RNA–Protein interactions for RNA: ENST00000443501.1

FNDC3B-206, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-206ENST00000443501 TRPC6Q9Y210 931 aa11.5□□□□□ -0.57
FNDC3B-206ENST00000443501 PCDH11XQ9BZA7 1347 aa11.5□□□□□ -0.57
FNDC3B-206ENST00000443501 PCDH11YQ9BZA8 1340 aa11.5□□□□□ -0.57
FNDC3B-206ENST00000443501 LOC102724428A0A0B4J2F2 783 aa11.49□□□□□ -0.57
FNDC3B-206ENST00000443501 SIK1P57059 783 aa11.49□□□□□ -0.57
FNDC3B-206ENST00000443501 EVX2Q03828 476 aa11.49□□□□□ -0.57
FNDC3B-206ENST00000443501 PARP3Q9Y6F1 533 aa11.49□□□□□ -0.57
FNDC3B-206ENST00000443501 POTECB2RU33 542 aa11.48□□□□□ -0.57
FNDC3B-206ENST00000443501 HOXC9P31274 260 aa11.48□□□□□ -0.57
FNDC3B-206ENST00000443501 TRAPPC3LQ5T215 181 aa11.48□□□□□ -0.57
FNDC3B-206ENST00000443501 RAPGEF4Q8WZA2 1011 aa11.48□□□□□ -0.57
FNDC3B-206ENST00000443501 PIGBQ92521 554 aa11.48□□□□□ -0.57
FNDC3B-206ENST00000443501 C4AP0C0L4 1744 aa11.48□□□□□ -0.57
FNDC3B-206ENST00000443501 MAP2P11137 1827 aaKnown RBP11.47□□□□□ -0.57
FNDC3B-206ENST00000443501 CD163L1Q9NR16 1453 aa11.47□□□□□ -0.57
FNDC3B-206ENST00000443501 CCDC85CA6NKD9 419 aa11.47□□□□□ -0.57
FNDC3B-206ENST00000443501 LMNB1P20700 586 aa11.47□□□□□ -0.57
FNDC3B-206ENST00000443501 TRIM26Q12899 539 aaPredicted RBP11.47□□□□□ -0.57
FNDC3B-206ENST00000443501 ITPK1Q13572 414 aa11.47□□□□□ -0.57
FNDC3B-206ENST00000443501 NBPF6Q5VWK0 638 aa11.47□□□□□ -0.57
FNDC3B-206ENST00000443501 NBPF4Q96M43 638 aa11.47□□□□□ -0.57
FNDC3B-206ENST00000443501 SBF1O95248 1867 aa11.46□□□□□ -0.57
FNDC3B-206ENST00000443501 HSPA8P11142 646 aaKnown RBP11.46□□□□□ -0.57
FNDC3B-206ENST00000443501 GYS1P13807 737 aa11.46□□□□□ -0.57
FNDC3B-206ENST00000443501 TATP17735 454 aaPredicted RBP11.46□□□□□ -0.57
FNDC3B-206ENST00000443501 VEGFBP49765 207 aa11.46□□□□□ -0.57
FNDC3B-206ENST00000443501 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
FNDC3B-206ENST00000443501 EDC4Q6P2E9 1401 aaKnown RBP11.45□□□□□ -0.58
FNDC3B-206ENST00000443501 MAP3K19Q56UN5 1328 aa11.45□□□□□ -0.58
FNDC3B-206ENST00000443501 CYP27B1O15528 508 aa11.45□□□□□ -0.58
FNDC3B-206ENST00000443501 ATP6V1AP38606 617 aa11.45□□□□□ -0.58
FNDC3B-206ENST00000443501 MFRPQ9BY79 579 aa11.45□□□□□ -0.58
FNDC3B-206ENST00000443501 RTCBQ9Y3I0 505 aaKnown RBP11.45□□□□□ -0.58
FNDC3B-206ENST00000443501 RAB3GAP2Q9H2M9 1393 aa11.44□□□□□ -0.58
FNDC3B-206ENST00000443501 AMPHP49418 695 aa11.44□□□□□ -0.58
FNDC3B-206ENST00000443501 RASSF7Q02833 373 aa11.44□□□□□ -0.58
FNDC3B-206ENST00000443501 ARHGEF1Q92888 912 aaKnown RBP11.44□□□□□ -0.58
FNDC3B-206ENST00000443501 PASKQ96RG2 1323 aa11.43□□□□□ -0.58
FNDC3B-206ENST00000443501 DPY19L2Q6NUT2 758 aa11.43□□□□□ -0.58
FNDC3B-206ENST00000443501 HDGFL2Q7Z4V5 671 aaPredicted RBP11.43□□□□□ -0.58
FNDC3B-206ENST00000443501 EFCAB3Q8N7B9 438 aa11.43□□□□□ -0.58
FNDC3B-206ENST00000443501 RTL1A6NKG5 1358 aa11.42□□□□□ -0.58
FNDC3B-206ENST00000443501 RGPD2P0DJD1 1756 aa11.42□□□□□ -0.58
FNDC3B-206ENST00000443501 CHRNA5P30532 468 aa11.42□□□□□ -0.58
FNDC3B-206ENST00000443501 ZEB1P37275 1124 aaPredicted RBP11.42□□□□□ -0.58
FNDC3B-206ENST00000443501 RC3H1Q5TC82 1133 aaKnown RBP11.42□□□□□ -0.58
FNDC3B-206ENST00000443501 USHBP1Q8N6Y0 703 aa11.42□□□□□ -0.58
FNDC3B-206ENST00000443501 ITGB4P16144 1822 aa11.42□□□□□ -0.58
FNDC3B-206ENST00000443501 RFC4P35249 363 aa11.41□□□□□ -0.58
FNDC3B-206ENST00000443501 MAP2K1Q02750 393 aaPredicted RBP11.41□□□□□ -0.58
FNDC3B-206ENST00000443501 ASAP1Q9ULH1 1129 aa11.41□□□□□ -0.58
FNDC3B-206ENST00000443501 VIRMAQ69YN4 1812 aaKnown RBP11.4□□□□□ -0.58
FNDC3B-206ENST00000443501 TMEM88BA6NKF7 163 aa11.4□□□□□ -0.58
FNDC3B-206ENST00000443501 HAX1O00165 279 aa11.4□□□□□ -0.58
FNDC3B-206ENST00000443501 RPS6KA4O75676 772 aa11.4□□□□□ -0.58
FNDC3B-206ENST00000443501 TMOD3Q9NYL9 352 aa11.4□□□□□ -0.58
FNDC3B-206ENST00000443501 SMG6Q86US8 1419 aaKnown RBP11.4□□□□□ -0.58
FNDC3B-206ENST00000443501 TNRC18O15417 2968 aaPredicted RBP11.4□□□□□ -0.59
FNDC3B-206ENST00000443501 RASSF10A6NK89 507 aa11.39□□□□□ -0.59
FNDC3B-206ENST00000443501 POTEIP0CG38 1075 aa11.39□□□□□ -0.59
FNDC3B-206ENST00000443501 POTEJP0CG39 1038 aa11.39□□□□□ -0.59
FNDC3B-206ENST00000443501 DDR1Q08345 913 aa11.39□□□□□ -0.59
FNDC3B-206ENST00000443501 COG3Q96JB2 828 aa11.39□□□□□ -0.59
FNDC3B-206ENST00000443501 TERF2IPQ9NYB0 399 aa11.39□□□□□ -0.59
FNDC3B-206ENST00000443501 KDRP35968 1356 aa11.39□□□□□ -0.59
FNDC3B-206ENST00000443501 CNTNAP4Q9C0A0 1308 aa11.38□□□□□ -0.59
FNDC3B-206ENST00000443501 TIAM2Q8IVF5 1701 aa11.38□□□□□ -0.59
FNDC3B-206ENST00000443501 FBLN1P23142 703 aa11.38□□□□□ -0.59
FNDC3B-206ENST00000443501 FBXO22Q8NEZ5 403 aa11.38□□□□□ -0.59
FNDC3B-206ENST00000443501 TMC1Q8TDI8 760 aa11.38□□□□□ -0.59
FNDC3B-206ENST00000443501 SLC12A5Q9H2X9 1139 aa11.38□□□□□ -0.59
FNDC3B-206ENST00000443501 ATG3Q9NT62 314 aa11.38□□□□□ -0.59
FNDC3B-206ENST00000443501 A0A1W2PP64 1363 aa11.38□□□□□ -0.59
FNDC3B-206ENST00000443501 NFKBIEO00221 500 aa11.37□□□□□ -0.59
FNDC3B-206ENST00000443501 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
FNDC3B-206ENST00000443501 ITGBL1O95965 494 aaPredicted RBP11.37□□□□□ -0.59
FNDC3B-206ENST00000443501 SLC4A9Q96Q91 983 aa11.37□□□□□ -0.59
FNDC3B-206ENST00000443501 TMEM106CQ9BVX2 250 aa11.37□□□□□ -0.59
FNDC3B-206ENST00000443501 RYDENQ9NUL5 291 aaKnown RBP11.37□□□□□ -0.59
FNDC3B-206ENST00000443501 ZNF831Q5JPB2 1677 aa11.36□□□□□ -0.59
FNDC3B-206ENST00000443501 PPP1R37O75864 691 aa11.36□□□□□ -0.59
FNDC3B-206ENST00000443501 DEFB115Q30KQ5 88 aa11.36□□□□□ -0.59
FNDC3B-206ENST00000443501 LDHDQ86WU2 507 aa11.36□□□□□ -0.59
FNDC3B-206ENST00000443501 WDR33Q9C0J8 1336 aaKnown RBP11.35□□□□□ -0.59
FNDC3B-206ENST00000443501 POLRMTO00411 1230 aaKnown RBP11.35□□□□□ -0.59
FNDC3B-206ENST00000443501 TM4SF1P30408 202 aa11.35□□□□□ -0.59
FNDC3B-206ENST00000443501 TTLL6Q8N841 843 aa11.35□□□□□ -0.59
FNDC3B-206ENST00000443501 SPG7Q9UQ90 795 aa11.35□□□□□ -0.59
FNDC3B-206ENST00000443501 INSRP06213 1382 aa11.35□□□□□ -0.59
FNDC3B-206ENST00000443501 PDE4DIPQ5VU43 2346 aa11.35□□□□□ -0.59
FNDC3B-206ENST00000443501 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
FNDC3B-206ENST00000443501 IQCA1LA6NCM1 817 aa11.34□□□□□ -0.59
FNDC3B-206ENST00000443501 RRS1Q15050 365 aaKnown RBP11.34□□□□□ -0.59
FNDC3B-206ENST00000443501 ERFEQ4G0M1 354 aa11.34□□□□□ -0.59
FNDC3B-206ENST00000443501 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.34□□□□□ -0.592e-47■□□□□ 8.9
FNDC3B-206ENST00000443501 HSP90AB2PQ58FF8 381 aa11.33□□□□□ -0.6
FNDC3B-206ENST00000443501 PRPF38BQ5VTL8 546 aaKnown RBP11.33□□□□□ -0.6
FNDC3B-206ENST00000443501 BEGAINQ9BUH8 593 aa11.33□□□□□ -0.6
FNDC3B-206ENST00000443501 MCOLN1Q9GZU1 580 aa11.33□□□□□ -0.6
FNDC3B-206ENST00000443501 SRP68Q9UHB9 627 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms