RNA–Protein interactions for RNA: ENST00000448732.1

R3HDM2-208, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 195 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-208ENST00000448732 TTC5Q8N0Z6 440 aa31.22■■■□□ 2.59
R3HDM2-208ENST00000448732 BRCA1P38398 1863 aaKnown RBP31.22■■■□□ 2.59
R3HDM2-208ENST00000448732 FCHSD2O94868 740 aa31.21■■■□□ 2.59
R3HDM2-208ENST00000448732 ZNF526Q8TF50 670 aaPredicted RBP31.21■■■□□ 2.59
R3HDM2-208ENST00000448732 COL15A1P39059 1388 aa31.2■■■□□ 2.59
R3HDM2-208ENST00000448732 PHACTR3Q96KR7 559 aa31.2■■■□□ 2.59
R3HDM2-208ENST00000448732 PIM2Q9P1W9 311 aa31.2■■■□□ 2.59
R3HDM2-208ENST00000448732 STARD3NLO95772 234 aa31.19■■■□□ 2.58
R3HDM2-208ENST00000448732 ZNF790Q6PG37 636 aa31.19■■■□□ 2.58
R3HDM2-208ENST00000448732 ARHGAP27Q6ZUM4 889 aa31.19■■■□□ 2.58
R3HDM2-208ENST00000448732 RSPH6AQ9H0K4 717 aa31.19■■■□□ 2.58
R3HDM2-208ENST00000448732 ZNF496Q96IT1 587 aaPredicted RBP31.18■■■□□ 2.58
R3HDM2-208ENST00000448732 NUDCQ9Y266 331 aa31.18■■■□□ 2.58
R3HDM2-208ENST00000448732 PPP2R1AP30153 589 aa31.17■■■□□ 2.58
R3HDM2-208ENST00000448732 PRKAR2BP31323 418 aa31.17■■■□□ 2.58
R3HDM2-208ENST00000448732 CANXP27824 592 aaKnown RBP31.16■■■□□ 2.58
R3HDM2-208ENST00000448732 NFIXQ14938 502 aa31.16■■■□□ 2.58
R3HDM2-208ENST00000448732 TEX13AQ9BXU3 409 aaPredicted RBP31.16■■■□□ 2.58
R3HDM2-208ENST00000448732 BCL2L12Q9HB09 334 aa31.16■■■□□ 2.58
R3HDM2-208ENST00000448732 CEMIPQ8WUJ3 1361 aa31.16■■■□□ 2.58
R3HDM2-208ENST00000448732 SIPA1L3O60292 1781 aaPredicted RBP31.15■■■□□ 2.58
R3HDM2-208ENST00000448732 EIF5P55010 431 aaKnown RBP31.15■■■□□ 2.58
R3HDM2-208ENST00000448732 HEG1Q9ULI3 1381 aa31.15■■■□□ 2.58
R3HDM2-208ENST00000448732 ARFGEF1Q9Y6D6 1849 aa31.14■■■□□ 2.58
R3HDM2-208ENST00000448732 DALRD3Q5D0E6 543 aaKnown RBP31.13■■■□□ 2.57
R3HDM2-208ENST00000448732 CHRNA5P30532 468 aa31.12■■■□□ 2.57
R3HDM2-208ENST00000448732 A0A087WZG4 1122 aa31.11■■■□□ 2.57
R3HDM2-208ENST00000448732 U2AF1L5P0DN76 240 aaPredicted RBP31.1■■■□□ 2.57
R3HDM2-208ENST00000448732 U2AF1Q01081 240 aaKnown RBP eCLIP31.1■■■□□ 2.577e-7■■■■□ 23.3
R3HDM2-208ENST00000448732 FMNL2Q96PY5 1086 aa31.1■■■□□ 2.57
R3HDM2-208ENST00000448732 KIF3CO14782 793 aa31.09■■■□□ 2.57
R3HDM2-208ENST00000448732 SERPINB2P05120 415 aa31.09■■■□□ 2.57
R3HDM2-208ENST00000448732 AFDNP55196 1824 aaKnown RBP31.09■■■□□ 2.57
R3HDM2-208ENST00000448732 NRXN2Q9P2S2 1712 aa31.09■■■□□ 2.57
R3HDM2-208ENST00000448732 BTBD11A6QL63 1104 aa31.08■■■□□ 2.57
R3HDM2-208ENST00000448732 KCNQ3O43525 872 aa31.06■■■□□ 2.56
R3HDM2-208ENST00000448732 IL6STP40189 918 aaPredicted RBP31.05■■■□□ 2.56
R3HDM2-208ENST00000448732 C9orf131Q5VYM1 1079 aa31.05■■■□□ 2.56
R3HDM2-208ENST00000448732 A1BGP04217 495 aa31.03■■■□□ 2.56
R3HDM2-208ENST00000448732 RTF1Q92541 710 aaKnown RBP31.03■■■□□ 2.56
R3HDM2-208ENST00000448732 TBC1D2BQ9UPU7 963 aa31.02■■■□□ 2.56
R3HDM2-208ENST00000448732 HTATSF1O43719 755 aaKnown RBP31.01■■■□□ 2.55
R3HDM2-208ENST00000448732 TBC1D9BQ66K14 1250 aa31.01■■■□□ 2.55
R3HDM2-208ENST00000448732 BICDL1Q6ZP65 573 aa31.01■■■□□ 2.55
R3HDM2-208ENST00000448732 MCM10Q7L590 875 aa31.01■■■□□ 2.55
R3HDM2-208ENST00000448732 HSPA6P17066 643 aa31■■■□□ 2.55
R3HDM2-208ENST00000448732 ZNF330Q9Y3S2 320 aaPredicted RBP30.99■■■□□ 2.55
R3HDM2-208ENST00000448732 USP16Q9Y5T5 823 aa30.99■■■□□ 2.55
R3HDM2-208ENST00000448732 NPM2Q86SE8 214 aaKnown RBP30.97■■■□□ 2.55
R3HDM2-208ENST00000448732 C2CD5Q86YS7 1000 aa30.97■■■□□ 2.55
R3HDM2-208ENST00000448732 H0YIN7 160 aa30.96■■■□□ 2.55
R3HDM2-208ENST00000448732 TTLL6Q8N841 843 aa30.96■■■□□ 2.55
R3HDM2-208ENST00000448732 SBF1O95248 1867 aa30.95■■■□□ 2.55
R3HDM2-208ENST00000448732 CARMIL3Q8ND23 1372 aa30.95■■■□□ 2.55
R3HDM2-208ENST00000448732 DLEC1Q9Y238 1755 aa30.95■■■□□ 2.55
R3HDM2-208ENST00000448732 SCN7AQ01118 1682 aa30.95■■■□□ 2.55
R3HDM2-208ENST00000448732 CAMTA2O94983 1202 aa30.95■■■□□ 2.55
R3HDM2-208ENST00000448732 SNRPA1P09661 255 aaKnown RBP30.95■■■□□ 2.55
R3HDM2-208ENST00000448732 DCTN1Q14203 1278 aa30.95■■■□□ 2.55
R3HDM2-208ENST00000448732 NMRK2Q9NPI5 230 aa30.95■■■□□ 2.55
R3HDM2-208ENST00000448732 RNF181Q9P0P0 153 aa30.95■■■□□ 2.55
R3HDM2-208ENST00000448732 TOMM70O94826 608 aa30.94■■■□□ 2.54
R3HDM2-208ENST00000448732 CEP350Q5VT06 3117 aa30.93■■■□□ 2.54
R3HDM2-208ENST00000448732 PRAMEF22A3QJZ6 481 aa30.93■■■□□ 2.54
R3HDM2-208ENST00000448732 BRIP1Q9BX63 1249 aa30.93■■■□□ 2.54
R3HDM2-208ENST00000448732 PDZRN3Q9UPQ7 1066 aa30.93■■■□□ 2.54
R3HDM2-208ENST00000448732 TAF7Q15545 349 aaPredicted RBP30.91■■■□□ 2.54
R3HDM2-208ENST00000448732 PRR5LQ6MZQ0 368 aa30.91■■■□□ 2.54
R3HDM2-208ENST00000448732 DZIP3Q86Y13 1208 aaKnown RBP30.91■■■□□ 2.54
R3HDM2-208ENST00000448732 SETDB2Q96T68 719 aa30.91■■■□□ 2.54
R3HDM2-208ENST00000448732 PDE6BP35913 854 aa30.9■■■□□ 2.54
R3HDM2-208ENST00000448732 ANKRD31Q8N7Z5 1873 aa30.89■■■□□ 2.53
R3HDM2-208ENST00000448732 PIP4K2AP48426 406 aaPredicted RBP30.88■■■□□ 2.53
R3HDM2-208ENST00000448732 RASSF7Q02833 373 aa30.88■■■□□ 2.53
R3HDM2-208ENST00000448732 KDM2BQ8NHM5 1336 aa30.88■■■□□ 2.53
R3HDM2-208ENST00000448732 NEFMP07197 916 aa30.87■■■□□ 2.53
R3HDM2-208ENST00000448732 CLEC4GQ6UXB4 293 aa30.87■■■□□ 2.53
R3HDM2-208ENST00000448732 PLEKHF1Q96S99 279 aa30.87■■■□□ 2.53
R3HDM2-208ENST00000448732 LMNB1P20700 586 aa30.86■■■□□ 2.53
R3HDM2-208ENST00000448732 CCDC24Q8N4L8 307 aa30.86■■■□□ 2.53
R3HDM2-208ENST00000448732 BCORQ6W2J9 1755 aa30.85■■■□□ 2.53
R3HDM2-208ENST00000448732 ZC3H4Q9UPT8 1303 aaKnown RBP30.85■■■□□ 2.53
R3HDM2-208ENST00000448732 ZNF622Q969S3 477 aaKnown RBP eCLIP30.85■■■□□ 2.53
R3HDM2-208ENST00000448732 NBPF26B4DH59 902 aa30.84■■■□□ 2.53
R3HDM2-208ENST00000448732 PRELPP51888 382 aa30.84■■■□□ 2.53
R3HDM2-208ENST00000448732 NBPF10Q6P3W6 841 aaKnown RBP30.84■■■□□ 2.53
R3HDM2-208ENST00000448732 NBPF15Q8N660 670 aa30.84■■■□□ 2.53
R3HDM2-208ENST00000448732 CNBD1Q8NA66 436 aa30.84■■■□□ 2.53
R3HDM2-208ENST00000448732 RBM46Q8TBY0 533 aaKnown RBP30.83■■■□□ 2.53
R3HDM2-208ENST00000448732 MIS18AQ9NYP9 233 aa30.83■■■□□ 2.53
R3HDM2-208ENST00000448732 RGL2O15211 777 aa30.82■■■□□ 2.52
R3HDM2-208ENST00000448732 PNISRQ8TF01 805 aaKnown RBP30.82■■■□□ 2.52
R3HDM2-208ENST00000448732 DLG5Q8TDM6 1919 aa30.81■■■□□ 2.52
R3HDM2-208ENST00000448732 NFKBIEO00221 500 aa30.81■■■□□ 2.52
R3HDM2-208ENST00000448732 APLP1P51693 650 aa30.81■■■□□ 2.52
R3HDM2-208ENST00000448732 ST5P78524 1137 aa30.81■■■□□ 2.52
R3HDM2-208ENST00000448732 C16orf71Q8IYS4 520 aaPredicted RBP30.81■■■□□ 2.52
R3HDM2-208ENST00000448732 PNNQ9H307 717 aaKnown RBP30.81■■■□□ 2.52
R3HDM2-208ENST00000448732 RRAGCQ9HB90 399 aa30.81■■■□□ 2.52
R3HDM2-208ENST00000448732 ZNF652Q9Y2D9 606 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms