RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 ZNF790Q6PG37 636 aa20.69■□□□□ 0.9
LAPTM4B-201ENST00000445593 TOM1L2Q6ZVM7 507 aa20.69■□□□□ 0.9
LAPTM4B-201ENST00000445593 PA2G4Q9UQ80 394 aaKnown RBP20.69■□□□□ 0.9
LAPTM4B-201ENST00000445593 PHKG2P15735 406 aa20.69■□□□□ 0.9
LAPTM4B-201ENST00000445593 CASC1Q6TDU7 716 aa20.69■□□□□ 0.9
LAPTM4B-201ENST00000445593 ZNF496Q96IT1 587 aaPredicted RBP20.69■□□□□ 0.9
LAPTM4B-201ENST00000445593 MEGF6O75095 1541 aa20.68■□□□□ 0.9
LAPTM4B-201ENST00000445593 CYP27B1O15528 508 aa20.68■□□□□ 0.9
LAPTM4B-201ENST00000445593 UNC5CLQ8IV45 518 aa20.68■□□□□ 0.9
LAPTM4B-201ENST00000445593 SOS1Q07889 1333 aaPredicted RBP20.68■□□□□ 0.9
LAPTM4B-201ENST00000445593 SPG7Q9UQ90 795 aa20.68■□□□□ 0.9
LAPTM4B-201ENST00000445593 TRPM3Q9HCF6 1732 aaPredicted RBP20.67■□□□□ 0.9
LAPTM4B-201ENST00000445593 SLC52A2Q9HAB3 445 aa20.67■□□□□ 0.9
LAPTM4B-201ENST00000445593 SPATA31A3Q5VYP0 1347 aa20.67■□□□□ 0.9
LAPTM4B-201ENST00000445593 GSE1Q14687 1217 aa20.66■□□□□ 0.9
LAPTM4B-201ENST00000445593 RIC3Q7Z5B4 369 aa20.66■□□□□ 0.9
LAPTM4B-201ENST00000445593 TTC5Q8N0Z6 440 aa20.66■□□□□ 0.9
LAPTM4B-201ENST00000445593 DDX54Q8TDD1 881 aaKnown RBP20.66■□□□□ 0.9
LAPTM4B-201ENST00000445593 GZF1Q9H116 711 aaPredicted RBP20.66■□□□□ 0.9
LAPTM4B-201ENST00000445593 IFNL2Q8IZJ0 200 aa20.66■□□□□ 0.9
LAPTM4B-201ENST00000445593 USP16Q9Y5T5 823 aa20.66■□□□□ 0.9
LAPTM4B-201ENST00000445593 NOL8Q76FK4 1167 aaKnown RBP20.65■□□□□ 0.9
LAPTM4B-201ENST00000445593 IBTKQ9P2D0 1353 aaPredicted RBP20.65■□□□□ 0.9
LAPTM4B-201ENST00000445593 TNS3Q68CZ2 1445 aa20.65■□□□□ 0.9
LAPTM4B-201ENST00000445593 HOXB7P09629 217 aa20.64■□□□□ 0.89
LAPTM4B-201ENST00000445593 USP26Q9BXU7 913 aa20.64■□□□□ 0.89
LAPTM4B-201ENST00000445593 SIL1Q9H173 461 aa20.64■□□□□ 0.89
LAPTM4B-201ENST00000445593 XAGE3Q8WTP9 111 aa20.64■□□□□ 0.89
LAPTM4B-201ENST00000445593 SLAIN2Q9P270 581 aa20.64■□□□□ 0.89
LAPTM4B-201ENST00000445593 KSR2Q6VAB6 950 aa20.63■□□□□ 0.89
LAPTM4B-201ENST00000445593 KDM6AO15550 1401 aaPredicted RBP20.63■□□□□ 0.89
LAPTM4B-201ENST00000445593 CABP4P57796 275 aa20.63■□□□□ 0.89
LAPTM4B-201ENST00000445593 COPS6Q7L5N1 327 aa20.63■□□□□ 0.89
LAPTM4B-201ENST00000445593 RHPN1Q8TCX5 695 aa20.63■□□□□ 0.89
LAPTM4B-201ENST00000445593 SSH3Q8TE77 659 aa20.63■□□□□ 0.89
LAPTM4B-201ENST00000445593 ANO2Q9NQ90 1003 aa20.63■□□□□ 0.89
LAPTM4B-201ENST00000445593 KLHDC4Q8TBB5 520 aa20.62■□□□□ 0.89
LAPTM4B-201ENST00000445593 CHMP5Q9NZZ3 219 aa20.62■□□□□ 0.89
LAPTM4B-201ENST00000445593 KDM4FA0A1W2PPD8 638 aa20.62■□□□□ 0.89
LAPTM4B-201ENST00000445593 BRPF3Q9ULD4 1205 aa20.62■□□□□ 0.89
LAPTM4B-201ENST00000445593 ZNF330Q9Y3S2 320 aaPredicted RBP20.62■□□□□ 0.89
LAPTM4B-201ENST00000445593 PTCD1O75127 700 aaKnown RBP20.61■□□□□ 0.89
LAPTM4B-201ENST00000445593 MYD88Q99836 296 aa20.61■□□□□ 0.89
LAPTM4B-201ENST00000445593 ERC2O15083 957 aa20.6■□□□□ 0.89
LAPTM4B-201ENST00000445593 ZMYND15Q9H091 742 aa20.6■□□□□ 0.89
LAPTM4B-201ENST00000445593 KIF1AQ12756 1690 aa20.6■□□□□ 0.89
LAPTM4B-201ENST00000445593 ATP5J2-PTCD1G3V325 749 aa20.6■□□□□ 0.89
LAPTM4B-201ENST00000445593 K7ELQ4 463 aaPredicted RBP20.6■□□□□ 0.89
LAPTM4B-201ENST00000445593 HYPKQ9NX55 129 aa20.6■□□□□ 0.89
LAPTM4B-201ENST00000445593 PDIA6Q15084 440 aa20.6■□□□□ 0.89
LAPTM4B-201ENST00000445593 DDX21Q9NR30 783 aaKnown RBP eCLIP20.6■□□□□ 0.89
LAPTM4B-201ENST00000445593 SUCLG2Q96I99 432 aa20.59■□□□□ 0.89
LAPTM4B-201ENST00000445593 LMO7Q8WWI1 1683 aa20.59■□□□□ 0.89
LAPTM4B-201ENST00000445593 EVA1CP58658 441 aa20.58■□□□□ 0.89
LAPTM4B-201ENST00000445593 IL25Q9H293 177 aa20.58■□□□□ 0.89
LAPTM4B-201ENST00000445593 NCAPD2Q15021 1401 aa20.58■□□□□ 0.89
LAPTM4B-201ENST00000445593 BICC1Q9H694 974 aaKnown RBP20.58■□□□□ 0.89
LAPTM4B-201ENST00000445593 ALS2Q96Q42 1657 aa20.58■□□□□ 0.88
LAPTM4B-201ENST00000445593 REC8O95072 547 aa20.58■□□□□ 0.88
LAPTM4B-201ENST00000445593 DDX58O95786 925 aaKnown RBP20.58■□□□□ 0.88
LAPTM4B-201ENST00000445593 SNX21Q969T3 373 aa20.58■□□□□ 0.88
LAPTM4B-201ENST00000445593 KDM3BQ7LBC6 1761 aa20.58■□□□□ 0.88
LAPTM4B-201ENST00000445593 CCDC9Q9Y3X0 531 aaKnown RBP20.57■□□□□ 0.88
LAPTM4B-201ENST00000445593 KAT6BQ8WYB5 2073 aa20.57■□□□□ 0.88
LAPTM4B-201ENST00000445593 SALL3Q9BXA9 1300 aa20.57■□□□□ 0.88
LAPTM4B-201ENST00000445593 DCAF5Q96JK2 942 aa20.57■□□□□ 0.88
LAPTM4B-201ENST00000445593 GRM8O00222 908 aa20.56■□□□□ 0.88
LAPTM4B-201ENST00000445593 LARP1Q6PKG0 1096 aaKnown RBP20.56■□□□□ 0.88
LAPTM4B-201ENST00000445593 CHMP4AQ9BY43 222 aa20.56■□□□□ 0.88
LAPTM4B-201ENST00000445593 OSBPL3Q9H4L5 887 aa20.56■□□□□ 0.88
LAPTM4B-201ENST00000445593 IGKV5-2P06315 115 aa20.56■□□□□ 0.88
LAPTM4B-201ENST00000445593 POLA2Q14181 598 aa20.56■□□□□ 0.88
LAPTM4B-201ENST00000445593 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
LAPTM4B-201ENST00000445593 KIF1BPQ96EK5 621 aa20.56■□□□□ 0.88
LAPTM4B-201ENST00000445593 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.56■□□□□ 0.88
LAPTM4B-201ENST00000445593 PHRF1Q9P1Y6 1649 aaKnown RBP20.55■□□□□ 0.88
LAPTM4B-201ENST00000445593 ESYT1Q9BSJ8 1104 aa20.55■□□□□ 0.88
LAPTM4B-201ENST00000445593 PALD1Q9ULE6 856 aa20.55■□□□□ 0.88
LAPTM4B-201ENST00000445593 CACNA1FO60840 1977 aa20.55■□□□□ 0.88
LAPTM4B-201ENST00000445593 A0A0G2JS52 829 aa20.55■□□□□ 0.88
LAPTM4B-201ENST00000445593 CHMLP26374 656 aa20.55■□□□□ 0.88
LAPTM4B-201ENST00000445593 MCM4P33991 863 aa20.55■□□□□ 0.88
LAPTM4B-201ENST00000445593 PXDNLA1KZ92 1463 aa20.55■□□□□ 0.88
LAPTM4B-201ENST00000445593 NEXNQ0ZGT2 675 aa20.54■□□□□ 0.88
LAPTM4B-201ENST00000445593 LINS1Q8NG48 757 aa20.54■□□□□ 0.88
LAPTM4B-201ENST00000445593 RABEP1Q15276 862 aa20.54■□□□□ 0.88
LAPTM4B-201ENST00000445593 FOXD4L5Q5VV16 416 aaPredicted RBP20.54■□□□□ 0.88
LAPTM4B-201ENST00000445593 FOXD4L4Q8WXT5 416 aaPredicted RBP20.54■□□□□ 0.88
LAPTM4B-201ENST00000445593 CCDC8Q9H0W5 538 aaPredicted RBP20.54■□□□□ 0.88
LAPTM4B-201ENST00000445593 SNRPA1P09661 255 aaKnown RBP20.54■□□□□ 0.88
LAPTM4B-201ENST00000445593 ZCRB1Q8TBF4 217 aaKnown RBP20.54■□□□□ 0.88
LAPTM4B-201ENST00000445593 FMNL2Q96PY5 1086 aa20.54■□□□□ 0.88
LAPTM4B-201ENST00000445593 DCCP43146 1447 aa20.53■□□□□ 0.88
LAPTM4B-201ENST00000445593 TNPO1Q92973 898 aaKnown RBP20.53■□□□□ 0.88
LAPTM4B-201ENST00000445593 UPF3BQ9BZI7 483 aaKnown RBP20.53■□□□□ 0.88
LAPTM4B-201ENST00000445593 NEK4P51957 841 aa20.53■□□□□ 0.88
LAPTM4B-201ENST00000445593 KAZALD1Q96I82 304 aa20.53■□□□□ 0.88
LAPTM4B-201ENST00000445593 HEG1Q9ULI3 1381 aa20.53■□□□□ 0.88
LAPTM4B-201ENST00000445593 EPHA10Q5JZY3 1008 aa20.52■□□□□ 0.88
LAPTM4B-201ENST00000445593 CWC27Q6UX04 472 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms