RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 EXOC4Q96A65 974 aa2.56□□□□□ -2
USP53-202ENST00000450251 ZNF428Q96B54 188 aa2.56□□□□□ -2
USP53-202ENST00000450251 API5Q9BZZ5 524 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 STMN4Q9H169 189 aaPredicted RBP2.56□□□□□ -2
USP53-202ENST00000450251 ANO10Q9NW15 660 aa2.56□□□□□ -2
USP53-202ENST00000450251 PRDM4Q9UKN5 801 aa2.56□□□□□ -2
USP53-202ENST00000450251 RRP15Q9Y3B9 282 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 PTPN23Q9H3S7 1636 aa2.56□□□□□ -2
USP53-202ENST00000450251 RUSC2Q8N2Y8 1516 aa2.56□□□□□ -2
USP53-202ENST00000450251 MYOM3Q5VTT5 1437 aa2.56□□□□□ -2
USP53-202ENST00000450251 PBRM1Q86U86 1689 aa2.56□□□□□ -2
USP53-202ENST00000450251 HIP1O00291 1037 aa2.56□□□□□ -2
USP53-202ENST00000450251 POTEIP0CG38 1075 aa2.56□□□□□ -2
USP53-202ENST00000450251 ZKSCAN1P17029 563 aaPredicted RBP2.56□□□□□ -2
USP53-202ENST00000450251 GBP1P32455 592 aa2.56□□□□□ -2
USP53-202ENST00000450251 GCKP35557 465 aa2.56□□□□□ -2
USP53-202ENST00000450251 UBE2HP62256 183 aa2.56□□□□□ -2
USP53-202ENST00000450251 SETDB1Q15047 1291 aa2.56□□□□□ -2
USP53-202ENST00000450251 BRD3Q15059 726 aa2.56□□□□□ -2
USP53-202ENST00000450251 C8orf34Q49A92 452 aa2.56□□□□□ -2
USP53-202ENST00000450251 ZNF365Q70YC5 407 aa2.56□□□□□ -2
USP53-202ENST00000450251 LZICQ8WZA0 190 aa2.56□□□□□ -2
USP53-202ENST00000450251 NAP1L3Q99457 506 aaPredicted RBP2.56□□□□□ -2
USP53-202ENST00000450251 MPHOSPH9Q99550 1183 aa2.56□□□□□ -2
USP53-202ENST00000450251 UBA5Q9GZZ9 404 aa2.56□□□□□ -2
USP53-202ENST00000450251 BCL2L12Q9HB09 334 aa2.56□□□□□ -2
USP53-202ENST00000450251 MED4Q9NPJ6 270 aa2.56□□□□□ -2
USP53-202ENST00000450251 PDZRN3Q9UPQ7 1066 aa2.56□□□□□ -2
USP53-202ENST00000450251 GCOM1H8Y6P7 765 aaPredicted RBP2.56□□□□□ -2
USP53-202ENST00000450251 ZFYP08048 801 aaPredicted RBP2.56□□□□□ -2
USP53-202ENST00000450251 MYZAPP0CAP1 466 aa2.56□□□□□ -2
USP53-202ENST00000450251 TSPY4P0CV99 314 aa2.56□□□□□ -2
USP53-202ENST00000450251 TSPY10P0CW01 314 aa2.56□□□□□ -2
USP53-202ENST00000450251 SKILP12757 684 aa2.56□□□□□ -2
USP53-202ENST00000450251 TXLNAP40222 546 aa2.56□□□□□ -2
USP53-202ENST00000450251 SMC1AQ14683 1233 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 NAA25Q14CX7 972 aa2.56□□□□□ -2
USP53-202ENST00000450251 STX1AQ16623 288 aa2.56□□□□□ -2
USP53-202ENST00000450251 WHAMMP3Q1A5X7 153 aa2.56□□□□□ -2
USP53-202ENST00000450251 LRRC23Q53EV4 343 aaPredicted RBP2.56□□□□□ -2
USP53-202ENST00000450251 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.56□□□□□ -2
USP53-202ENST00000450251 RTF1Q92541 710 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 GFM2Q969S9 779 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 BATF3Q9NR55 127 aa2.56□□□□□ -2
USP53-202ENST00000450251 LUC7L2Q9Y383 392 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 HSF2BPO75031 334 aa2.56□□□□□ -2
USP53-202ENST00000450251 CDC25BP30305 580 aa2.56□□□□□ -2
USP53-202ENST00000450251 TSNAXIP1Q2TAA8 658 aa2.56□□□□□ -2
USP53-202ENST00000450251 MEX3CQ5U5Q3 659 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 DDX46Q7L014 1031 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 DAAM2Q86T65 1068 aa2.56□□□□□ -2
USP53-202ENST00000450251 RGS22Q8NE09 1264 aa2.56□□□□□ -2
USP53-202ENST00000450251 TBC1D22AQ8WUA7 517 aa2.56□□□□□ -2
USP53-202ENST00000450251 TCP11Q8WWU5 503 aa2.56□□□□□ -2
USP53-202ENST00000450251 CDK5RAP3Q96JB5 506 aa2.56□□□□□ -2
USP53-202ENST00000450251 IFT74Q96LB3 600 aa2.56□□□□□ -2
USP53-202ENST00000450251 PANK2Q9BZ23 570 aa2.56□□□□□ -2
USP53-202ENST00000450251 LARSQ9P2J5 1176 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 IMPACTQ9P2X3 320 aa2.56□□□□□ -2
USP53-202ENST00000450251 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.56□□□□□ -2
USP53-202ENST00000450251 CFAP45Q9UL16 551 aa2.56□□□□□ -2
USP53-202ENST00000450251 FAM184BQ9ULE4 1060 aa2.56□□□□□ -2
USP53-202ENST00000450251 SATB2Q9UPW6 733 aa2.56□□□□□ -2
USP53-202ENST00000450251 LMTK3Q96Q04 1460 aa2.56□□□□□ -2
USP53-202ENST00000450251 VIRMAQ69YN4 1812 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 FGD5Q6ZNL6 1462 aa2.55□□□□□ -2
USP53-202ENST00000450251 ZRANB2O95218 330 aaKnown RBP eCLIP2.55□□□□□ -2
USP53-202ENST00000450251 ZFXP17010 805 aaPredicted RBP2.55□□□□□ -2
USP53-202ENST00000450251 DESP17661 470 aa2.55□□□□□ -2
USP53-202ENST00000450251 ATP2B1P20020 1258 aa2.55□□□□□ -2
USP53-202ENST00000450251 FKBP5Q13451 457 aaPredicted RBP2.55□□□□□ -2
USP53-202ENST00000450251 HSP90AB2PQ58FF8 381 aa2.55□□□□□ -2
USP53-202ENST00000450251 CCDC158Q5M9N0 1113 aa2.55□□□□□ -2
USP53-202ENST00000450251 GORABQ5T7V8 394 aa2.55□□□□□ -2
USP53-202ENST00000450251 RNF187Q5TA31 235 aaPredicted RBP2.55□□□□□ -2
USP53-202ENST00000450251 FAM76AQ8TAV0 307 aa2.55□□□□□ -2
USP53-202ENST00000450251 DCAF11Q8TEB1 546 aa2.55□□□□□ -2
USP53-202ENST00000450251 DDX12PQ92771 950 aa2.55□□□□□ -2
USP53-202ENST00000450251 NAA15Q9BXJ9 866 aaKnown RBP2.55□□□□□ -2
USP53-202ENST00000450251 SCAND2PQ9GZW5 306 aaPredicted RBP2.55□□□□□ -2
USP53-202ENST00000450251 VCX3BQ9H321 246 aa2.55□□□□□ -2
USP53-202ENST00000450251 ACTR5Q9H9F9 607 aaPredicted RBP2.55□□□□□ -2
USP53-202ENST00000450251 VCX3AQ9NNX9 186 aa2.55□□□□□ -2
USP53-202ENST00000450251 SUFUQ9UMX1 484 aa2.55□□□□□ -2
USP53-202ENST00000450251 ERC2O15083 957 aa2.55□□□□□ -2
USP53-202ENST00000450251 NPHP1O15259 732 aa2.55□□□□□ -2
USP53-202ENST00000450251 PPP1R12BO60237 982 aaPredicted RBP2.55□□□□□ -2
USP53-202ENST00000450251 POTEJP0CG39 1038 aa2.55□□□□□ -2
USP53-202ENST00000450251 GUCY2CP25092 1073 aa2.55□□□□□ -2
USP53-202ENST00000450251 SESN3P58005 492 aa2.55□□□□□ -2
USP53-202ENST00000450251 LACTBP83111 547 aaPredicted RBP2.55□□□□□ -2
USP53-202ENST00000450251 MAP7Q14244 749 aa2.55□□□□□ -2
USP53-202ENST00000450251 TERF2Q15554 542 aa2.55□□□□□ -2
USP53-202ENST00000450251 KIF4BQ2VIQ3 1234 aa2.55□□□□□ -2
USP53-202ENST00000450251 HSP90AB4PQ58FF6 505 aa2.55□□□□□ -2
USP53-202ENST00000450251 CROCCP2Q86T23 111 aa2.55□□□□□ -2
USP53-202ENST00000450251 PPFIBP1Q86W92 1011 aa2.55□□□□□ -2
USP53-202ENST00000450251 FAM71BQ8TC56 605 aa2.55□□□□□ -2
USP53-202ENST00000450251 CABS1Q96KC9 395 aa2.55□□□□□ -2
USP53-202ENST00000450251 SRCIN1Q9C0H9 1055 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms