RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 ZBED9Q6R2W3 1325 aa18.93■□□□□ 0.62
TRAPPC12-211ENST00000452495 FANCIQ9NVI1 1328 aa18.93■□□□□ 0.62
TRAPPC12-211ENST00000452495 BCORQ6W2J9 1755 aa18.92■□□□□ 0.62
TRAPPC12-211ENST00000452495 GIGYF1O75420 1035 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC12-211ENST00000452495 STARD3NLO95772 234 aa18.92■□□□□ 0.62
TRAPPC12-211ENST00000452495 HOXB7P09629 217 aa18.92■□□□□ 0.62
TRAPPC12-211ENST00000452495 ZNF827Q17R98 1081 aa18.92■□□□□ 0.62
TRAPPC12-211ENST00000452495 RC3H1Q5TC82 1133 aaKnown RBP18.92■□□□□ 0.62
TRAPPC12-211ENST00000452495 AK7Q96M32 723 aa18.92■□□□□ 0.62
TRAPPC12-211ENST00000452495 SOS1Q07889 1333 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC12-211ENST00000452495 SCN7AQ01118 1682 aa18.92■□□□□ 0.62
TRAPPC12-211ENST00000452495 E9PSI1 815 aa18.91■□□□□ 0.62
TRAPPC12-211ENST00000452495 CYP19A1P11511 503 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC12-211ENST00000452495 SLC15A2Q16348 729 aa18.91■□□□□ 0.62
TRAPPC12-211ENST00000452495 TSR2Q969E8 191 aaKnown RBP18.91■□□□□ 0.62
TRAPPC12-211ENST00000452495 CRKLP46109 303 aaKnown RBP18.9■□□□□ 0.62
TRAPPC12-211ENST00000452495 CCDC87Q9NVE4 849 aa18.9■□□□□ 0.62
TRAPPC12-211ENST00000452495 COL24A1Q17RW2 1714 aa18.9■□□□□ 0.62
TRAPPC12-211ENST00000452495 ERBB4Q15303 1308 aa18.89■□□□□ 0.61
TRAPPC12-211ENST00000452495 PRAMEF22A3QJZ6 481 aa18.88■□□□□ 0.61
TRAPPC12-211ENST00000452495 GNPATO15228 680 aa18.88■□□□□ 0.61
TRAPPC12-211ENST00000452495 SPINK5Q9NQ38 1064 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC12-211ENST00000452495 SSFA2P28290 1259 aa18.87■□□□□ 0.61
TRAPPC12-211ENST00000452495 SLFN5Q08AF3 891 aa18.87■□□□□ 0.61
TRAPPC12-211ENST00000452495 INTS5Q6P9B9 1019 aaKnown RBP18.87■□□□□ 0.61
TRAPPC12-211ENST00000452495 TFCP2L1Q9NZI6 479 aa18.87■□□□□ 0.61
TRAPPC12-211ENST00000452495 USP16Q9Y5T5 823 aa18.87■□□□□ 0.61
TRAPPC12-211ENST00000452495 KRT24Q2M2I5 525 aa18.86■□□□□ 0.61
TRAPPC12-211ENST00000452495 DUSP27Q5VZP5 1158 aa18.86■□□□□ 0.61
TRAPPC12-211ENST00000452495 FLAD1Q8NFF5 587 aa18.86■□□□□ 0.61
TRAPPC12-211ENST00000452495 CHMP4AQ9BY43 222 aa18.86■□□□□ 0.61
TRAPPC12-211ENST00000452495 RTCBQ9Y3I0 505 aaKnown RBP18.86■□□□□ 0.61
TRAPPC12-211ENST00000452495 COL15A1P39059 1388 aa18.85■□□□□ 0.61
TRAPPC12-211ENST00000452495 PNPLA7Q6ZV29 1317 aa18.85■□□□□ 0.61
TRAPPC12-211ENST00000452495 RPS6KA4O75676 772 aa18.85■□□□□ 0.61
TRAPPC12-211ENST00000452495 ZBTB1Q9Y2K1 713 aa18.85■□□□□ 0.61
TRAPPC12-211ENST00000452495 R3HDM1Q15032 1099 aaKnown RBP18.84■□□□□ 0.61
TRAPPC12-211ENST00000452495 IL6STP40189 918 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC12-211ENST00000452495 TWISTNBQ3B726 338 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC12-211ENST00000452495 HDGFL1Q5TGJ6 251 aa18.83■□□□□ 0.6
TRAPPC12-211ENST00000452495 TRMT2AQ8IZ69 625 aaKnown RBP18.83■□□□□ 0.6
TRAPPC12-211ENST00000452495 C8orf58Q8NAV2 365 aa18.83■□□□□ 0.6
TRAPPC12-211ENST00000452495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.82■□□□□ 0.6
TRAPPC12-211ENST00000452495 CDCA7LQ96GN5 454 aa18.82■□□□□ 0.6
TRAPPC12-211ENST00000452495 ANKRD36CQ5JPF3 1778 aa18.82■□□□□ 0.6
TRAPPC12-211ENST00000452495 NUP98P52948 1817 aa18.81■□□□□ 0.6
TRAPPC12-211ENST00000452495 ARFGEF2Q9Y6D5 1785 aa18.81■□□□□ 0.6
TRAPPC12-211ENST00000452495 PHF14O94880 888 aa18.81■□□□□ 0.6
TRAPPC12-211ENST00000452495 A1BGP04217 495 aa18.81■□□□□ 0.6
TRAPPC12-211ENST00000452495 CANXP27824 592 aaKnown RBP18.81■□□□□ 0.6
TRAPPC12-211ENST00000452495 EIF5P55010 431 aaKnown RBP18.81■□□□□ 0.6
TRAPPC12-211ENST00000452495 EXOSC9Q06265 439 aaKnown RBP18.81■□□□□ 0.6
TRAPPC12-211ENST00000452495 AMIGO3Q86WK7 504 aa18.81■□□□□ 0.6
TRAPPC12-211ENST00000452495 TSPYL6Q8N831 410 aa18.81■□□□□ 0.6
TRAPPC12-211ENST00000452495 PSDA5PKW4 1024 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC12-211ENST00000452495 EIF2S2P20042 333 aaKnown RBP18.8■□□□□ 0.6
TRAPPC12-211ENST00000452495 TRAPPC3LQ5T215 181 aa18.8■□□□□ 0.6
TRAPPC12-211ENST00000452495 LRP5O75197 1615 aa18.79■□□□□ 0.6
TRAPPC12-211ENST00000452495 A0A087WZG4 1122 aa18.79■□□□□ 0.6
TRAPPC12-211ENST00000452495 NBPF26B4DH59 902 aa18.79■□□□□ 0.6
TRAPPC12-211ENST00000452495 ELL2O00472 640 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC12-211ENST00000452495 CCDC30Q5VVM6 783 aa18.79■□□□□ 0.6
TRAPPC12-211ENST00000452495 NBPF10Q6P3W6 841 aaKnown RBP18.79■□□□□ 0.6
TRAPPC12-211ENST00000452495 NPM2Q86SE8 214 aaKnown RBP18.79■□□□□ 0.6
TRAPPC12-211ENST00000452495 NBPF15Q8N660 670 aa18.79■□□□□ 0.6
TRAPPC12-211ENST00000452495 DBF4Q9UBU7 674 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC12-211ENST00000452495 COL23A1Q86Y22 540 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC12-211ENST00000452495 SLC16A10Q8TF71 515 aa18.78■□□□□ 0.6
TRAPPC12-211ENST00000452495 DDX21Q9NR30 783 aaKnown RBP eCLIP18.78■□□□□ 0.6
TRAPPC12-211ENST00000452495 USP42Q9H9J4 1324 aaKnown RBP18.77■□□□□ 0.6
TRAPPC12-211ENST00000452495 CT47B1P0C2W7 299 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC12-211ENST00000452495 RFC4P35249 363 aa18.77■□□□□ 0.6
TRAPPC12-211ENST00000452495 ARHGEF1Q92888 912 aaKnown RBP18.77■□□□□ 0.6
TRAPPC12-211ENST00000452495 CHPF2Q9P2E5 772 aa18.77■□□□□ 0.6
TRAPPC12-211ENST00000452495 VAMP4O75379 141 aa18.76■□□□□ 0.59
TRAPPC12-211ENST00000452495 PIP4K2AP48426 406 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC12-211ENST00000452495 PDIA6Q15084 440 aa18.76■□□□□ 0.59
TRAPPC12-211ENST00000452495 NECTIN2Q92692 538 aa18.76■□□□□ 0.59
TRAPPC12-211ENST00000452495 ZNF428Q96B54 188 aa18.76■□□□□ 0.59
TRAPPC12-211ENST00000452495 STK31Q9BXU1 1019 aa18.76■□□□□ 0.59
TRAPPC12-211ENST00000452495 ZNF330Q9Y3S2 320 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC12-211ENST00000452495 RGL2O15211 777 aa18.75■□□□□ 0.59
TRAPPC12-211ENST00000452495 MYL6BP14649 208 aa18.75■□□□□ 0.59
TRAPPC12-211ENST00000452495 LRP10Q7Z4F1 713 aa18.75■□□□□ 0.59
TRAPPC12-211ENST00000452495 HYPKQ9NX55 129 aa18.75■□□□□ 0.59
TRAPPC12-211ENST00000452495 NARFQ9UHQ1 456 aa18.75■□□□□ 0.59
TRAPPC12-211ENST00000452495 SMIM5Q71RC9 77 aa18.74■□□□□ 0.59
TRAPPC12-211ENST00000452495 N4BP2Q86UW6 1770 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC12-211ENST00000452495 ZPR1O75312 459 aa18.73■□□□□ 0.59
TRAPPC12-211ENST00000452495 PROSER3Q2NL68 480 aa18.73■□□□□ 0.59
TRAPPC12-211ENST00000452495 DZIP3Q86Y13 1208 aaKnown RBP18.73■□□□□ 0.59
TRAPPC12-211ENST00000452495 YTHDC1Q96MU7 727 aaKnown RBP18.73■□□□□ 0.59
TRAPPC12-211ENST00000452495 PDGFDQ9GZP0 370 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC12-211ENST00000452495 MTFR1LQ9H019 292 aa18.73■□□□□ 0.59
TRAPPC12-211ENST00000452495 AFDNP55196 1824 aaKnown RBP18.72■□□□□ 0.59
TRAPPC12-211ENST00000452495 NRXN2Q9P2S2 1712 aa18.72■□□□□ 0.59
TRAPPC12-211ENST00000452495 KIF6Q6ZMV9 814 aa18.72■□□□□ 0.59
TRAPPC12-211ENST00000452495 ANXA1P04083 346 aa18.71■□□□□ 0.59
TRAPPC12-211ENST00000452495 MAP3K15Q6ZN16 1313 aa18.71■□□□□ 0.59
TRAPPC12-211ENST00000452495 CAMTA2O94983 1202 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms