RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 CCDC146Q8IYE0 955 aa18.16■□□□□ 0.5
LTBR-202ENST00000440421 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
LTBR-202ENST00000440421 THUMPD2Q9BTF0 503 aaKnown RBP18.16■□□□□ 0.5
LTBR-202ENST00000440421 USP42Q9H9J4 1324 aaKnown RBP18.16■□□□□ 0.5
LTBR-202ENST00000440421 TAF7Q15545 349 aaPredicted RBP18.15■□□□□ 0.5
LTBR-202ENST00000440421 TEX13AQ9BXU3 409 aaPredicted RBP18.15■□□□□ 0.5
LTBR-202ENST00000440421 MIS18AQ9NYP9 233 aa18.15■□□□□ 0.5
LTBR-202ENST00000440421 CD2APQ9Y5K6 639 aa18.15■□□□□ 0.5
LTBR-202ENST00000440421 COL15A1P39059 1388 aa18.14■□□□□ 0.49
LTBR-202ENST00000440421 ZPR1O75312 459 aa18.13■□□□□ 0.49
LTBR-202ENST00000440421 RIPK4P57078 832 aa18.13■□□□□ 0.49
LTBR-202ENST00000440421 FKBP8Q14318 412 aa18.13■□□□□ 0.49
LTBR-202ENST00000440421 GPR162Q16538 588 aa18.13■□□□□ 0.49
LTBR-202ENST00000440421 USPL1Q5W0Q7 1092 aa18.13■□□□□ 0.49
LTBR-202ENST00000440421 ADAMTS8Q9UP79 889 aa18.13■□□□□ 0.49
LTBR-202ENST00000440421 RRP7AQ9Y3A4 280 aaKnown RBP18.13■□□□□ 0.49
LTBR-202ENST00000440421 PRAMEF22A3QJZ6 481 aa18.12■□□□□ 0.49
LTBR-202ENST00000440421 TMPOP42166 694 aaKnown RBP18.12■□□□□ 0.49
LTBR-202ENST00000440421 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
LTBR-202ENST00000440421 A1BGP04217 495 aa18.11■□□□□ 0.49
LTBR-202ENST00000440421 NEUROD2Q15784 382 aa18.11■□□□□ 0.49
LTBR-202ENST00000440421 USP16Q9Y5T5 823 aa18.11■□□□□ 0.49
LTBR-202ENST00000440421 PARP3Q9Y6F1 533 aa18.11■□□□□ 0.49
LTBR-202ENST00000440421 SNRPA1P09661 255 aaKnown RBP18.1■□□□□ 0.49
LTBR-202ENST00000440421 PNISRQ8TF01 805 aaKnown RBP18.1■□□□□ 0.49
LTBR-202ENST00000440421 RUNDC1Q96C34 613 aa18.1■□□□□ 0.49
LTBR-202ENST00000440421 NARFQ9UHQ1 456 aa18.1■□□□□ 0.49
LTBR-202ENST00000440421 PIP4K2AP48426 406 aaPredicted RBP18.09■□□□□ 0.49
LTBR-202ENST00000440421 EIF5P55010 431 aaKnown RBP18.09■□□□□ 0.49
LTBR-202ENST00000440421 WWC3Q9ULE0 1092 aa18.09■□□□□ 0.49
LTBR-202ENST00000440421 YY1P25490 414 aa18.08■□□□□ 0.48
LTBR-202ENST00000440421 DDR1Q08345 913 aa18.08■□□□□ 0.48
LTBR-202ENST00000440421 KDM3BQ7LBC6 1761 aa18.08■□□□□ 0.48
LTBR-202ENST00000440421 A0A087WZG4 1122 aa18.07■□□□□ 0.48
LTBR-202ENST00000440421 YBX3P16989 372 aaKnown RBP eCLIP18.07■□□□□ 0.48
LTBR-202ENST00000440421 IL6STP40189 918 aaPredicted RBP18.07■□□□□ 0.48
LTBR-202ENST00000440421 LMOD3Q0VAK6 560 aa18.07■□□□□ 0.48
LTBR-202ENST00000440421 CCDC184Q52MB2 194 aa18.07■□□□□ 0.48
LTBR-202ENST00000440421 TBC1D2BQ9UPU7 963 aa18.07■□□□□ 0.48
LTBR-202ENST00000440421 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
LTBR-202ENST00000440421 BCL2L12Q9HB09 334 aa18.06■□□□□ 0.48
LTBR-202ENST00000440421 C10orf71Q711Q0 1435 aa18.06■□□□□ 0.48
LTBR-202ENST00000440421 ANP32CO43423 234 aa18.05■□□□□ 0.48
LTBR-202ENST00000440421 TM4SF1P30408 202 aa18.05■□□□□ 0.48
LTBR-202ENST00000440421 EIF4A1P60842 406 aaKnown RBP18.05■□□□□ 0.48
LTBR-202ENST00000440421 NFIXQ14938 502 aa18.05■□□□□ 0.48
LTBR-202ENST00000440421 TSPYL4Q9UJ04 414 aa18.05■□□□□ 0.48
LTBR-202ENST00000440421 POLRMTO00411 1230 aaKnown RBP18.04■□□□□ 0.48
LTBR-202ENST00000440421 BICDL1Q6ZP65 573 aa18.04■□□□□ 0.48
LTBR-202ENST00000440421 KIF13BQ9NQT8 1826 aa18.04■□□□□ 0.48
LTBR-202ENST00000440421 PXDNLA1KZ92 1463 aa18.03■□□□□ 0.48
LTBR-202ENST00000440421 A0A0G2JLW4 131 aa18.03■□□□□ 0.48
LTBR-202ENST00000440421 TRIM35Q9UPQ4 493 aa18.03■□□□□ 0.48
LTBR-202ENST00000440421 LAMB4A4D0S4 1761 aa18.03■□□□□ 0.48
LTBR-202ENST00000440421 N4BP2Q86UW6 1770 aaPredicted RBP18.03■□□□□ 0.48
LTBR-202ENST00000440421 NBPF26B4DH59 902 aa18.02■□□□□ 0.48
LTBR-202ENST00000440421 GIGYF1O75420 1035 aaPredicted RBP18.02■□□□□ 0.48
LTBR-202ENST00000440421 NBPF10Q6P3W6 841 aaKnown RBP18.02■□□□□ 0.48
LTBR-202ENST00000440421 DZIP3Q86Y13 1208 aaKnown RBP18.02■□□□□ 0.48
LTBR-202ENST00000440421 NBPF15Q8N660 670 aa18.02■□□□□ 0.48
LTBR-202ENST00000440421 SCN7AQ01118 1682 aa18.02■□□□□ 0.47
LTBR-202ENST00000440421 KIAA1551Q9HCM1 1747 aa18.01■□□□□ 0.47
LTBR-202ENST00000440421 GRIN3BO60391 1043 aa18.01■□□□□ 0.47
LTBR-202ENST00000440421 TGFB2P61812 414 aa18.01■□□□□ 0.47
LTBR-202ENST00000440421 TBC1D9BQ66K14 1250 aa18.01■□□□□ 0.47
LTBR-202ENST00000440421 LAS1LQ9Y4W2 734 aaKnown RBP18.01■□□□□ 0.47
LTBR-202ENST00000440421 APAF1O14727 1248 aa18■□□□□ 0.47
LTBR-202ENST00000440421 CAMTA2O94983 1202 aa18■□□□□ 0.47
LTBR-202ENST00000440421 SERPINB2P05120 415 aa18■□□□□ 0.47
LTBR-202ENST00000440421 DPEP1P16444 411 aa18■□□□□ 0.47
LTBR-202ENST00000440421 CHD4Q14839 1912 aa18■□□□□ 0.47
LTBR-202ENST00000440421 NGEFQ8N5V2 710 aa17.99■□□□□ 0.47
LTBR-202ENST00000440421 MRS2Q9HD23 443 aa17.99■□□□□ 0.47
LTBR-202ENST00000440421 AFDNP55196 1824 aaKnown RBP17.99■□□□□ 0.47
LTBR-202ENST00000440421 BABAM1Q9NWV8 329 aa17.98■□□□□ 0.47
LTBR-202ENST00000440421 BCORQ6W2J9 1755 aa17.98■□□□□ 0.47
LTBR-202ENST00000440421 SENP3-EIF4A1A0A087X0R7 540 aa17.97■□□□□ 0.47
LTBR-202ENST00000440421 CHRNA5P30532 468 aa17.97■□□□□ 0.47
LTBR-202ENST00000440421 BCS1LQ9Y276 419 aa17.97■□□□□ 0.47
LTBR-202ENST00000440421 NRXN2Q9P2S2 1712 aa17.96■□□□□ 0.47
LTBR-202ENST00000440421 CHL1O00533 1208 aa17.96■□□□□ 0.47
LTBR-202ENST00000440421 MYL6BP14649 208 aa17.96■□□□□ 0.47
LTBR-202ENST00000440421 EIF2S2P20042 333 aaKnown RBP17.96■□□□□ 0.47
LTBR-202ENST00000440421 KCNA3P22001 575 aa17.95■□□□□ 0.46
LTBR-202ENST00000440421 SETDB2Q96T68 719 aa17.95■□□□□ 0.46
LTBR-202ENST00000440421 CARMIL3Q8ND23 1372 aa17.94■□□□□ 0.46
LTBR-202ENST00000440421 KRT24Q2M2I5 525 aa17.94■□□□□ 0.46
LTBR-202ENST00000440421 CCDC24Q8N4L8 307 aa17.94■□□□□ 0.46
LTBR-202ENST00000440421 NECTIN2Q92692 538 aa17.94■□□□□ 0.46
LTBR-202ENST00000440421 ZNF652Q9Y2D9 606 aa17.94■□□□□ 0.46
LTBR-202ENST00000440421 NPHP1O15259 732 aa17.93■□□□□ 0.46
LTBR-202ENST00000440421 PIM2Q9P1W9 311 aa17.93■□□□□ 0.46
LTBR-202ENST00000440421 BRCA1P38398 1863 aaKnown RBP17.92■□□□□ 0.46
LTBR-202ENST00000440421 HLFQ16534 295 aa17.92■□□□□ 0.46
LTBR-202ENST00000440421 PRR5LQ6MZQ0 368 aa17.92■□□□□ 0.46
LTBR-202ENST00000440421 CLEC4GQ6UXB4 293 aa17.92■□□□□ 0.46
LTBR-202ENST00000440421 TTLL7Q6ZT98 887 aa17.92■□□□□ 0.46
LTBR-202ENST00000440421 CFAP44Q96MT7 982 aa17.92■□□□□ 0.46
LTBR-202ENST00000440421 KIF6Q6ZMV9 814 aa17.91■□□□□ 0.46
LTBR-202ENST00000440421 ERBB4Q15303 1308 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms