□□□ -1.17
LINC00393-202ENST00000452852 EPHA4P54764 986 aa7.72□□□□□ -1.17
LINC00393-202ENST00000452852 LARP1Q6PKG0 1096 aaKnown RBP7.72□□□□□ -1.17
LINC00393-202ENST00000452852 SV2AQ7L0J3 742 aa7.72□□□□□ -1.17
LINC00393-202ENST00000452852 TNS4Q8IZW8 715 aa7.72□□□□□ -1.17
LINC00393-202ENST00000452852 NIFKQ9BYG3 293 aaKnown RBP7.72□□□□□ -1.17
LINC00393-202ENST00000452852 KRTAP9-6A0A140TA67 174 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 A0A1B0GTH6 734 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 F11P03951 625 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 PLA2G4AP47712 749 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 PTK7Q13308 1070 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 DBN1Q16643 649 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 CDCA8Q53HL2 280 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 ZNF295-AS1Q8N0V1 137 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 GPAMQ9HCL2 828 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 SCHIP1Q9P0W5 487 aaPredicted RBP7.71□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L15C9J2P7 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L10C9JJH3 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L13C9JLJ4 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L12C9JPN9 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L11C9JVI0 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L21D6R901 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L18D6R9N7 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L22D6RA61 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L17D6RBQ6 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L19D6RCP7 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L20D6RJB6 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L24Q0WX57 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 TBCELQ5QJ74 424 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 TRIM22Q8IYM9 498 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 CABP1Q9NZU7 370 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 RBM19Q9Y4C8 960 aaKnown RBP7.7□□□□□ -1.18
LINC00393-202ENST00000452852 NACADO15069 1562 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 FAM196BA6NMK8 535 aa7.69□□□□□ -1.18
LINC00393-202ENST00000452852 H7C1W4 665 aa7.69□□□□□ -1.18
LINC00393-202ENST00000452852 M0R2N6 131 aa7.69□□□□□ -1.18
LINC00393-202ENST00000452852 MSX1P28360 303 aa7.69□□□□□ -1.18
LINC00393-202ENST00000452852 DPYDQ12882 1025 aa7.69□□□□□ -1.18
LINC00393-202ENST00000452852 SLC9A9Q8IVB4 645 aa7.69□□□□□ -1.18
LINC00393-202ENST00000452852 TSEN2Q8NCE0 465 aaKnown RBP7.69□□□□□ -1.18
LINC00393-202ENST00000452852 ZNF837Q96EG3 531 aaPredicted RBP7.69□□□□□ -1.18
LINC00393-202ENST00000452852 SEC13P55735 322 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 ZNF385CQ66K41 422 aaPredicted RBP7.68□□□□□ -1.18
LINC00393-202ENST00000452852 KRTAP1-3Q8IUG1 177 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 ANKMY2Q8IV38 441 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 CCDC82Q8N4S0 544 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 GALNT6Q8NCL4 622 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 AIDAQ96BJ3 306 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 CCDC97Q96F63 343 aaPredicted RBP7.68□□□□□ -1.18
LINC00393-202ENST00000452852 GMCL1Q96IK5 515 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 COL25A1Q9BXS0 654 aaPredicted RBP7.68□□□□□ -1.18
LINC00393-202ENST00000452852 SERPINA10Q9UK55 444 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 PARP3Q9Y6F1 533 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 THBS1P07996 1170 aa7.67□□□□□ -1.18
LINC00393-202ENST00000452852 KRT76Q01546 638 aa7.67□□□□□ -1.18
LINC00393-202ENST00000452852 ZDHHC1Q8WTX9 485 aa7.67□□□□□ -1.18
LINC00393-202ENST00000452852 GTPBP3Q969Y2 492 aaKnown RBP7.67□□□□□ -1.18
LINC00393-202ENST00000452852 NUCKS1Q9H1E3 243 aaKnown RBP7.67□□□□□ -1.18
LINC00393-202ENST00000452852 TSPAN10Q9H1Z9 355 aaPredicted RBP7.67□□□□□ -1.18
LINC00393-202ENST00000452852 RUBCNLQ9H714 662 aa7.67□□□□□ -1.18
LINC00393-202ENST00000452852 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.66□□□□□ -1.18
LINC00393-202ENST00000452852 GPR25O00155 361 aa7.66□□□□□ -1.18
LINC00393-202ENST00000452852 NOS2P35228 1153 aa7.66□□□□□ -1.18
LINC00393-202ENST00000452852 RNFT1Q5M7Z0 435 aa7.66□□□□□ -1.18
LINC00393-202ENST00000452852 Q8N3U1 123 aa7.66□□□□□ -1.18
LINC00393-202ENST00000452852 LGR5O75473 907 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 CSB-PGBD3P0DP91 1061 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 ATP4AP20648 1035 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 SRPK2P78362 688 aaKnown RBP7.65□□□□□ -1.18
LINC00393-202ENST00000452852 TEAD4Q15561 434 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 PGBD3Q8N328 593 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 L3MBTL2Q969R5 705 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 HINFPQ9BQA5 517 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 TXLNAP40222 546 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 NBPF1Q3BBV0 1214 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 SH3PXD2AQ5TCZ1 1133 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 FOXR1Q6PIV2 292 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 C1orf216Q8TAB5 229 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 SPOCK3Q9BQ16 436 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 ZNF232Q9UNY5 417 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 ATAD2Q6PL18 1390 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 SERTM1A2A2V5 107 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 K7ELQ4 463 aaPredicted RBP7.63□□□□□ -1.19
LINC00393-202ENST00000452852 C21orf2O43822 256 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 PSMA6P60900 246 aaKnown RBP7.63□□□□□ -1.19
LINC00393-202ENST00000452852 GAS6Q14393 721 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 EFHC2Q5JST6 749 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 FAM200AQ8TCP9 573 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 SCG3Q8WXD2 468 aaKnown RBP7.63□□□□□ -1.19
LINC00393-202ENST00000452852 CRISPLD1Q9H336 500 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 ZDHHC3Q9NYG2 299 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 UNC13AQ9UPW8 1703 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 PPP1R12BO60237 982 aaPredicted RBP7.62□□□□□ -1.19
LINC00393-202ENST00000452852 PDIA4P13667 645 aaKnown RBP7.62□□□□□ -1.19
LINC00393-202ENST00000452852 TATP17735 454 aaPredicted RBP7.62□□□□□ -1.19
LINC00393-202ENST00000452852 UBAP2LQ14157 1087 aaKnown RBP7.62□□□□□ -1.19
LINC00393-202ENST00000452852 LBRQ14739 615 aaKnown RBP7.62□□□□□ -1.19
LINC00393-202ENST00000452852 PLA2G4EQ3MJ16 856 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms