RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 KCNQ3O43525 872 aa15.97■□□□□ 0.15
PDGFB-203ENST00000440375 DPEP1P16444 411 aa15.97■□□□□ 0.15
PDGFB-203ENST00000440375 ADCY9O60503 1353 aa15.97■□□□□ 0.15
PDGFB-203ENST00000440375 ATP10DQ9P241 1426 aa15.96■□□□□ 0.15
PDGFB-203ENST00000440375 POLRMTO00411 1230 aaKnown RBP15.96■□□□□ 0.15
PDGFB-203ENST00000440375 CANXP27824 592 aaKnown RBP15.96■□□□□ 0.15
PDGFB-203ENST00000440375 MCM10Q7L590 875 aa15.96■□□□□ 0.15
PDGFB-203ENST00000440375 BCL2L12Q9HB09 334 aa15.96■□□□□ 0.15
PDGFB-203ENST00000440375 ZPR1O75312 459 aa15.95■□□□□ 0.14
PDGFB-203ENST00000440375 FCHSD2O94868 740 aa15.95■□□□□ 0.14
PDGFB-203ENST00000440375 TGFB2P61812 414 aa15.95■□□□□ 0.14
PDGFB-203ENST00000440375 DCTN1Q14203 1278 aa15.95■□□□□ 0.14
PDGFB-203ENST00000440375 KCNA3P22001 575 aa15.94■□□□□ 0.14
PDGFB-203ENST00000440375 TM4SF1P30408 202 aa15.94■□□□□ 0.14
PDGFB-203ENST00000440375 NARFQ9UHQ1 456 aa15.94■□□□□ 0.14
PDGFB-203ENST00000440375 BRCA1P38398 1863 aaKnown RBP15.94■□□□□ 0.14
PDGFB-203ENST00000440375 BTBD11A6QL63 1104 aa15.93■□□□□ 0.14
PDGFB-203ENST00000440375 NFIXQ14938 502 aa15.93■□□□□ 0.14
PDGFB-203ENST00000440375 BCS1LQ9Y276 419 aa15.93■□□□□ 0.14
PDGFB-203ENST00000440375 SCN7AQ01118 1682 aa15.92■□□□□ 0.14
PDGFB-203ENST00000440375 STARD3NLO95772 234 aa15.92■□□□□ 0.14
PDGFB-203ENST00000440375 EIF5P55010 431 aaKnown RBP15.92■□□□□ 0.14
PDGFB-203ENST00000440375 FMNL2Q96PY5 1086 aa15.92■□□□□ 0.14
PDGFB-203ENST00000440375 NRXN2Q9P2S2 1712 aa15.91■□□□□ 0.14
PDGFB-203ENST00000440375 PRAMEF22A3QJZ6 481 aa15.91■□□□□ 0.14
PDGFB-203ENST00000440375 CHRNA5P30532 468 aa15.91■□□□□ 0.14
PDGFB-203ENST00000440375 ZNF330Q9Y3S2 320 aaPredicted RBP15.91■□□□□ 0.14
PDGFB-203ENST00000440375 CARMIL3Q8ND23 1372 aa15.9■□□□□ 0.14
PDGFB-203ENST00000440375 AFDNP55196 1824 aaKnown RBP15.9■□□□□ 0.14
PDGFB-203ENST00000440375 GIGYF1O75420 1035 aaPredicted RBP15.9■□□□□ 0.14
PDGFB-203ENST00000440375 A1BGP04217 495 aa15.9■□□□□ 0.14
PDGFB-203ENST00000440375 C1QTNF8P60827 252 aa15.9■□□□□ 0.14
PDGFB-203ENST00000440375 RTF1Q92541 710 aaKnown RBP15.9■□□□□ 0.14
PDGFB-203ENST00000440375 PIP4K2AP48426 406 aaPredicted RBP15.89■□□□□ 0.13
PDGFB-203ENST00000440375 ZNF526Q8TF50 670 aaPredicted RBP15.89■□□□□ 0.13
PDGFB-203ENST00000440375 PLEKHF1Q96S99 279 aa15.89■□□□□ 0.13
PDGFB-203ENST00000440375 BICDL1Q6ZP65 573 aa15.88■□□□□ 0.13
PDGFB-203ENST00000440375 TEX13AQ9BXU3 409 aaPredicted RBP15.88■□□□□ 0.13
PDGFB-203ENST00000440375 TBC1D2BQ9UPU7 963 aa15.88■□□□□ 0.13
PDGFB-203ENST00000440375 USP16Q9Y5T5 823 aa15.88■□□□□ 0.13
PDGFB-203ENST00000440375 SERPINB2P05120 415 aa15.87■□□□□ 0.13
PDGFB-203ENST00000440375 IL6STP40189 918 aaPredicted RBP15.87■□□□□ 0.13
PDGFB-203ENST00000440375 DDX10Q13206 875 aaKnown RBP15.87■□□□□ 0.13
PDGFB-203ENST00000440375 TBC1D9BQ66K14 1250 aa15.87■□□□□ 0.13
PDGFB-203ENST00000440375 MIS18AQ9NYP9 233 aa15.87■□□□□ 0.13
PDGFB-203ENST00000440375 DLG5Q8TDM6 1919 aa15.87■□□□□ 0.13
PDGFB-203ENST00000440375 ARFGEF1Q9Y6D6 1849 aa15.87■□□□□ 0.13
PDGFB-203ENST00000440375 BCORQ6W2J9 1755 aa15.86■□□□□ 0.13
PDGFB-203ENST00000440375 A0A087WZG4 1122 aa15.86■□□□□ 0.13
PDGFB-203ENST00000440375 HTATSF1O43719 755 aaKnown RBP15.86■□□□□ 0.13
PDGFB-203ENST00000440375 ARHGAP27Q6ZUM4 889 aa15.86■□□□□ 0.13
PDGFB-203ENST00000440375 THUMPD2Q9BTF0 503 aaKnown RBP15.86■□□□□ 0.13
PDGFB-203ENST00000440375 PIM2Q9P1W9 311 aa15.86■□□□□ 0.13
PDGFB-203ENST00000440375 CAMTA2O94983 1202 aa15.85■□□□□ 0.13
PDGFB-203ENST00000440375 NFE2L2Q16236 605 aa15.85■□□□□ 0.13
PDGFB-203ENST00000440375 DALRD3Q5D0E6 543 aaKnown RBP15.85■□□□□ 0.13
PDGFB-203ENST00000440375 GPBP1L1Q9HC44 474 aaPredicted RBP15.85■□□□□ 0.13
PDGFB-203ENST00000440375 SNRPA1P09661 255 aaKnown RBP15.84■□□□□ 0.13
PDGFB-203ENST00000440375 RALBP1Q15311 655 aa15.84■□□□□ 0.13
PDGFB-203ENST00000440375 CCDC24Q8N4L8 307 aa15.84■□□□□ 0.13
PDGFB-203ENST00000440375 KDM3BQ7LBC6 1761 aa15.84■□□□□ 0.13
PDGFB-203ENST00000440375 DLEC1Q9Y238 1755 aa15.84■□□□□ 0.13
PDGFB-203ENST00000440375 CEP350Q5VT06 3117 aa15.83■□□□□ 0.13
PDGFB-203ENST00000440375 ANKRD31Q8N7Z5 1873 aa15.83■□□□□ 0.12
PDGFB-203ENST00000440375 SENP3-EIF4A1A0A087X0R7 540 aa15.83■□□□□ 0.12
PDGFB-203ENST00000440375 NBPF26B4DH59 902 aa15.83■□□□□ 0.12
PDGFB-203ENST00000440375 TAF7Q15545 349 aaPredicted RBP15.83■□□□□ 0.12
PDGFB-203ENST00000440375 NBPF10Q6P3W6 841 aaKnown RBP15.83■□□□□ 0.12
PDGFB-203ENST00000440375 NBPF15Q8N660 670 aa15.83■□□□□ 0.12
PDGFB-203ENST00000440375 COL11A2P13942 1736 aaPredicted RBP15.82■□□□□ 0.12
PDGFB-203ENST00000440375 LAMB4A4D0S4 1761 aa15.82■□□□□ 0.12
PDGFB-203ENST00000440375 NEFMP07197 916 aa15.82■□□□□ 0.12
PDGFB-203ENST00000440375 DZIP3Q86Y13 1208 aaKnown RBP15.82■□□□□ 0.12
PDGFB-203ENST00000440375 PRR5LQ6MZQ0 368 aa15.81■□□□□ 0.12
PDGFB-203ENST00000440375 C2CD5Q86YS7 1000 aa15.81■□□□□ 0.12
PDGFB-203ENST00000440375 MAPK8IP3Q9UPT6 1336 aa15.81■□□□□ 0.12
PDGFB-203ENST00000440375 MYBBP1AQ9BQG0 1328 aaKnown RBP15.8■□□□□ 0.12
PDGFB-203ENST00000440375 RASSF7Q02833 373 aa15.8■□□□□ 0.12
PDGFB-203ENST00000440375 C9orf131Q5VYM1 1079 aa15.8■□□□□ 0.12
PDGFB-203ENST00000440375 KIF3CO14782 793 aa15.79■□□□□ 0.12
PDGFB-203ENST00000440375 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
PDGFB-203ENST00000440375 EIF4A1P60842 406 aaKnown RBP15.78■□□□□ 0.12
PDGFB-203ENST00000440375 SETDB2Q96T68 719 aa15.78■□□□□ 0.12
PDGFB-203ENST00000440375 H0YIN7 160 aa15.77■□□□□ 0.12
PDGFB-203ENST00000440375 PRELPP51888 382 aa15.77■□□□□ 0.12
PDGFB-203ENST00000440375 CCDC146Q8IYE0 955 aa15.77■□□□□ 0.12
PDGFB-203ENST00000440375 TTLL6Q8N841 843 aa15.77■□□□□ 0.12
PDGFB-203ENST00000440375 CNBD1Q8NA66 436 aa15.77■□□□□ 0.12
PDGFB-203ENST00000440375 PNISRQ8TF01 805 aaKnown RBP15.77■□□□□ 0.12
PDGFB-203ENST00000440375 RNF181Q9P0P0 153 aa15.77■□□□□ 0.12
PDGFB-203ENST00000440375 BRIP1Q9BX63 1249 aa15.76■□□□□ 0.11
PDGFB-203ENST00000440375 PNNQ9H307 717 aaKnown RBP15.76■□□□□ 0.11
PDGFB-203ENST00000440375 NMRK2Q9NPI5 230 aa15.76■□□□□ 0.11
PDGFB-203ENST00000440375 RRP7AQ9Y3A4 280 aaKnown RBP15.76■□□□□ 0.11
PDGFB-203ENST00000440375 TMPOP42166 694 aaKnown RBP15.75■□□□□ 0.11
PDGFB-203ENST00000440375 RIPK4P57078 832 aa15.75■□□□□ 0.11
PDGFB-203ENST00000440375 HLFQ16534 295 aa15.75■□□□□ 0.11
PDGFB-203ENST00000440375 SBF1O95248 1867 aa15.74■□□□□ 0.11
PDGFB-203ENST00000440375 NFKBIEO00221 500 aa15.74■□□□□ 0.11
PDGFB-203ENST00000440375 PDE6BP35913 854 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms