RNA–Protein interactions for RNA: ENST00000444811.6

NELFE-206, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-206ENST00000444811 CCDC87Q9NVE4 849 aa25.96■■□□□ 1.75
NELFE-206ENST00000444811 ZBTB1Q9Y2K1 713 aa25.94■■□□□ 1.74
NELFE-206ENST00000444811 RRP7AQ9Y3A4 280 aaKnown RBP25.94■■□□□ 1.74
NELFE-206ENST00000444811 SOS1Q07889 1333 aaPredicted RBP25.93■■□□□ 1.74
NELFE-206ENST00000444811 KDM3BQ7LBC6 1761 aa25.93■■□□□ 1.74
NELFE-206ENST00000444811 MIS18AQ9NYP9 233 aa25.93■■□□□ 1.74
NELFE-206ENST00000444811 PRAMEF22A3QJZ6 481 aa25.9■■□□□ 1.74
NELFE-206ENST00000444811 RFC4P35249 363 aa25.9■■□□□ 1.74
NELFE-206ENST00000444811 TEX13AQ9BXU3 409 aaPredicted RBP25.9■■□□□ 1.74
NELFE-206ENST00000444811 STARD3NLO95772 234 aa25.89■■□□□ 1.74
NELFE-206ENST00000444811 TRIM35Q9UPQ4 493 aa25.89■■□□□ 1.74
NELFE-206ENST00000444811 GYS1P13807 737 aa25.88■■□□□ 1.73
NELFE-206ENST00000444811 LMOD3Q0VAK6 560 aa25.88■■□□□ 1.73
NELFE-206ENST00000444811 NEUROD2Q15784 382 aa25.88■■□□□ 1.73
NELFE-206ENST00000444811 PNISRQ8TF01 805 aaKnown RBP25.88■■□□□ 1.73
NELFE-206ENST00000444811 SRP68Q9UHB9 627 aaKnown RBP25.88■■□□□ 1.73
NELFE-206ENST00000444811 USP16Q9Y5T5 823 aa25.88■■□□□ 1.73
NELFE-206ENST00000444811 USP42Q9H9J4 1324 aaKnown RBP25.88■■□□□ 1.73
NELFE-206ENST00000444811 COL15A1P39059 1388 aa25.86■■□□□ 1.73
NELFE-206ENST00000444811 CANXP27824 592 aaKnown RBP25.86■■□□□ 1.73
NELFE-206ENST00000444811 ZNF784Q8NCA9 323 aaPredicted RBP25.86■■□□□ 1.73
NELFE-206ENST00000444811 MRS2Q9HD23 443 aa25.86■■□□□ 1.73
NELFE-206ENST00000444811 SNRPA1P09661 255 aaKnown RBP25.85■■□□□ 1.73
NELFE-206ENST00000444811 A1BGP04217 495 aa25.84■■□□□ 1.73
NELFE-206ENST00000444811 EIF5P55010 431 aaKnown RBP25.84■■□□□ 1.73
NELFE-206ENST00000444811 EIF4A1P60842 406 aaKnown RBP25.84■■□□□ 1.73
NELFE-206ENST00000444811 NLGN1Q8N2Q7 840 aa25.84■■□□□ 1.73
NELFE-206ENST00000444811 APAF1O14727 1248 aa25.83■■□□□ 1.73
NELFE-206ENST00000444811 KLHL34Q8N239 644 aa25.83■■□□□ 1.73
NELFE-206ENST00000444811 MMP10P09238 476 aa25.82■■□□□ 1.72
NELFE-206ENST00000444811 CHD4Q14839 1912 aa25.82■■□□□ 1.72
NELFE-206ENST00000444811 LAMB4A4D0S4 1761 aa25.82■■□□□ 1.72
NELFE-206ENST00000444811 FKBP8Q14318 412 aa25.81■■□□□ 1.72
NELFE-206ENST00000444811 USPL1Q5W0Q7 1092 aa25.81■■□□□ 1.72
NELFE-206ENST00000444811 NARFQ9UHQ1 456 aa25.81■■□□□ 1.72
NELFE-206ENST00000444811 TSPYL4Q9UJ04 414 aa25.81■■□□□ 1.72
NELFE-206ENST00000444811 IL6STP40189 918 aaPredicted RBP25.8■■□□□ 1.72
NELFE-206ENST00000444811 NLGN2Q8NFZ4 835 aa25.8■■□□□ 1.72
NELFE-206ENST00000444811 BCL2L12Q9HB09 334 aa25.8■■□□□ 1.72
NELFE-206ENST00000444811 BABAM1Q9NWV8 329 aa25.8■■□□□ 1.72
NELFE-206ENST00000444811 GIGYF1O75420 1035 aaPredicted RBP25.79■■□□□ 1.72
NELFE-206ENST00000444811 ZPR1O75312 459 aa25.78■■□□□ 1.72
NELFE-206ENST00000444811 PIP4K2AP48426 406 aaPredicted RBP25.78■■□□□ 1.72
NELFE-206ENST00000444811 CD2APQ9Y5K6 639 aa25.77■■□□□ 1.72
NELFE-206ENST00000444811 NBPF26B4DH59 902 aa25.76■■□□□ 1.71
NELFE-206ENST00000444811 CHL1O00533 1208 aa25.76■■□□□ 1.71
NELFE-206ENST00000444811 NBPF10Q6P3W6 841 aaKnown RBP25.76■■□□□ 1.71
NELFE-206ENST00000444811 NBPF15Q8N660 670 aa25.76■■□□□ 1.71
NELFE-206ENST00000444811 SCN7AQ01118 1682 aa25.75■■□□□ 1.71
NELFE-206ENST00000444811 A0A087WZG4 1122 aa25.75■■□□□ 1.71
NELFE-206ENST00000444811 DDR1Q08345 913 aa25.75■■□□□ 1.71
NELFE-206ENST00000444811 ZNF330Q9Y3S2 320 aaPredicted RBP25.75■■□□□ 1.71
NELFE-206ENST00000444811 TM4SF1P30408 202 aa25.74■■□□□ 1.71
NELFE-206ENST00000444811 KIF13BQ9NQT8 1826 aa25.73■■□□□ 1.71
NELFE-206ENST00000444811 TBC1D2BQ9UPU7 963 aa25.73■■□□□ 1.71
NELFE-206ENST00000444811 PARP3Q9Y6F1 533 aa25.73■■□□□ 1.71
NELFE-206ENST00000444811 C10orf71Q711Q0 1435 aa25.72■■□□□ 1.71
NELFE-206ENST00000444811 BCORQ6W2J9 1755 aa25.72■■□□□ 1.71
NELFE-206ENST00000444811 POLRMTO00411 1230 aaKnown RBP25.71■■□□□ 1.71
NELFE-206ENST00000444811 CAMTA2O94983 1202 aa25.71■■□□□ 1.71
NELFE-206ENST00000444811 NFIXQ14938 502 aa25.71■■□□□ 1.71
NELFE-206ENST00000444811 LAS1LQ9Y4W2 734 aaKnown RBP25.71■■□□□ 1.71
NELFE-206ENST00000444811 SENP3-EIF4A1A0A087X0R7 540 aa25.7■■□□□ 1.7
NELFE-206ENST00000444811 CFAP44Q96MT7 982 aa25.7■■□□□ 1.7
NELFE-206ENST00000444811 KIAA1551Q9HCM1 1747 aa25.7■■□□□ 1.7
NELFE-206ENST00000444811 ZNF853P0CG23 659 aa25.69■■□□□ 1.7
NELFE-206ENST00000444811 DZIP3Q86Y13 1208 aaKnown RBP25.69■■□□□ 1.7
NELFE-206ENST00000444811 KRT24Q2M2I5 525 aa25.68■■□□□ 1.7
NELFE-206ENST00000444811 NRXN2Q9P2S2 1712 aa25.68■■□□□ 1.7
NELFE-206ENST00000444811 GPR162Q16538 588 aa25.67■■□□□ 1.7
NELFE-206ENST00000444811 MBIPQ9NS73 344 aa25.67■■□□□ 1.7
NELFE-206ENST00000444811 AFDNP55196 1824 aaKnown RBP25.67■■□□□ 1.7
NELFE-206ENST00000444811 CCDC27Q2M243 656 aa25.66■■□□□ 1.7
NELFE-206ENST00000444811 TBC1D9BQ66K14 1250 aa25.66■■□□□ 1.7
NELFE-206ENST00000444811 NPM2Q86SE8 214 aaKnown RBP25.66■■□□□ 1.7
NELFE-206ENST00000444811 PXDNLA1KZ92 1463 aa25.66■■□□□ 1.7
NELFE-206ENST00000444811 FAM9BQ8IZU0 186 aa25.65■■□□□ 1.7
NELFE-206ENST00000444811 IFT57Q9NWB7 429 aa25.65■■□□□ 1.7
NELFE-206ENST00000444811 ERBB4Q15303 1308 aa25.64■■□□□ 1.7
NELFE-206ENST00000444811 EIF2S2P20042 333 aaKnown RBP25.63■■□□□ 1.69
NELFE-206ENST00000444811 CALD1Q05682 793 aaKnown RBP25.63■■□□□ 1.69
NELFE-206ENST00000444811 PDIA6Q15084 440 aa25.63■■□□□ 1.69
NELFE-206ENST00000444811 NCBP3Q53F19 620 aaKnown RBP25.63■■□□□ 1.69
NELFE-206ENST00000444811 BICDL1Q6ZP65 573 aa25.63■■□□□ 1.69
NELFE-206ENST00000444811 LRP10Q7Z4F1 713 aa25.63■■□□□ 1.69
NELFE-206ENST00000444811 WWC1Q8IX03 1113 aa25.63■■□□□ 1.69
NELFE-206ENST00000444811 N4BP2Q86UW6 1770 aaPredicted RBP25.62■■□□□ 1.69
NELFE-206ENST00000444811 SERPINB2P05120 415 aa25.62■■□□□ 1.69
NELFE-206ENST00000444811 MYL6BP14649 208 aa25.62■■□□□ 1.69
NELFE-206ENST00000444811 YBX3P16989 372 aaKnown RBP eCLIP25.62■■□□□ 1.693e-7■■■□□ 19.1
NELFE-206ENST00000444811 TGFB2P61812 414 aa25.62■■□□□ 1.69
NELFE-206ENST00000444811 GNAI1P63096 354 aa25.62■■□□□ 1.69
NELFE-206ENST00000444811 NGEFQ8N5V2 710 aa25.61■■□□□ 1.69
NELFE-206ENST00000444811 CEP350Q5VT06 3117 aa25.61■■□□□ 1.69
NELFE-206ENST00000444811 C1QTNF8P60827 252 aa25.6■■□□□ 1.69
NELFE-206ENST00000444811 PROSER3Q2NL68 480 aa25.6■■□□□ 1.69
NELFE-206ENST00000444811 CLEC4GQ6UXB4 293 aa25.6■■□□□ 1.69
NELFE-206ENST00000444811 PELP1Q8IZL8 1130 aaKnown RBP25.6■■□□□ 1.69
NELFE-206ENST00000444811 HOXB7P09629 217 aa25.59■■□□□ 1.69
NELFE-206ENST00000444811 HLFQ16534 295 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms