RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 A0A087WZG4 1122 aa20.73■□□□□ 0.91
HMGB2-203ENST00000446922 ZNF496Q96IT1 587 aaPredicted RBP20.73■□□□□ 0.91
HMGB2-203ENST00000446922 PNNQ9H307 717 aaKnown RBP20.73■□□□□ 0.91
HMGB2-203ENST00000446922 PXDNLA1KZ92 1463 aa20.73■□□□□ 0.91
HMGB2-203ENST00000446922 SIPA1L3O60292 1781 aaPredicted RBP20.72■□□□□ 0.91
HMGB2-203ENST00000446922 BTBD11A6QL63 1104 aa20.72■□□□□ 0.91
HMGB2-203ENST00000446922 NEFMP07197 916 aa20.72■□□□□ 0.91
HMGB2-203ENST00000446922 ZBTB1Q9Y2K1 713 aa20.72■□□□□ 0.91
HMGB2-203ENST00000446922 COL15A1P39059 1388 aa20.72■□□□□ 0.91
HMGB2-203ENST00000446922 EIF5P55010 431 aaKnown RBP20.71■□□□□ 0.91
HMGB2-203ENST00000446922 USPL1Q5W0Q7 1092 aa20.71■□□□□ 0.91
HMGB2-203ENST00000446922 RALBP1Q15311 655 aa20.7■□□□□ 0.9
HMGB2-203ENST00000446922 A0A0G2JLW4 131 aa20.69■□□□□ 0.9
HMGB2-203ENST00000446922 POLRMTO00411 1230 aaKnown RBP20.69■□□□□ 0.9
HMGB2-203ENST00000446922 IL6STP40189 918 aaPredicted RBP20.69■□□□□ 0.9
HMGB2-203ENST00000446922 KIAA1551Q9HCM1 1747 aa20.68■□□□□ 0.9
HMGB2-203ENST00000446922 DDR1Q08345 913 aa20.68■□□□□ 0.9
HMGB2-203ENST00000446922 DPEP1P16444 411 aa20.67■□□□□ 0.9
HMGB2-203ENST00000446922 KCNA3P22001 575 aa20.67■□□□□ 0.9
HMGB2-203ENST00000446922 CANXP27824 592 aaKnown RBP20.67■□□□□ 0.9
HMGB2-203ENST00000446922 PIM2Q9P1W9 311 aa20.67■□□□□ 0.9
HMGB2-203ENST00000446922 NPM2Q86SE8 214 aaKnown RBP20.66■□□□□ 0.9
HMGB2-203ENST00000446922 NFIXQ14938 502 aa20.65■□□□□ 0.9
HMGB2-203ENST00000446922 TAF7Q15545 349 aaPredicted RBP20.65■□□□□ 0.9
HMGB2-203ENST00000446922 PLEKHF1Q96S99 279 aa20.65■□□□□ 0.9
HMGB2-203ENST00000446922 BCL2L12Q9HB09 334 aa20.65■□□□□ 0.9
HMGB2-203ENST00000446922 BCS1LQ9Y276 419 aa20.65■□□□□ 0.9
HMGB2-203ENST00000446922 ADCY9O60503 1353 aa20.64■□□□□ 0.89
HMGB2-203ENST00000446922 SNRPA1P09661 255 aaKnown RBP20.64■□□□□ 0.89
HMGB2-203ENST00000446922 MCM10Q7L590 875 aa20.64■□□□□ 0.89
HMGB2-203ENST00000446922 PNISRQ8TF01 805 aaKnown RBP20.64■□□□□ 0.89
HMGB2-203ENST00000446922 N4BP2Q86UW6 1770 aaPredicted RBP20.64■□□□□ 0.89
HMGB2-203ENST00000446922 GIGYF1O75420 1035 aaPredicted RBP20.63■□□□□ 0.89
HMGB2-203ENST00000446922 SERPINB2P05120 415 aa20.63■□□□□ 0.89
HMGB2-203ENST00000446922 C1QTNF8P60827 252 aa20.63■□□□□ 0.89
HMGB2-203ENST00000446922 KCNQ3O43525 872 aa20.62■□□□□ 0.89
HMGB2-203ENST00000446922 DALRD3Q5D0E6 543 aaKnown RBP20.62■□□□□ 0.89
HMGB2-203ENST00000446922 PDZRN3Q9UPQ7 1066 aa20.62■□□□□ 0.89
HMGB2-203ENST00000446922 ATP10DQ9P241 1426 aa20.61■□□□□ 0.89
HMGB2-203ENST00000446922 RGL2O15211 777 aa20.61■□□□□ 0.89
HMGB2-203ENST00000446922 A1BGP04217 495 aa20.61■□□□□ 0.89
HMGB2-203ENST00000446922 NFE2L2Q16236 605 aa20.61■□□□□ 0.89
HMGB2-203ENST00000446922 WWC3Q9ULE0 1092 aa20.61■□□□□ 0.89
HMGB2-203ENST00000446922 NRXN2Q9P2S2 1712 aa20.61■□□□□ 0.89
HMGB2-203ENST00000446922 BRCA1P38398 1863 aaKnown RBP20.6■□□□□ 0.89
HMGB2-203ENST00000446922 USP16Q9Y5T5 823 aa20.6■□□□□ 0.89
HMGB2-203ENST00000446922 DCTN1Q14203 1278 aa20.59■□□□□ 0.89
HMGB2-203ENST00000446922 CLEC4GQ6UXB4 293 aa20.59■□□□□ 0.89
HMGB2-203ENST00000446922 ARHGAP27Q6ZUM4 889 aa20.59■□□□□ 0.89
HMGB2-203ENST00000446922 GPBP1L1Q9HC44 474 aaPredicted RBP20.59■□□□□ 0.89
HMGB2-203ENST00000446922 MAPK8IP3Q9UPT6 1336 aa20.58■□□□□ 0.89
HMGB2-203ENST00000446922 DDX10Q13206 875 aaKnown RBP20.58■□□□□ 0.89
HMGB2-203ENST00000446922 TBC1D2BQ9UPU7 963 aa20.58■□□□□ 0.89
HMGB2-203ENST00000446922 ARFGEF1Q9Y6D6 1849 aa20.57■□□□□ 0.88
HMGB2-203ENST00000446922 MYBBP1AQ9BQG0 1328 aaKnown RBP20.56■□□□□ 0.88
HMGB2-203ENST00000446922 AFDNP55196 1824 aaKnown RBP20.56■□□□□ 0.88
HMGB2-203ENST00000446922 CAMTA2O94983 1202 aa20.56■□□□□ 0.88
HMGB2-203ENST00000446922 TBC1D9BQ66K14 1250 aa20.56■□□□□ 0.88
HMGB2-203ENST00000446922 DZIP3Q86Y13 1208 aaKnown RBP20.56■□□□□ 0.88
HMGB2-203ENST00000446922 CHRNA5P30532 468 aa20.55■□□□□ 0.88
HMGB2-203ENST00000446922 SETDB2Q96T68 719 aa20.55■□□□□ 0.88
HMGB2-203ENST00000446922 BRIP1Q9BX63 1249 aa20.55■□□□□ 0.88
HMGB2-203ENST00000446922 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
HMGB2-203ENST00000446922 CARMIL3Q8ND23 1372 aa20.55■□□□□ 0.88
HMGB2-203ENST00000446922 H0YIN7 160 aa20.54■□□□□ 0.88
HMGB2-203ENST00000446922 PDE6BP35913 854 aa20.54■□□□□ 0.88
HMGB2-203ENST00000446922 BABAM1Q9NWV8 329 aa20.54■□□□□ 0.88
HMGB2-203ENST00000446922 ZNF652Q9Y2D9 606 aa20.54■□□□□ 0.88
HMGB2-203ENST00000446922 SCN7AQ01118 1682 aa20.54■□□□□ 0.88
HMGB2-203ENST00000446922 BICDL1Q6ZP65 573 aa20.53■□□□□ 0.88
HMGB2-203ENST00000446922 TTLL6Q8N841 843 aa20.53■□□□□ 0.88
HMGB2-203ENST00000446922 DLG5Q8TDM6 1919 aa20.53■□□□□ 0.88
HMGB2-203ENST00000446922 PRAMEF22A3QJZ6 481 aa20.52■□□□□ 0.88
HMGB2-203ENST00000446922 EIF4A1P60842 406 aaKnown RBP20.51■□□□□ 0.87
HMGB2-203ENST00000446922 LMOD3Q0VAK6 560 aa20.51■□□□□ 0.87
HMGB2-203ENST00000446922 C2CD5Q86YS7 1000 aa20.51■□□□□ 0.87
HMGB2-203ENST00000446922 NBPF26B4DH59 902 aa20.5■□□□□ 0.87
HMGB2-203ENST00000446922 PRR5LQ6MZQ0 368 aa20.5■□□□□ 0.87
HMGB2-203ENST00000446922 NBPF10Q6P3W6 841 aaKnown RBP20.5■□□□□ 0.87
HMGB2-203ENST00000446922 NBPF15Q8N660 670 aa20.5■□□□□ 0.87
HMGB2-203ENST00000446922 MIS18AQ9NYP9 233 aa20.5■□□□□ 0.87
HMGB2-203ENST00000446922 RIPK4P57078 832 aa20.49■□□□□ 0.87
HMGB2-203ENST00000446922 DLEC1Q9Y238 1755 aa20.49■□□□□ 0.87
HMGB2-203ENST00000446922 TMPOP42166 694 aaKnown RBP20.48■□□□□ 0.87
HMGB2-203ENST00000446922 ST5P78524 1137 aa20.48■□□□□ 0.87
HMGB2-203ENST00000446922 C9orf131Q5VYM1 1079 aa20.48■□□□□ 0.87
HMGB2-203ENST00000446922 CNBD1Q8NA66 436 aa20.48■□□□□ 0.87
HMGB2-203ENST00000446922 BCORQ6W2J9 1755 aa20.48■□□□□ 0.87
HMGB2-203ENST00000446922 KDM3BQ7LBC6 1761 aa20.48■□□□□ 0.87
HMGB2-203ENST00000446922 ZC3H4Q9UPT8 1303 aaKnown RBP20.48■□□□□ 0.87
HMGB2-203ENST00000446922 ERVV-1B6SEH8 477 aa20.47■□□□□ 0.87
HMGB2-203ENST00000446922 ZNF526Q8TF50 670 aaPredicted RBP20.47■□□□□ 0.87
HMGB2-203ENST00000446922 ERBB4Q15303 1308 aa20.47■□□□□ 0.87
HMGB2-203ENST00000446922 SENP3-EIF4A1A0A087X0R7 540 aa20.46■□□□□ 0.87
HMGB2-203ENST00000446922 TPTE2Q6XPS3 522 aa20.46■□□□□ 0.87
HMGB2-203ENST00000446922 KIF3CO14782 793 aa20.45■□□□□ 0.86
HMGB2-203ENST00000446922 NPHP1O15259 732 aa20.45■□□□□ 0.86
HMGB2-203ENST00000446922 PIP4K2AP48426 406 aaPredicted RBP20.45■□□□□ 0.86
HMGB2-203ENST00000446922 WDR43Q15061 677 aaKnown RBP eCLIP20.45■□□□□ 0.861e-11■■■□□ 16.2
HMGB2-203ENST00000446922 STYK1Q6J9G0 422 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms