RNA–Protein interactions for RNA: ENST00000442528.2

SLC35C1-202, Transcript of solute carrier family 35 member C1, humanhuman

TSL 1 (best) BASIC

Gene SLC35C1, Length 1,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35C1-202ENST00000442528 C4BP0C0L5 1744 aa29.1■■■□□ 2.25
SLC35C1-202ENST00000442528 HMGB2P26583 209 aaKnown RBP29.1■■■□□ 2.25
SLC35C1-202ENST00000442528 STARD3NLO95772 234 aa29.09■■■□□ 2.25
SLC35C1-202ENST00000442528 CYP19A1P11511 503 aaPredicted RBP29.08■■■□□ 2.25
SLC35C1-202ENST00000442528 LINC00116Q8NCU8 138 aa29.08■■■□□ 2.25
SLC35C1-202ENST00000442528 VAMP4O75379 141 aa29.07■■■□□ 2.24
SLC35C1-202ENST00000442528 CT47B1P0C2W7 299 aaPredicted RBP29.06■■■□□ 2.24
SLC35C1-202ENST00000442528 HDGFL1Q5TGJ6 251 aa29.06■■■□□ 2.24
SLC35C1-202ENST00000442528 CNTNAP4Q9C0A0 1308 aa29.05■■■□□ 2.24
SLC35C1-202ENST00000442528 EIF2S2P20042 333 aaKnown RBP29.05■■■□□ 2.24
SLC35C1-202ENST00000442528 CHMP4AQ9BY43 222 aa29.05■■■□□ 2.24
SLC35C1-202ENST00000442528 CRKLP46109 303 aaKnown RBP29.04■■■□□ 2.24
SLC35C1-202ENST00000442528 CACNA1FO60840 1977 aa29.04■■■□□ 2.24
SLC35C1-202ENST00000442528 RC3H1Q5TC82 1133 aaKnown RBP29.02■■■□□ 2.24
SLC35C1-202ENST00000442528 ZNF428Q96B54 188 aa29.02■■■□□ 2.24
SLC35C1-202ENST00000442528 ERBB4Q15303 1308 aa29.02■■■□□ 2.24
SLC35C1-202ENST00000442528 CCDC87Q9NVE4 849 aa29.01■■■□□ 2.23
SLC35C1-202ENST00000442528 UBR3Q6ZT12 1888 aa29.01■■■□□ 2.23
SLC35C1-202ENST00000442528 CCDC30Q5VVM6 783 aa29.01■■■□□ 2.23
SLC35C1-202ENST00000442528 INTS5Q6P9B9 1019 aaKnown RBP29.01■■■□□ 2.23
SLC35C1-202ENST00000442528 NECTIN2Q92692 538 aa29.01■■■□□ 2.23
SLC35C1-202ENST00000442528 ZBTB1Q9Y2K1 713 aa29.01■■■□□ 2.23
SLC35C1-202ENST00000442528 A1BGP04217 495 aa29■■■□□ 2.23
SLC35C1-202ENST00000442528 AK7Q96M32 723 aa28.98■■■□□ 2.23
SLC35C1-202ENST00000442528 DBF4Q9UBU7 674 aaPredicted RBP28.98■■■□□ 2.23
SLC35C1-202ENST00000442528 NBPF26B4DH59 902 aa28.97■■■□□ 2.23
SLC35C1-202ENST00000442528 PDIA6Q15084 440 aa28.97■■■□□ 2.23
SLC35C1-202ENST00000442528 NBPF14Q5TI25 921 aa28.97■■■□□ 2.23
SLC35C1-202ENST00000442528 NBPF10Q6P3W6 841 aaKnown RBP28.97■■■□□ 2.23
SLC35C1-202ENST00000442528 NBPF15Q8N660 670 aa28.97■■■□□ 2.23
SLC35C1-202ENST00000442528 AKT1S1Q96B36 256 aa28.97■■■□□ 2.23
SLC35C1-202ENST00000442528 CHPF2Q9P2E5 772 aa28.97■■■□□ 2.23
SLC35C1-202ENST00000442528 TUBGCP6Q96RT7 1819 aa28.97■■■□□ 2.23
SLC35C1-202ENST00000442528 PIP4K2AP48426 406 aaPredicted RBP28.96■■■□□ 2.23
SLC35C1-202ENST00000442528 ZNF827Q17R98 1081 aa28.96■■■□□ 2.23
SLC35C1-202ENST00000442528 STK31Q9BXU1 1019 aa28.96■■■□□ 2.23
SLC35C1-202ENST00000442528 ANO8Q9HCE9 1232 aaPredicted RBP28.96■■■□□ 2.23
SLC35C1-202ENST00000442528 DDX21Q9NR30 783 aaKnown RBP eCLIP28.96■■■□□ 2.23
SLC35C1-202ENST00000442528 SOCS7O14512 581 aa28.95■■■□□ 2.22
SLC35C1-202ENST00000442528 GNPATO15228 680 aa28.95■■■□□ 2.22
SLC35C1-202ENST00000442528 CANXP27824 592 aaKnown RBP28.95■■■□□ 2.22
SLC35C1-202ENST00000442528 IL6STP40189 918 aaPredicted RBP28.95■■■□□ 2.22
SLC35C1-202ENST00000442528 RPS6KA4O75676 772 aa28.93■■■□□ 2.22
SLC35C1-202ENST00000442528 ALDH1L2Q3SY69 923 aa28.93■■■□□ 2.22
SLC35C1-202ENST00000442528 QSER1Q2KHR3 1735 aa28.93■■■□□ 2.22
SLC35C1-202ENST00000442528 PROSER3Q2NL68 480 aa28.93■■■□□ 2.22
SLC35C1-202ENST00000442528 LRP10Q7Z4F1 713 aa28.93■■■□□ 2.22
SLC35C1-202ENST00000442528 RTCBQ9Y3I0 505 aaKnown RBP28.93■■■□□ 2.22
SLC35C1-202ENST00000442528 TCERG1O14776 1098 aaKnown RBP28.92■■■□□ 2.22
SLC35C1-202ENST00000442528 ANXA1P04083 346 aa28.92■■■□□ 2.22
SLC35C1-202ENST00000442528 MYL6BP14649 208 aa28.92■■■□□ 2.22
SLC35C1-202ENST00000442528 EIF5P55010 431 aaKnown RBP28.92■■■□□ 2.22
SLC35C1-202ENST00000442528 SLC15A2Q16348 729 aa28.92■■■□□ 2.22
SLC35C1-202ENST00000442528 RARSP54136 660 aaKnown RBP28.91■■■□□ 2.22
SLC35C1-202ENST00000442528 SSH1Q8WYL5 1049 aa28.91■■■□□ 2.22
SLC35C1-202ENST00000442528 STK32BQ9NY57 414 aa28.91■■■□□ 2.22
SLC35C1-202ENST00000442528 SLC4A2P04920 1241 aa28.9■■■□□ 2.22
SLC35C1-202ENST00000442528 AMIGO3Q86WK7 504 aa28.9■■■□□ 2.22
SLC35C1-202ENST00000442528 HYPKQ9NX55 129 aa28.9■■■□□ 2.22
SLC35C1-202ENST00000442528 TFCP2L1Q9NZI6 479 aa28.9■■■□□ 2.22
SLC35C1-202ENST00000442528 COL15A1P39059 1388 aa28.9■■■□□ 2.22
SLC35C1-202ENST00000442528 C4AP0C0L4 1744 aa28.9■■■□□ 2.22
SLC35C1-202ENST00000442528 SSFA2P28290 1259 aa28.89■■■□□ 2.22
SLC35C1-202ENST00000442528 ZNF330Q9Y3S2 320 aaPredicted RBP28.89■■■□□ 2.22
SLC35C1-202ENST00000442528 ADRA2BP18089 450 aa28.88■■■□□ 2.21
SLC35C1-202ENST00000442528 NPM2Q86SE8 214 aaKnown RBP28.88■■■□□ 2.21
SLC35C1-202ENST00000442528 BCL2L13Q9BXK5 485 aa28.88■■■□□ 2.21
SLC35C1-202ENST00000442528 SMC4Q9NTJ3 1288 aa28.88■■■□□ 2.21
SLC35C1-202ENST00000442528 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.86■■■□□ 2.21
SLC35C1-202ENST00000442528 PHF14O94880 888 aa28.85■■■□□ 2.21
SLC35C1-202ENST00000442528 BRPF1P55201 1214 aaPredicted RBP28.85■■■□□ 2.21
SLC35C1-202ENST00000442528 MRPL50Q8N5N7 158 aaKnown RBP28.85■■■□□ 2.21
SLC35C1-202ENST00000442528 RCAN3Q9UKA8 241 aa28.85■■■□□ 2.21
SLC35C1-202ENST00000442528 PHAXQ9H814 394 aaKnown RBP28.85■■■□□ 2.21
SLC35C1-202ENST00000442528 TRAPPC3LQ5T215 181 aa28.84■■■□□ 2.21
SLC35C1-202ENST00000442528 SMIM5Q71RC9 77 aa28.84■■■□□ 2.21
SLC35C1-202ENST00000442528 FLAD1Q8NFF5 587 aa28.84■■■□□ 2.21
SLC35C1-202ENST00000442528 PNPLA7Q6ZV29 1317 aa28.84■■■□□ 2.21
SLC35C1-202ENST00000442528 COPS6Q7L5N1 327 aa28.83■■■□□ 2.21
SLC35C1-202ENST00000442528 ARHGEF1Q92888 912 aaKnown RBP28.83■■■□□ 2.21
SLC35C1-202ENST00000442528 A0A087WZG4 1122 aa28.82■■■□□ 2.2
SLC35C1-202ENST00000442528 BCAR3O75815 825 aa28.82■■■□□ 2.2
SLC35C1-202ENST00000442528 FLIIQ13045 1269 aa28.82■■■□□ 2.2
SLC35C1-202ENST00000442528 G2E3Q7L622 706 aa28.82■■■□□ 2.2
SLC35C1-202ENST00000442528 XAGE3Q8WTP9 111 aa28.82■■■□□ 2.2
SLC35C1-202ENST00000442528 BCORQ6W2J9 1755 aa28.82■■■□□ 2.2
SLC35C1-202ENST00000442528 DZIP3Q86Y13 1208 aaKnown RBP28.81■■■□□ 2.2
SLC35C1-202ENST00000442528 SCN7AQ01118 1682 aa28.81■■■□□ 2.2
SLC35C1-202ENST00000442528 AIMP1Q12904 312 aaKnown RBP28.8■■■□□ 2.2
SLC35C1-202ENST00000442528 TTLL7Q6ZT98 887 aa28.8■■■□□ 2.2
SLC35C1-202ENST00000442528 KIF16BQ96L93 1317 aa28.8■■■□□ 2.2
SLC35C1-202ENST00000442528 RFC4P35249 363 aa28.79■■■□□ 2.2
SLC35C1-202ENST00000442528 TBC1D2BQ9UPU7 963 aa28.79■■■□□ 2.2
SLC35C1-202ENST00000442528 COL23A1Q86Y22 540 aaPredicted RBP28.78■■■□□ 2.2
SLC35C1-202ENST00000442528 ARXQ96QS3 562 aa28.78■■■□□ 2.2
SLC35C1-202ENST00000442528 ARFGEF2Q9Y6D5 1785 aa28.78■■■□□ 2.2
SLC35C1-202ENST00000442528 KIF6Q6ZMV9 814 aa28.78■■■□□ 2.2
SLC35C1-202ENST00000442528 NARFQ9UHQ1 456 aa28.78■■■□□ 2.2
SLC35C1-202ENST00000442528 NUP98P52948 1817 aa28.77■■■□□ 2.2
SLC35C1-202ENST00000442528 FKBP5Q13451 457 aaPredicted RBP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms