RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 ITGB4P16144 1822 aa16.46■□□□□ 0.23
ACTN4-204ENST00000440400 PDIA6Q15084 440 aa16.46■□□□□ 0.22
ACTN4-204ENST00000440400 DBF4Q9UBU7 674 aaPredicted RBP16.46■□□□□ 0.22
ACTN4-204ENST00000440400 ZNF790Q6PG37 636 aa16.45■□□□□ 0.22
ACTN4-204ENST00000440400 PRDM11Q9NQV5 511 aa16.45■□□□□ 0.22
ACTN4-204ENST00000440400 F6X3S4 739 aa16.45■□□□□ 0.22
ACTN4-204ENST00000440400 GNAI3P08754 354 aa16.45■□□□□ 0.22
ACTN4-204ENST00000440400 BMP2KLQ5H9B9 411 aa16.45■□□□□ 0.22
ACTN4-204ENST00000440400 LRP10Q7Z4F1 713 aa16.45■□□□□ 0.22
ACTN4-204ENST00000440400 CHPF2Q9P2E5 772 aa16.45■□□□□ 0.22
ACTN4-204ENST00000440400 BEND3Q5T5X7 828 aa16.44■□□□□ 0.22
ACTN4-204ENST00000440400 UTYO14607 1347 aa16.44■□□□□ 0.22
ACTN4-204ENST00000440400 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.44■□□□□ 0.22
ACTN4-204ENST00000440400 FAM43AQ8N2R8 423 aa16.44■□□□□ 0.22
ACTN4-204ENST00000440400 PHAXQ9H814 394 aaKnown RBP16.44■□□□□ 0.22
ACTN4-204ENST00000440400 ERVV-2B6SEH9 535 aa16.43■□□□□ 0.22
ACTN4-204ENST00000440400 FKBP5Q13451 457 aaPredicted RBP16.43■□□□□ 0.22
ACTN4-204ENST00000440400 GNAI2P04899 355 aa16.43■□□□□ 0.22
ACTN4-204ENST00000440400 CSB-PGBD3P0DP91 1061 aa16.42■□□□□ 0.22
ACTN4-204ENST00000440400 USP44Q9H0E7 712 aa16.42■□□□□ 0.22
ACTN4-204ENST00000440400 HYPKQ9NX55 129 aa16.42■□□□□ 0.22
ACTN4-204ENST00000440400 COL15A1P39059 1388 aa16.42■□□□□ 0.22
ACTN4-204ENST00000440400 TJP1Q07157 1748 aa16.42■□□□□ 0.22
ACTN4-204ENST00000440400 DDRGK1Q96HY6 314 aa16.42■□□□□ 0.22
ACTN4-204ENST00000440400 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
ACTN4-204ENST00000440400 ATP8B2P98198 1209 aa16.41■□□□□ 0.22
ACTN4-204ENST00000440400 RREB1Q92766 1687 aa16.41■□□□□ 0.22
ACTN4-204ENST00000440400 SALL3Q9BXA9 1300 aa16.41■□□□□ 0.22
ACTN4-204ENST00000440400 AFDNP55196 1824 aaKnown RBP16.41■□□□□ 0.22
ACTN4-204ENST00000440400 IL2RBP14784 551 aa16.41■□□□□ 0.22
ACTN4-204ENST00000440400 ZCRB1Q8TBF4 217 aaKnown RBP16.41■□□□□ 0.22
ACTN4-204ENST00000440400 ERBB4Q15303 1308 aa16.41■□□□□ 0.22
ACTN4-204ENST00000440400 ALDH1L1O75891 902 aa16.4■□□□□ 0.22
ACTN4-204ENST00000440400 POLA2Q14181 598 aa16.4■□□□□ 0.22
ACTN4-204ENST00000440400 SEC24BO95487 1268 aa16.4■□□□□ 0.22
ACTN4-204ENST00000440400 HMMRO75330 724 aa16.4■□□□□ 0.22
ACTN4-204ENST00000440400 DNAAF4Q8WXU2 420 aa16.4■□□□□ 0.22
ACTN4-204ENST00000440400 ZNF831Q5JPB2 1677 aa16.39■□□□□ 0.21
ACTN4-204ENST00000440400 MTX1Q13505 466 aa16.39■□□□□ 0.21
ACTN4-204ENST00000440400 OSBPL3Q9H4L5 887 aa16.39■□□□□ 0.21
ACTN4-204ENST00000440400 ANKRD45Q5TZF3 282 aa16.39■□□□□ 0.21
ACTN4-204ENST00000440400 KSR2Q6VAB6 950 aa16.39■□□□□ 0.21
ACTN4-204ENST00000440400 NFATC2IPQ8NCF5 419 aa16.39■□□□□ 0.21
ACTN4-204ENST00000440400 TBC1D32Q96NH3 1257 aa16.39■□□□□ 0.21
ACTN4-204ENST00000440400 LNPKQ9C0E8 428 aa16.39■□□□□ 0.21
ACTN4-204ENST00000440400 PLEKHM2Q8IWE5 1019 aa16.38■□□□□ 0.21
ACTN4-204ENST00000440400 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
ACTN4-204ENST00000440400 SSH3Q8TE77 659 aa16.38■□□□□ 0.21
ACTN4-204ENST00000440400 SRCIN1Q9C0H9 1055 aa16.38■□□□□ 0.21
ACTN4-204ENST00000440400 RRAGDQ9NQL2 400 aaPredicted RBP16.38■□□□□ 0.21
ACTN4-204ENST00000440400 PROSER3Q2NL68 480 aa16.38■□□□□ 0.21
ACTN4-204ENST00000440400 TOM1L2Q6ZVM7 507 aa16.38■□□□□ 0.21
ACTN4-204ENST00000440400 PRAMEF22A3QJZ6 481 aa16.37■□□□□ 0.21
ACTN4-204ENST00000440400 SLC4A10Q6U841 1118 aa16.37■□□□□ 0.21
ACTN4-204ENST00000440400 NECTIN2Q92692 538 aa16.37■□□□□ 0.21
ACTN4-204ENST00000440400 NAP1L5Q96NT1 182 aaPredicted RBP16.37■□□□□ 0.21
ACTN4-204ENST00000440400 ARXQ96QS3 562 aa16.37■□□□□ 0.21
ACTN4-204ENST00000440400 DOT1LQ8TEK3 1739 aa16.37■□□□□ 0.21
ACTN4-204ENST00000440400 FRAT2O75474 233 aaPredicted RBP16.36■□□□□ 0.21
ACTN4-204ENST00000440400 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
ACTN4-204ENST00000440400 SLIT2O94813 1529 aa16.36■□□□□ 0.21
ACTN4-204ENST00000440400 ZNF496Q96IT1 587 aaPredicted RBP16.36■□□□□ 0.21
ACTN4-204ENST00000440400 FMNL2Q96PY5 1086 aa16.36■□□□□ 0.21
ACTN4-204ENST00000440400 EIF2S2P20042 333 aaKnown RBP16.36■□□□□ 0.21
ACTN4-204ENST00000440400 HSP90AA2PQ14568 343 aaPredicted RBP16.36■□□□□ 0.21
ACTN4-204ENST00000440400 KLHL34Q8N239 644 aa16.36■□□□□ 0.21
ACTN4-204ENST00000440400 A0A0U1RQG5 324 aaPredicted RBP16.35■□□□□ 0.21
ACTN4-204ENST00000440400 PI4KAP2A4QPH2 592 aa16.35■□□□□ 0.21
ACTN4-204ENST00000440400 PI4KAP1Q8N8J0 262 aa16.35■□□□□ 0.21
ACTN4-204ENST00000440400 TTC22Q5TAA0 569 aa16.34■□□□□ 0.21
ACTN4-204ENST00000440400 AOX1Q06278 1338 aa16.34■□□□□ 0.21
ACTN4-204ENST00000440400 GSPT1P15170 499 aaKnown RBP16.34■□□□□ 0.21
ACTN4-204ENST00000440400 CABP4P57796 275 aa16.34■□□□□ 0.21
ACTN4-204ENST00000440400 PNMA6EA0A0J9YXQ4 647 aa16.33■□□□□ 0.21
ACTN4-204ENST00000440400 UBTFL1P0CB47 393 aaPredicted RBP16.33■□□□□ 0.21
ACTN4-204ENST00000440400 SLC39A6Q13433 755 aa16.33■□□□□ 0.21
ACTN4-204ENST00000440400 LRRFIP2Q9Y608 721 aaKnown RBP16.33■□□□□ 0.21
ACTN4-204ENST00000440400 LINS1Q8NG48 757 aa16.32■□□□□ 0.2
ACTN4-204ENST00000440400 MAP3K2Q9Y2U5 619 aa16.32■□□□□ 0.2
ACTN4-204ENST00000440400 ANKRD36CQ5JPF3 1778 aa16.32■□□□□ 0.2
ACTN4-204ENST00000440400 STAP2Q9UGK3 403 aa16.32■□□□□ 0.2
ACTN4-204ENST00000440400 DDX58O95786 925 aaKnown RBP16.32■□□□□ 0.2
ACTN4-204ENST00000440400 RBM25P49756 843 aaKnown RBP16.32■□□□□ 0.2
ACTN4-204ENST00000440400 RAB11FIP3O75154 756 aa16.31■□□□□ 0.2
ACTN4-204ENST00000440400 USP42Q9H9J4 1324 aaKnown RBP16.31■□□□□ 0.2
ACTN4-204ENST00000440400 BCL9O00512 1426 aa16.31■□□□□ 0.2
ACTN4-204ENST00000440400 BTG4Q9NY30 223 aa16.3■□□□□ 0.2
ACTN4-204ENST00000440400 THRAP3Q9Y2W1 955 aaKnown RBP16.3■□□□□ 0.2
ACTN4-204ENST00000440400 TTC5Q8N0Z6 440 aa16.3■□□□□ 0.2
ACTN4-204ENST00000440400 NBPF7P0C2Y1 421 aaPredicted RBP16.3■□□□□ 0.2
ACTN4-204ENST00000440400 HDAC5Q9UQL6 1122 aa16.3■□□□□ 0.2
ACTN4-204ENST00000440400 METTL22Q9BUU2 404 aaPredicted RBP16.29■□□□□ 0.2
ACTN4-204ENST00000440400 ANXA1P04083 346 aa16.29■□□□□ 0.2
ACTN4-204ENST00000440400 IGKV5-2P06315 115 aa16.29■□□□□ 0.2
ACTN4-204ENST00000440400 EVA1CP58658 441 aa16.28■□□□□ 0.2
ACTN4-204ENST00000440400 USP16Q9Y5T5 823 aa16.28■□□□□ 0.2
ACTN4-204ENST00000440400 CDCA7Q9BWT1 371 aaPredicted RBP16.28■□□□□ 0.2
ACTN4-204ENST00000440400 LRRCC1Q9C099 1032 aa16.28■□□□□ 0.2
ACTN4-204ENST00000440400 THSD7AQ9UPZ6 1657 aa16.27■□□□□ 0.2
ACTN4-204ENST00000440400 KAZALD1Q96I82 304 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 893.9 ms