RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 CTR9Q6PD62 1173 aa22.1■■□□□ 1.13
PTPA-223ENST00000452489 NUP62CLQ9H1M0 184 aa22.1■■□□□ 1.13
PTPA-223ENST00000452489 SKILP12757 684 aa22.1■■□□□ 1.13
PTPA-223ENST00000452489 LIG1P18858 919 aa22.1■■□□□ 1.13
PTPA-223ENST00000452489 MYCBPQ99417 103 aaPredicted RBP22.1■■□□□ 1.13
PTPA-223ENST00000452489 TPM4P67936 248 aa22.09■■□□□ 1.13
PTPA-223ENST00000452489 ARHGAP29Q52LW3 1261 aa22.09■■□□□ 1.13
PTPA-223ENST00000452489 CEP85Q6P2H3 762 aa22.09■■□□□ 1.13
PTPA-223ENST00000452489 SRLQ86TD4 932 aa22.09■■□□□ 1.13
PTPA-223ENST00000452489 SYTL4Q96C24 671 aaPredicted RBP22.09■■□□□ 1.13
PTPA-223ENST00000452489 NCAPGQ9BPX3 1015 aa22.09■■□□□ 1.13
PTPA-223ENST00000452489 ZRANB2O95218 330 aaKnown RBP eCLIP22.09■■□□□ 1.13
PTPA-223ENST00000452489 EP400NLQ6ZTU2 488 aa22.09■■□□□ 1.13
PTPA-223ENST00000452489 PDE1AP54750 535 aa22.08■■□□□ 1.13
PTPA-223ENST00000452489 ATP10BO94823 1461 aa22.08■■□□□ 1.12
PTPA-223ENST00000452489 GUCY2CP25092 1073 aa22.08■■□□□ 1.12
PTPA-223ENST00000452489 RRP15Q9Y3B9 282 aaKnown RBP22.08■■□□□ 1.12
PTPA-223ENST00000452489 KRT24Q2M2I5 525 aa22.07■■□□□ 1.12
PTPA-223ENST00000452489 TDRD7Q8NHU6 1098 aaKnown RBP22.07■■□□□ 1.12
PTPA-223ENST00000452489 ATP6V1DQ9Y5K8 247 aa22.07■■□□□ 1.12
PTPA-223ENST00000452489 ARHGEF40Q8TER5 1519 aa22.07■■□□□ 1.12
PTPA-223ENST00000452489 KIAA1210Q9ULL0 1709 aa22.07■■□□□ 1.12
PTPA-223ENST00000452489 ABCA6Q8N139 1617 aa22.07■■□□□ 1.12
PTPA-223ENST00000452489 SEC31AO94979 1220 aaKnown RBP22.07■■□□□ 1.12
PTPA-223ENST00000452489 CCAR2Q8N163 923 aaKnown RBP22.07■■□□□ 1.12
PTPA-223ENST00000452489 SLC26A8Q96RN1 970 aa22.07■■□□□ 1.12
PTPA-223ENST00000452489 ABCA8O94911 1581 aa22.06■■□□□ 1.12
PTPA-223ENST00000452489 GPATCH11Q8N954 259 aa22.06■■□□□ 1.12
PTPA-223ENST00000452489 API5Q9BZZ5 524 aaKnown RBP22.06■■□□□ 1.12
PTPA-223ENST00000452489 TRPM2O94759 1503 aa22.06■■□□□ 1.12
PTPA-223ENST00000452489 SBNO2Q9Y2G9 1366 aa22.06■■□□□ 1.12
PTPA-223ENST00000452489 TSGA10IPQ3SY00 556 aa22.06■■□□□ 1.12
PTPA-223ENST00000452489 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.06■■□□□ 1.12
PTPA-223ENST00000452489 DRC1Q96MC2 740 aa22.06■■□□□ 1.12
PTPA-223ENST00000452489 TRAK1Q9UPV9 953 aa22.06■■□□□ 1.12
PTPA-223ENST00000452489 CDC42BPBQ9Y5S2 1711 aa22.05■■□□□ 1.12
PTPA-223ENST00000452489 CLGNO14967 610 aa22.05■■□□□ 1.12
PTPA-223ENST00000452489 DNAJC25Q9H1X3 360 aa22.05■■□□□ 1.12
PTPA-223ENST00000452489 KCNG1Q9UIX4 513 aa22.05■■□□□ 1.12
PTPA-223ENST00000452489 USP32Q8NFA0 1604 aa22.05■■□□□ 1.12
PTPA-223ENST00000452489 OAS2P29728 719 aaKnown RBP22.05■■□□□ 1.12
PTPA-223ENST00000452489 TMCO3Q6UWJ1 677 aa22.05■■□□□ 1.12
PTPA-223ENST00000452489 TNMDQ9H2S6 317 aa22.05■■□□□ 1.12
PTPA-223ENST00000452489 JRKLQ9Y4A0 524 aa22.05■■□□□ 1.12
PTPA-223ENST00000452489 AATKQ6ZMQ8 1374 aa22.04■■□□□ 1.12
PTPA-223ENST00000452489 COL3A1P02461 1466 aaPredicted RBP22.04■■□□□ 1.12
PTPA-223ENST00000452489 CCZ1BP86790 482 aa22.04■■□□□ 1.12
PTPA-223ENST00000452489 CCZ1P86791 482 aaPredicted RBP22.04■■□□□ 1.12
PTPA-223ENST00000452489 L2HGDHQ9H9P8 463 aa22.04■■□□□ 1.12
PTPA-223ENST00000452489 SMC3Q9UQE7 1217 aa22.04■■□□□ 1.12
PTPA-223ENST00000452489 ZNF165P49910 485 aa22.04■■□□□ 1.12
PTPA-223ENST00000452489 CT47A1Q5JQC4 288 aaPredicted RBP22.04■■□□□ 1.12
PTPA-223ENST00000452489 PACS2Q86VP3 889 aa22.04■■□□□ 1.12
PTPA-223ENST00000452489 CCDC69A6NI79 296 aa22.03■■□□□ 1.12
PTPA-223ENST00000452489 SART3Q15020 963 aaKnown RBP22.03■■□□□ 1.12
PTPA-223ENST00000452489 TTC6Q86TZ1 520 aa22.03■■□□□ 1.12
PTPA-223ENST00000452489 IL25Q9H293 177 aa22.03■■□□□ 1.12
PTPA-223ENST00000452489 CWC15Q9P013 229 aaKnown RBP22.03■■□□□ 1.12
PTPA-223ENST00000452489 MTMR6Q9Y217 621 aa22.03■■□□□ 1.12
PTPA-223ENST00000452489 CHMLP26374 656 aa22.03■■□□□ 1.12
PTPA-223ENST00000452489 GPS2Q13227 327 aa22.03■■□□□ 1.12
PTPA-223ENST00000452489 TWISTNBQ3B726 338 aaPredicted RBP22.03■■□□□ 1.12
PTPA-223ENST00000452489 RPAP2Q8IXW5 612 aaPredicted RBP22.03■■□□□ 1.12
PTPA-223ENST00000452489 BRMS1Q9HCU9 246 aa22.03■■□□□ 1.12
PTPA-223ENST00000452489 DACT1Q9NYF0 836 aa22.03■■□□□ 1.12
PTPA-223ENST00000452489 USP16Q9Y5T5 823 aa22.03■■□□□ 1.12
PTPA-223ENST00000452489 FILIP1Q7Z7B0 1213 aa22.02■■□□□ 1.12
PTPA-223ENST00000452489 REXO1L1PQ8IX06 675 aa22.02■■□□□ 1.12
PTPA-223ENST00000452489 FBXO18Q8NFZ0 1043 aa22.02■■□□□ 1.12
PTPA-223ENST00000452489 RILPL2Q969X0 211 aa22.02■■□□□ 1.12
PTPA-223ENST00000452489 UBXN6Q9BZV1 441 aa22.02■■□□□ 1.12
PTPA-223ENST00000452489 SASH3O75995 380 aa22.02■■□□□ 1.11
PTPA-223ENST00000452489 LMOD3Q0VAK6 560 aa22.02■■□□□ 1.11
PTPA-223ENST00000452489 OSBPL3Q9H4L5 887 aa22.02■■□□□ 1.11
PTPA-223ENST00000452489 CDC25BP30305 580 aa22.01■■□□□ 1.11
PTPA-223ENST00000452489 GORABQ5T7V8 394 aa22.01■■□□□ 1.11
PTPA-223ENST00000452489 C8orf58Q8NAV2 365 aa22.01■■□□□ 1.11
PTPA-223ENST00000452489 GGNBP2Q9H3C7 697 aa22.01■■□□□ 1.11
PTPA-223ENST00000452489 MBIPQ9NS73 344 aa22.01■■□□□ 1.11
PTPA-223ENST00000452489 FAM135BQ49AJ0 1406 aa22.01■■□□□ 1.11
PTPA-223ENST00000452489 AK2P54819 239 aa22.01■■□□□ 1.11
PTPA-223ENST00000452489 CCDC93Q567U6 631 aa22.01■■□□□ 1.11
PTPA-223ENST00000452489 GOLGA5Q8TBA6 731 aa22.01■■□□□ 1.11
PTPA-223ENST00000452489 VPS37CA5D8V6 355 aaPredicted RBP22■■□□□ 1.11
PTPA-223ENST00000452489 LARGE1O95461 756 aa22■■□□□ 1.11
PTPA-223ENST00000452489 CASTP20810 708 aaKnown RBP22■■□□□ 1.11
PTPA-223ENST00000452489 RUFY3Q7L099 469 aa22■■□□□ 1.11
PTPA-223ENST00000452489 CCDC34Q96HJ3 373 aa22■■□□□ 1.11
PTPA-223ENST00000452489 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22■■□□□ 1.11
PTPA-223ENST00000452489 MYO3AQ8NEV4 1616 aa22■■□□□ 1.11
PTPA-223ENST00000452489 INO80Q9ULG1 1556 aaPredicted RBP22■■□□□ 1.11
PTPA-223ENST00000452489 SNW1Q13573 536 aaKnown RBP22■■□□□ 1.11
PTPA-223ENST00000452489 FAM173BQ6P4H8 233 aa22■■□□□ 1.11
PTPA-223ENST00000452489 ORC3Q9UBD5 711 aaPredicted RBP22■■□□□ 1.11
PTPA-223ENST00000452489 PLEKHG2Q9H7P9 1386 aa21.99■■□□□ 1.11
PTPA-223ENST00000452489 A0A1B0GUL7 405 aa21.99■■□□□ 1.11
PTPA-223ENST00000452489 NEMFO60524 1076 aa21.99■■□□□ 1.11
PTPA-223ENST00000452489 GJB2P29033 226 aa21.99■■□□□ 1.11
PTPA-223ENST00000452489 GOLGA6L1Q8N7Z2 621 aa21.99■■□□□ 1.11
PTPA-223ENST00000452489 LMAN1P49257 510 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms