RNA–Protein interactions for RNA: ENST00000447515.5

GGA1-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-213ENST00000447515 USPL1Q5W0Q7 1092 aa20.42■□□□□ 0.86
GGA1-213ENST00000447515 INTS5Q6P9B9 1019 aaKnown RBP20.42■□□□□ 0.86
GGA1-213ENST00000447515 NFATC2IPQ8NCF5 419 aa20.42■□□□□ 0.86
GGA1-213ENST00000447515 DLEC1Q9Y238 1755 aa20.41■□□□□ 0.86
GGA1-213ENST00000447515 POTECB2RU33 542 aa20.41■□□□□ 0.86
GGA1-213ENST00000447515 LMNB1P20700 586 aa20.41■□□□□ 0.86
GGA1-213ENST00000447515 PLEKHO1Q53GL0 409 aaPredicted RBP20.41■□□□□ 0.86
GGA1-213ENST00000447515 PANK3Q9H999 370 aa20.4■□□□□ 0.86
GGA1-213ENST00000447515 ZC3H4Q9UPT8 1303 aaKnown RBP20.39■□□□□ 0.85
GGA1-213ENST00000447515 MTHFSP49914 203 aa20.39■□□□□ 0.85
GGA1-213ENST00000447515 AEBP1Q8IUX7 1158 aa20.38■□□□□ 0.85
GGA1-213ENST00000447515 NRXN2Q9P2S2 1712 aa20.38■□□□□ 0.85
GGA1-213ENST00000447515 NFKBIEO00221 500 aa20.37■□□□□ 0.85
GGA1-213ENST00000447515 ZPR1O75312 459 aa20.37■□□□□ 0.85
GGA1-213ENST00000447515 NFIXQ14938 502 aa20.37■□□□□ 0.85
GGA1-213ENST00000447515 DNAJC10Q8IXB1 793 aa20.37■□□□□ 0.85
GGA1-213ENST00000447515 SCN11AQ9UI33 1791 aa20.36■□□□□ 0.85
GGA1-213ENST00000447515 MKRN1Q9UHC7 482 aaKnown RBP20.36■□□□□ 0.85
GGA1-213ENST00000447515 CARMIL3Q8ND23 1372 aa20.34■□□□□ 0.85
GGA1-213ENST00000447515 SOS1Q07889 1333 aaPredicted RBP20.34■□□□□ 0.85
GGA1-213ENST00000447515 DICER1Q9UPY3 1922 aaKnown RBP20.34■□□□□ 0.85
GGA1-213ENST00000447515 AMOTQ4VCS5 1084 aa20.34■□□□□ 0.85
GGA1-213ENST00000447515 C2CD5Q86YS7 1000 aa20.34■□□□□ 0.85
GGA1-213ENST00000447515 TTLL6Q8N841 843 aa20.34■□□□□ 0.85
GGA1-213ENST00000447515 BCL2L12Q9HB09 334 aa20.34■□□□□ 0.85
GGA1-213ENST00000447515 C1orf141Q5JVX7 400 aa20.33■□□□□ 0.85
GGA1-213ENST00000447515 SERPINB2P05120 415 aa20.32■□□□□ 0.84
GGA1-213ENST00000447515 POTEIP0CG38 1075 aa20.32■□□□□ 0.84
GGA1-213ENST00000447515 POTEJP0CG39 1038 aa20.32■□□□□ 0.84
GGA1-213ENST00000447515 ANKRD31Q8N7Z5 1873 aa20.31■□□□□ 0.84
GGA1-213ENST00000447515 FOXN1O15353 648 aa20.31■□□□□ 0.84
GGA1-213ENST00000447515 ZNF219Q9P2Y4 722 aaPredicted RBP20.31■□□□□ 0.84
GGA1-213ENST00000447515 NARFQ9UHQ1 456 aa20.31■□□□□ 0.84
GGA1-213ENST00000447515 VIRMAQ69YN4 1812 aaKnown RBP20.31■□□□□ 0.84
GGA1-213ENST00000447515 CYP19A1P11511 503 aaPredicted RBP20.3■□□□□ 0.84
GGA1-213ENST00000447515 FER1L6Q2WGJ9 1857 aa20.3■□□□□ 0.84
GGA1-213ENST00000447515 SLC39A6Q13433 755 aa20.29■□□□□ 0.84
GGA1-213ENST00000447515 CREBZFQ9NS37 354 aa20.29■□□□□ 0.84
GGA1-213ENST00000447515 ZBTB1Q9Y2K1 713 aa20.29■□□□□ 0.84
GGA1-213ENST00000447515 KNSTRNQ9Y448 316 aa20.29■□□□□ 0.84
GGA1-213ENST00000447515 COL15A1P39059 1388 aa20.29■□□□□ 0.84
GGA1-213ENST00000447515 H0YIN7 160 aa20.28■□□□□ 0.84
GGA1-213ENST00000447515 CHADLQ6NUI6 762 aa20.28■□□□□ 0.84
GGA1-213ENST00000447515 LGR6Q9HBX8 967 aa20.28■□□□□ 0.84
GGA1-213ENST00000447515 COL11A2P13942 1736 aaPredicted RBP20.27■□□□□ 0.84
GGA1-213ENST00000447515 SULT6B1Q6IMI4 303 aa20.27■□□□□ 0.84
GGA1-213ENST00000447515 DPY19L2Q6NUT2 758 aa20.27■□□□□ 0.84
GGA1-213ENST00000447515 BICDL1Q6ZP65 573 aa20.27■□□□□ 0.84
GGA1-213ENST00000447515 CACNA1SQ13698 1873 aa20.26■□□□□ 0.83
GGA1-213ENST00000447515 C21orf2O43822 256 aa20.26■□□□□ 0.83
GGA1-213ENST00000447515 ERFEQ4G0M1 354 aa20.26■□□□□ 0.83
GGA1-213ENST00000447515 CCDC24Q8N4L8 307 aa20.26■□□□□ 0.83
GGA1-213ENST00000447515 ZNF622Q969S3 477 aaKnown RBP eCLIP20.26■□□□□ 0.83
GGA1-213ENST00000447515 DDNO94850 711 aaPredicted RBP20.25■□□□□ 0.83
GGA1-213ENST00000447515 SLC52A2Q9HAB3 445 aa20.25■□□□□ 0.83
GGA1-213ENST00000447515 CNTNAP1P78357 1384 aa20.23■□□□□ 0.83
GGA1-213ENST00000447515 SLX4Q8IY92 1834 aa20.23■□□□□ 0.83
GGA1-213ENST00000447515 PER1O15534 1290 aaPredicted RBP20.23■□□□□ 0.83
GGA1-213ENST00000447515 CANXP27824 592 aaKnown RBP20.23■□□□□ 0.83
GGA1-213ENST00000447515 AKAP4Q5JQC9 854 aa20.21■□□□□ 0.83
GGA1-213ENST00000447515 TBC1D9BQ66K14 1250 aa20.21■□□□□ 0.83
GGA1-213ENST00000447515 PRDM10Q9NQV6 1147 aa20.21■□□□□ 0.83
GGA1-213ENST00000447515 MRC1P22897 1456 aa20.2■□□□□ 0.82
GGA1-213ENST00000447515 RNMTO43148 476 aaKnown RBP20.2■□□□□ 0.82
GGA1-213ENST00000447515 SLC34A2O95436 690 aa20.2■□□□□ 0.82
GGA1-213ENST00000447515 VEGFBP49765 207 aa20.2■□□□□ 0.82
GGA1-213ENST00000447515 CNGB1Q14028 1251 aaPredicted RBP20.2■□□□□ 0.82
GGA1-213ENST00000447515 AMER1Q5JTC6 1135 aaPredicted RBP20.2■□□□□ 0.82
GGA1-213ENST00000447515 PASKQ96RG2 1323 aa20.2■□□□□ 0.82
GGA1-213ENST00000447515 IL13P35225 146 aa20.19■□□□□ 0.82
GGA1-213ENST00000447515 MORC1Q86VD1 984 aa20.19■□□□□ 0.82
GGA1-213ENST00000447515 UBR2Q8IWV8 1755 aa20.18■□□□□ 0.82
GGA1-213ENST00000447515 CTCFP49711 727 aaPredicted RBP20.18■□□□□ 0.82
GGA1-213ENST00000447515 DDX10Q13206 875 aaKnown RBP20.18■□□□□ 0.82
GGA1-213ENST00000447515 CC2D1BQ5T0F9 858 aaKnown RBP20.18■□□□□ 0.82
GGA1-213ENST00000447515 PRR5LQ6MZQ0 368 aa20.18■□□□□ 0.82
GGA1-213ENST00000447515 LBX1P52954 281 aa20.17■□□□□ 0.82
GGA1-213ENST00000447515 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
GGA1-213ENST00000447515 BRIP1Q9BX63 1249 aa20.17■□□□□ 0.82
GGA1-213ENST00000447515 TAOK3Q9H2K8 898 aa20.17■□□□□ 0.82
GGA1-213ENST00000447515 SCN4AP35499 1836 aa20.16■□□□□ 0.82
GGA1-213ENST00000447515 ZNF316A6NFI3 1004 aaPredicted RBP20.16■□□□□ 0.82
GGA1-213ENST00000447515 PDE6BP35913 854 aa20.16■□□□□ 0.82
GGA1-213ENST00000447515 LTBP3Q9NS15 1303 aa20.16■□□□□ 0.82
GGA1-213ENST00000447515 SCN7AQ01118 1682 aa20.16■□□□□ 0.82
GGA1-213ENST00000447515 AIDAQ96BJ3 306 aa20.15■□□□□ 0.82
GGA1-213ENST00000447515 TAF1DQ9H5J8 278 aaPredicted RBP20.15■□□□□ 0.82
GGA1-213ENST00000447515 WBP1LQ9NX94 342 aa20.15■□□□□ 0.82
GGA1-213ENST00000447515 TBC1D2BQ9UPU7 963 aa20.15■□□□□ 0.82
GGA1-213ENST00000447515 ARFGEF2Q9Y6D5 1785 aa20.14■□□□□ 0.81
GGA1-213ENST00000447515 ITGBL1O95965 494 aaPredicted RBP20.14■□□□□ 0.81
GGA1-213ENST00000447515 LDHDQ86WU2 507 aa20.14■□□□□ 0.81
GGA1-213ENST00000447515 VSIG10Q8N0Z9 540 aa20.14■□□□□ 0.81
GGA1-213ENST00000447515 TMEM88BA6NKF7 163 aa20.13■□□□□ 0.81
GGA1-213ENST00000447515 HMOX1P09601 288 aa20.13■□□□□ 0.81
GGA1-213ENST00000447515 FAM161AQ3B820 660 aa20.13■□□□□ 0.81
GGA1-213ENST00000447515 ZNF330Q9Y3S2 320 aaPredicted RBP20.13■□□□□ 0.81
GGA1-213ENST00000447515 MTHFSDQ2M296 383 aaKnown RBP20.12■□□□□ 0.81
GGA1-213ENST00000447515 EAPPQ56P03 285 aaPredicted RBP20.12■□□□□ 0.81
GGA1-213ENST00000447515 PRPF40BQ6NWY9 871 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms