RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 NLGN1Q8N2Q7 840 aa13.87□□□□□ -0.19
LINC01004-202ENST00000450686 KNSTRNQ9Y448 316 aa13.87□□□□□ -0.19
LINC01004-202ENST00000450686 KIF7Q2M1P5 1343 aa13.87□□□□□ -0.19
LINC01004-202ENST00000450686 KIF3CO14782 793 aa13.86□□□□□ -0.19
LINC01004-202ENST00000450686 FCHSD2O94868 740 aa13.86□□□□□ -0.19
LINC01004-202ENST00000450686 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
LINC01004-202ENST00000450686 DNAJC10Q8IXB1 793 aa13.86□□□□□ -0.19
LINC01004-202ENST00000450686 CCDC87Q9NVE4 849 aa13.86□□□□□ -0.19
LINC01004-202ENST00000450686 PARP3Q9Y6F1 533 aa13.86□□□□□ -0.19
LINC01004-202ENST00000450686 PLEKHG2Q9H7P9 1386 aa13.85□□□□□ -0.19
LINC01004-202ENST00000450686 KCNA3P22001 575 aa13.85□□□□□ -0.19
LINC01004-202ENST00000450686 CHRNA5P30532 468 aa13.85□□□□□ -0.19
LINC01004-202ENST00000450686 INTS5Q6P9B9 1019 aaKnown RBP13.85□□□□□ -0.19
LINC01004-202ENST00000450686 USP42Q9H9J4 1324 aaKnown RBP13.85□□□□□ -0.19
LINC01004-202ENST00000450686 HSPA6P17066 643 aa13.84□□□□□ -0.19
LINC01004-202ENST00000450686 CC2D1BQ5T0F9 858 aaKnown RBP13.84□□□□□ -0.19
LINC01004-202ENST00000450686 AFDNP55196 1824 aaKnown RBP13.83□□□□□ -0.2
LINC01004-202ENST00000450686 ARFGEF1Q9Y6D6 1849 aa13.83□□□□□ -0.2
LINC01004-202ENST00000450686 TGFB2P61812 414 aa13.83□□□□□ -0.2
LINC01004-202ENST00000450686 NMRK2Q9NPI5 230 aa13.83□□□□□ -0.2
LINC01004-202ENST00000450686 KCPQ6ZWJ8 1503 aa13.83□□□□□ -0.2
LINC01004-202ENST00000450686 PITPNM1O00562 1244 aa13.82□□□□□ -0.2
LINC01004-202ENST00000450686 USPL1Q5W0Q7 1092 aa13.82□□□□□ -0.2
LINC01004-202ENST00000450686 SLC52A2Q9HAB3 445 aa13.82□□□□□ -0.2
LINC01004-202ENST00000450686 MRC1P22897 1456 aa13.81□□□□□ -0.2
LINC01004-202ENST00000450686 RNMTO43148 476 aaKnown RBP13.81□□□□□ -0.2
LINC01004-202ENST00000450686 MTHFSDQ2M296 383 aaKnown RBP13.81□□□□□ -0.2
LINC01004-202ENST00000450686 AKAP4Q5JQC9 854 aa13.81□□□□□ -0.2
LINC01004-202ENST00000450686 C9orf131Q5VYM1 1079 aa13.81□□□□□ -0.2
LINC01004-202ENST00000450686 POLRMTO00411 1230 aaKnown RBP13.8□□□□□ -0.2
LINC01004-202ENST00000450686 ZBTB1Q9Y2K1 713 aa13.8□□□□□ -0.2
LINC01004-202ENST00000450686 SOS1Q07889 1333 aaPredicted RBP13.8□□□□□ -0.2
LINC01004-202ENST00000450686 UBR2Q8IWV8 1755 aa13.79□□□□□ -0.2
LINC01004-202ENST00000450686 CYP19A1P11511 503 aaPredicted RBP13.79□□□□□ -0.2
LINC01004-202ENST00000450686 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
LINC01004-202ENST00000450686 COL3A1P02461 1466 aaPredicted RBP13.79□□□□□ -0.2
LINC01004-202ENST00000450686 SBF1O95248 1867 aa13.78□□□□□ -0.2
LINC01004-202ENST00000450686 HTRA3P83110 453 aa13.78□□□□□ -0.2
LINC01004-202ENST00000450686 RASSF7Q02833 373 aa13.78□□□□□ -0.2
LINC01004-202ENST00000450686 DALRD3Q5D0E6 543 aaKnown RBP13.78□□□□□ -0.2
LINC01004-202ENST00000450686 PIM2Q9P1W9 311 aa13.78□□□□□ -0.2
LINC01004-202ENST00000450686 COL15A1P39059 1388 aa13.78□□□□□ -0.2
LINC01004-202ENST00000450686 CARMIL3Q8ND23 1372 aa13.78□□□□□ -0.2
LINC01004-202ENST00000450686 PER1O15534 1290 aaPredicted RBP13.77□□□□□ -0.21
LINC01004-202ENST00000450686 DIAPH1O60610 1272 aaKnown RBP13.77□□□□□ -0.21
LINC01004-202ENST00000450686 ZPR1O75312 459 aa13.77□□□□□ -0.21
LINC01004-202ENST00000450686 CANXP27824 592 aaKnown RBP13.77□□□□□ -0.21
LINC01004-202ENST00000450686 TM4SF1P30408 202 aa13.77□□□□□ -0.21
LINC01004-202ENST00000450686 NFIXQ14938 502 aa13.77□□□□□ -0.21
LINC01004-202ENST00000450686 BCL2L12Q9HB09 334 aa13.77□□□□□ -0.21
LINC01004-202ENST00000450686 BICDL1Q6ZP65 573 aa13.76□□□□□ -0.21
LINC01004-202ENST00000450686 CCDC24Q8N4L8 307 aa13.76□□□□□ -0.21
LINC01004-202ENST00000450686 RNF181Q9P0P0 153 aa13.76□□□□□ -0.21
LINC01004-202ENST00000450686 PCNTO95613 3336 aa13.75□□□□□ -0.21
LINC01004-202ENST00000450686 U2SURPO15042 1029 aaKnown RBP13.75□□□□□ -0.21
LINC01004-202ENST00000450686 PRELPP51888 382 aa13.75□□□□□ -0.21
LINC01004-202ENST00000450686 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
LINC01004-202ENST00000450686 SIPA1L3O60292 1781 aaPredicted RBP13.75□□□□□ -0.21
LINC01004-202ENST00000450686 NRXN2Q9P2S2 1712 aa13.75□□□□□ -0.21
LINC01004-202ENST00000450686 CCDC88AQ3V6T2 1871 aa13.74□□□□□ -0.21
LINC01004-202ENST00000450686 ANKRD31Q8N7Z5 1873 aa13.74□□□□□ -0.21
LINC01004-202ENST00000450686 DLEC1Q9Y238 1755 aa13.74□□□□□ -0.21
LINC01004-202ENST00000450686 IFFO2Q5TF58 517 aa13.74□□□□□ -0.21
LINC01004-202ENST00000450686 NARFQ9UHQ1 456 aa13.74□□□□□ -0.21
LINC01004-202ENST00000450686 ZNF330Q9Y3S2 320 aaPredicted RBP13.74□□□□□ -0.21
LINC01004-202ENST00000450686 COL11A2P13942 1736 aaPredicted RBP13.73□□□□□ -0.21
LINC01004-202ENST00000450686 WDR90Q96KV7 1748 aa13.73□□□□□ -0.21
LINC01004-202ENST00000450686 TOMM70O94826 608 aa13.73□□□□□ -0.21
LINC01004-202ENST00000450686 SERPINB2P05120 415 aa13.73□□□□□ -0.21
LINC01004-202ENST00000450686 IL17REQ8NFR9 667 aa13.73□□□□□ -0.21
LINC01004-202ENST00000450686 ZNF496Q96IT1 587 aaPredicted RBP13.73□□□□□ -0.21
LINC01004-202ENST00000450686 CACNA1SQ13698 1873 aa13.72□□□□□ -0.21
LINC01004-202ENST00000450686 KCNQ3O43525 872 aa13.72□□□□□ -0.21
LINC01004-202ENST00000450686 PIP4K2AP48426 406 aaPredicted RBP13.72□□□□□ -0.21
LINC01004-202ENST00000450686 RRAGCQ9HB90 399 aa13.72□□□□□ -0.21
LINC01004-202ENST00000450686 TIAM2Q8IVF5 1701 aa13.72□□□□□ -0.21
LINC01004-202ENST00000450686 SCN7AQ01118 1682 aa13.72□□□□□ -0.21
LINC01004-202ENST00000450686 TBC1D9BQ66K14 1250 aa13.71□□□□□ -0.21
LINC01004-202ENST00000450686 C2CD5Q86YS7 1000 aa13.71□□□□□ -0.21
LINC01004-202ENST00000450686 PHACTR3Q96KR7 559 aa13.71□□□□□ -0.21
LINC01004-202ENST00000450686 TBC1D2BQ9UPU7 963 aa13.71□□□□□ -0.21
LINC01004-202ENST00000450686 TNRC6CQ9HCJ0 1690 aaKnown RBP13.7□□□□□ -0.22
LINC01004-202ENST00000450686 APLP1P51693 650 aa13.7□□□□□ -0.22
LINC01004-202ENST00000450686 TTC5Q8N0Z6 440 aa13.7□□□□□ -0.22
LINC01004-202ENST00000450686 DNAJC5GQ8N7S2 189 aa13.7□□□□□ -0.22
LINC01004-202ENST00000450686 PRAMEF22A3QJZ6 481 aa13.69□□□□□ -0.22
LINC01004-202ENST00000450686 A1BGP04217 495 aa13.69□□□□□ -0.22
LINC01004-202ENST00000450686 EIF5P55010 431 aaKnown RBP13.69□□□□□ -0.22
LINC01004-202ENST00000450686 TEFQ10587 303 aa13.69□□□□□ -0.22
LINC01004-202ENST00000450686 C16orf71Q8IYS4 520 aaPredicted RBP13.69□□□□□ -0.22
LINC01004-202ENST00000450686 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
LINC01004-202ENST00000450686 HEG1Q9ULI3 1381 aa13.69□□□□□ -0.22
LINC01004-202ENST00000450686 GNAT3A8MTJ3 354 aa13.68□□□□□ -0.22
LINC01004-202ENST00000450686 ZNF790Q6PG37 636 aa13.68□□□□□ -0.22
LINC01004-202ENST00000450686 RBM46Q8TBY0 533 aaKnown RBP13.68□□□□□ -0.22
LINC01004-202ENST00000450686 NFKBIEO00221 500 aa13.67□□□□□ -0.22
LINC01004-202ENST00000450686 STARD3NLO95772 234 aa13.67□□□□□ -0.22
LINC01004-202ENST00000450686 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
LINC01004-202ENST00000450686 VSIG10Q8N0Z9 540 aa13.67□□□□□ -0.22
LINC01004-202ENST00000450686 KDM2BQ8NHM5 1336 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms