RNA–Protein interactions for RNA: ENST00000449757.5

DDX39B-211, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-211ENST00000449757 RBM46Q8TBY0 533 aaKnown RBP14.01□□□□□ -0.17
DDX39B-211ENST00000449757 SLC52A2Q9HAB3 445 aa14.01□□□□□ -0.17
DDX39B-211ENST00000449757 CACNA1SQ13698 1873 aa14.01□□□□□ -0.17
DDX39B-211ENST00000449757 UBR2Q8IWV8 1755 aa14.01□□□□□ -0.17
DDX39B-211ENST00000449757 NRXN2Q9P2S2 1712 aa14.01□□□□□ -0.17
DDX39B-211ENST00000449757 SOS1Q07889 1333 aaPredicted RBP14□□□□□ -0.17
DDX39B-211ENST00000449757 HMOX1P09601 288 aa14□□□□□ -0.17
DDX39B-211ENST00000449757 RASSF7Q02833 373 aa14□□□□□ -0.17
DDX39B-211ENST00000449757 HTRA3P83110 453 aa13.99□□□□□ -0.17
DDX39B-211ENST00000449757 RRAGCQ9HB90 399 aa13.99□□□□□ -0.17
DDX39B-211ENST00000449757 LGR6Q9HBX8 967 aa13.99□□□□□ -0.17
DDX39B-211ENST00000449757 RNMTO43148 476 aaKnown RBP13.98□□□□□ -0.17
DDX39B-211ENST00000449757 ZBTB1Q9Y2K1 713 aa13.98□□□□□ -0.17
DDX39B-211ENST00000449757 SCN7AQ01118 1682 aa13.98□□□□□ -0.17
DDX39B-211ENST00000449757 NFIXQ14938 502 aa13.97□□□□□ -0.17
DDX39B-211ENST00000449757 ANKRD31Q8N7Z5 1873 aa13.96□□□□□ -0.17
DDX39B-211ENST00000449757 CYP19A1P11511 503 aaPredicted RBP13.96□□□□□ -0.17
DDX39B-211ENST00000449757 CANXP27824 592 aaKnown RBP13.96□□□□□ -0.17
DDX39B-211ENST00000449757 TM4SF1P30408 202 aa13.96□□□□□ -0.17
DDX39B-211ENST00000449757 FSTL1Q12841 308 aa13.96□□□□□ -0.17
DDX39B-211ENST00000449757 CNGB1Q14028 1251 aaPredicted RBP13.96□□□□□ -0.17
DDX39B-211ENST00000449757 BICDL1Q6ZP65 573 aa13.96□□□□□ -0.17
DDX39B-211ENST00000449757 TTC5Q8N0Z6 440 aa13.96□□□□□ -0.17
DDX39B-211ENST00000449757 DNAJC5GQ8N7S2 189 aa13.96□□□□□ -0.17
DDX39B-211ENST00000449757 NARFQ9UHQ1 456 aa13.96□□□□□ -0.17
DDX39B-211ENST00000449757 ZNF330Q9Y3S2 320 aaPredicted RBP13.96□□□□□ -0.17
DDX39B-211ENST00000449757 COL11A2P13942 1736 aaPredicted RBP13.95□□□□□ -0.18
DDX39B-211ENST00000449757 SERPINB2P05120 415 aa13.95□□□□□ -0.18
DDX39B-211ENST00000449757 C2CD5Q86YS7 1000 aa13.95□□□□□ -0.18
DDX39B-211ENST00000449757 CCER1Q8TC90 406 aaPredicted RBP13.95□□□□□ -0.18
DDX39B-211ENST00000449757 KLRG1Q96E93 195 aa13.95□□□□□ -0.18
DDX39B-211ENST00000449757 CARMIL3Q8ND23 1372 aa13.95□□□□□ -0.18
DDX39B-211ENST00000449757 SIPA1L3O60292 1781 aaPredicted RBP13.94□□□□□ -0.18
DDX39B-211ENST00000449757 DICER1Q9UPY3 1922 aaKnown RBP13.94□□□□□ -0.18
DDX39B-211ENST00000449757 MTHFSDQ2M296 383 aaKnown RBP13.94□□□□□ -0.18
DDX39B-211ENST00000449757 AMER1Q5JTC6 1135 aaPredicted RBP13.94□□□□□ -0.18
DDX39B-211ENST00000449757 CC2D1BQ5T0F9 858 aaKnown RBP13.94□□□□□ -0.18
DDX39B-211ENST00000449757 SMC1BQ8NDV3 1235 aa13.94□□□□□ -0.18
DDX39B-211ENST00000449757 DIAPH1O60610 1272 aaKnown RBP13.93□□□□□ -0.18
DDX39B-211ENST00000449757 LMNB1P20700 586 aa13.93□□□□□ -0.18
DDX39B-211ENST00000449757 TTLL6Q8N841 843 aa13.93□□□□□ -0.18
DDX39B-211ENST00000449757 KIF7Q2M1P5 1343 aa13.92□□□□□ -0.18
DDX39B-211ENST00000449757 ZC3H4Q9UPT8 1303 aaKnown RBP13.92□□□□□ -0.18
DDX39B-211ENST00000449757 H0YIN7 160 aa13.92□□□□□ -0.18
DDX39B-211ENST00000449757 NPHP1O15259 732 aa13.92□□□□□ -0.18
DDX39B-211ENST00000449757 ZNF622Q969S3 477 aaKnown RBP eCLIP13.92□□□□□ -0.185e-15■□□□□ 8.1
DDX39B-211ENST00000449757 ZNF219Q9P2Y4 722 aaPredicted RBP13.92□□□□□ -0.18
DDX39B-211ENST00000449757 BCORQ6W2J9 1755 aa13.91□□□□□ -0.18
DDX39B-211ENST00000449757 FER1L6Q2WGJ9 1857 aa13.91□□□□□ -0.18
DDX39B-211ENST00000449757 A0A087WZG4 1122 aa13.91□□□□□ -0.18
DDX39B-211ENST00000449757 U2SURPO15042 1029 aaKnown RBP13.91□□□□□ -0.18
DDX39B-211ENST00000449757 STARD3NLO95772 234 aa13.91□□□□□ -0.18
DDX39B-211ENST00000449757 TEFQ10587 303 aa13.91□□□□□ -0.18
DDX39B-211ENST00000449757 VSIG10Q8N0Z9 540 aa13.91□□□□□ -0.18
DDX39B-211ENST00000449757 BCL2L12Q9HB09 334 aa13.91□□□□□ -0.18
DDX39B-211ENST00000449757 NPM2Q86SE8 214 aaKnown RBP13.9□□□□□ -0.18
DDX39B-211ENST00000449757 ARFGEF2Q9Y6D5 1785 aa13.89□□□□□ -0.19
DDX39B-211ENST00000449757 GLTPD2A6NH11 291 aa13.89□□□□□ -0.19
DDX39B-211ENST00000449757 CAPN15O75808 1086 aa13.89□□□□□ -0.19
DDX39B-211ENST00000449757 CCDC24Q8N4L8 307 aa13.89□□□□□ -0.19
DDX39B-211ENST00000449757 PCNTO95613 3336 aa13.89□□□□□ -0.19
DDX39B-211ENST00000449757 COL3A1P02461 1466 aaPredicted RBP13.88□□□□□ -0.19
DDX39B-211ENST00000449757 HEG1Q9ULI3 1381 aa13.88□□□□□ -0.19
DDX39B-211ENST00000449757 NFKBIEO00221 500 aa13.88□□□□□ -0.19
DDX39B-211ENST00000449757 VEGFAP15692 232 aaPredicted RBP13.88□□□□□ -0.19
DDX39B-211ENST00000449757 PRELPP51888 382 aa13.88□□□□□ -0.19
DDX39B-211ENST00000449757 TBC1D9BQ66K14 1250 aa13.88□□□□□ -0.19
DDX39B-211ENST00000449757 TBC1D2BQ9UPU7 963 aa13.88□□□□□ -0.19
DDX39B-211ENST00000449757 GNAT3A8MTJ3 354 aa13.87□□□□□ -0.19
DDX39B-211ENST00000449757 C21orf2O43822 256 aa13.87□□□□□ -0.19
DDX39B-211ENST00000449757 PDE6BP35913 854 aa13.87□□□□□ -0.19
DDX39B-211ENST00000449757 EIF5P55010 431 aaKnown RBP13.87□□□□□ -0.19
DDX39B-211ENST00000449757 JMYQ8N9B5 988 aa13.87□□□□□ -0.19
DDX39B-211ENST00000449757 GAS2L2Q8NHY3 880 aa13.87□□□□□ -0.19
DDX39B-211ENST00000449757 ZNF496Q96IT1 587 aaPredicted RBP13.87□□□□□ -0.19
DDX39B-211ENST00000449757 SLX4Q8IY92 1834 aa13.87□□□□□ -0.19
DDX39B-211ENST00000449757 COL13A1Q5TAT6 717 aaPredicted RBP13.86□□□□□ -0.19
DDX39B-211ENST00000449757 ZNF790Q6PG37 636 aa13.86□□□□□ -0.19
DDX39B-211ENST00000449757 ST5P78524 1137 aa13.85□□□□□ -0.19
DDX39B-211ENST00000449757 ERFEQ4G0M1 354 aa13.85□□□□□ -0.19
DDX39B-211ENST00000449757 PRR5LQ6MZQ0 368 aa13.85□□□□□ -0.19
DDX39B-211ENST00000449757 DPY19L2Q6NUT2 758 aa13.85□□□□□ -0.19
DDX39B-211ENST00000449757 TNS4Q8IZW8 715 aa13.85□□□□□ -0.19
DDX39B-211ENST00000449757 CNBD1Q8NA66 436 aa13.85□□□□□ -0.19
DDX39B-211ENST00000449757 FMNL2Q96PY5 1086 aa13.85□□□□□ -0.19
DDX39B-211ENST00000449757 TEX13AQ9BXU3 409 aaPredicted RBP13.85□□□□□ -0.19
DDX39B-211ENST00000449757 SETDB2Q96T68 719 aa13.84□□□□□ -0.19
DDX39B-211ENST00000449757 BRIP1Q9BX63 1249 aa13.84□□□□□ -0.19
DDX39B-211ENST00000449757 TAOK3Q9H2K8 898 aa13.84□□□□□ -0.19
DDX39B-211ENST00000449757 PDZRN3Q9UPQ7 1066 aa13.84□□□□□ -0.19
DDX39B-211ENST00000449757 A1BGP04217 495 aa13.83□□□□□ -0.2
DDX39B-211ENST00000449757 IL6STP40189 918 aaPredicted RBP13.83□□□□□ -0.2
DDX39B-211ENST00000449757 PIP4K2AP48426 406 aaPredicted RBP13.83□□□□□ -0.2
DDX39B-211ENST00000449757 IL17REQ8NFR9 667 aa13.83□□□□□ -0.2
DDX39B-211ENST00000449757 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
DDX39B-211ENST00000449757 HSPA1AP0DMV8 641 aaKnown RBP13.82□□□□□ -0.2
DDX39B-211ENST00000449757 HSPA1BP0DMV9 641 aaKnown RBP13.82□□□□□ -0.2
DDX39B-211ENST00000449757 DZIP3Q86Y13 1208 aaKnown RBP13.82□□□□□ -0.2
DDX39B-211ENST00000449757 PER1O15534 1290 aaPredicted RBP13.81□□□□□ -0.2
DDX39B-211ENST00000449757 KCNQ3O43525 872 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms