RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 ROBO1Q9Y6N7 1651 aa18.76■□□□□ 0.59
CPSF7-205ENST00000439958 ANKRD44Q8N8A2 993 aa18.75■□□□□ 0.59
CPSF7-205ENST00000439958 ATP5J2-PTCD1G3V325 749 aa18.75■□□□□ 0.59
CPSF7-205ENST00000439958 NUCB1Q02818 461 aa18.75■□□□□ 0.59
CPSF7-205ENST00000439958 UPF2Q9HAU5 1272 aaKnown RBP18.75■□□□□ 0.59
CPSF7-205ENST00000439958 HYPKQ9NX55 129 aa18.75■□□□□ 0.59
CPSF7-205ENST00000439958 RPAP2Q8IXW5 612 aaPredicted RBP18.74■□□□□ 0.59
CPSF7-205ENST00000439958 SEC24BO95487 1268 aa18.74■□□□□ 0.59
CPSF7-205ENST00000439958 A1BGP04217 495 aa18.74■□□□□ 0.59
CPSF7-205ENST00000439958 HOXB7P09629 217 aa18.74■□□□□ 0.59
CPSF7-205ENST00000439958 SLC4A3P48751 1232 aa18.74■□□□□ 0.59
CPSF7-205ENST00000439958 USP44Q9H0E7 712 aa18.74■□□□□ 0.59
CPSF7-205ENST00000439958 PNMA6EA0A0J9YXQ4 647 aa18.74■□□□□ 0.59
CPSF7-205ENST00000439958 NEXNQ0ZGT2 675 aa18.74■□□□□ 0.59
CPSF7-205ENST00000439958 MEX3CQ5U5Q3 659 aaKnown RBP18.74■□□□□ 0.59
CPSF7-205ENST00000439958 MYD88Q99836 296 aa18.74■□□□□ 0.59
CPSF7-205ENST00000439958 DDX21Q9NR30 783 aaKnown RBP eCLIP18.74■□□□□ 0.59
CPSF7-205ENST00000439958 ASAP1Q9ULH1 1129 aa18.74■□□□□ 0.59
CPSF7-205ENST00000439958 SRGAP3O43295 1099 aa18.73■□□□□ 0.59
CPSF7-205ENST00000439958 TSHZ3Q63HK5 1081 aa18.73■□□□□ 0.59
CPSF7-205ENST00000439958 OTUD7AQ8TE49 926 aaPredicted RBP18.73■□□□□ 0.59
CPSF7-205ENST00000439958 OVOS2A0A0G2JMS6 1433 aa18.73■□□□□ 0.59
CPSF7-205ENST00000439958 IL1RAPL2Q9NP60 686 aa18.72■□□□□ 0.59
CPSF7-205ENST00000439958 ZBTB3Q9H5J0 574 aa18.72■□□□□ 0.59
CPSF7-205ENST00000439958 SURF6O75683 361 aaKnown RBP18.71■□□□□ 0.59
CPSF7-205ENST00000439958 DDB1Q16531 1140 aa18.71■□□□□ 0.59
CPSF7-205ENST00000439958 KSR2Q6VAB6 950 aa18.71■□□□□ 0.59
CPSF7-205ENST00000439958 FAM98CQ17RN3 349 aaKnown RBP18.71■□□□□ 0.59
CPSF7-205ENST00000439958 CHMP3Q9Y3E7 222 aa18.71■□□□□ 0.59
CPSF7-205ENST00000439958 SOS1Q07889 1333 aaPredicted RBP18.71■□□□□ 0.59
CPSF7-205ENST00000439958 MSH5O43196 834 aa18.7■□□□□ 0.58
CPSF7-205ENST00000439958 PRIM1P49642 420 aaKnown RBP18.7■□□□□ 0.58
CPSF7-205ENST00000439958 PPP1R42Q7Z4L9 355 aa18.7■□□□□ 0.58
CPSF7-205ENST00000439958 ANKRD13DQ6ZTN6 518 aa18.69■□□□□ 0.58
CPSF7-205ENST00000439958 BEND3Q5T5X7 828 aa18.69■□□□□ 0.58
CPSF7-205ENST00000439958 PIGBQ92521 554 aa18.69■□□□□ 0.58
CPSF7-205ENST00000439958 DCTPP1Q9H773 170 aa18.69■□□□□ 0.58
CPSF7-205ENST00000439958 COL18A1P39060 1754 aa18.68■□□□□ 0.58
CPSF7-205ENST00000439958 ERVV-2B6SEH9 535 aa18.68■□□□□ 0.58
CPSF7-205ENST00000439958 FAM182BQ5T319 152 aa18.68■□□□□ 0.58
CPSF7-205ENST00000439958 IPO9Q96P70 1041 aaKnown RBP18.67■□□□□ 0.58
CPSF7-205ENST00000439958 SIL1Q9H173 461 aa18.67■□□□□ 0.58
CPSF7-205ENST00000439958 ADCY9O60503 1353 aa18.67■□□□□ 0.58
CPSF7-205ENST00000439958 DNAJC10Q8IXB1 793 aa18.66■□□□□ 0.58
CPSF7-205ENST00000439958 PDIA6Q15084 440 aa18.66■□□□□ 0.58
CPSF7-205ENST00000439958 LRRC37A3O60309 1634 aa18.66■□□□□ 0.58
CPSF7-205ENST00000439958 TTLL7Q6ZT98 887 aa18.65■□□□□ 0.58
CPSF7-205ENST00000439958 LMO7Q8WWI1 1683 aa18.65■□□□□ 0.58
CPSF7-205ENST00000439958 UBE3BQ7Z3V4 1068 aa18.65■□□□□ 0.58
CPSF7-205ENST00000439958 LTBP4Q8N2S1 1624 aa18.64■□□□□ 0.57
CPSF7-205ENST00000439958 PA2G4Q9UQ80 394 aaKnown RBP18.64■□□□□ 0.57
CPSF7-205ENST00000439958 LRRCC1Q9C099 1032 aa18.64■□□□□ 0.57
CPSF7-205ENST00000439958 NOP58Q9Y2X3 529 aaKnown RBP18.64■□□□□ 0.57
CPSF7-205ENST00000439958 ATP10DQ9P241 1426 aa18.64■□□□□ 0.57
CPSF7-205ENST00000439958 ATP8B2P98198 1209 aa18.63■□□□□ 0.57
CPSF7-205ENST00000439958 NUTM1Q86Y26 1132 aa18.63■□□□□ 0.57
CPSF7-205ENST00000439958 TRIM6-TRIM34B2RNG4 842 aa18.63■□□□□ 0.57
CPSF7-205ENST00000439958 LINS1Q8NG48 757 aa18.63■□□□□ 0.57
CPSF7-205ENST00000439958 FAM208AQ9UK61 1670 aaKnown RBP18.63■□□□□ 0.57
CPSF7-205ENST00000439958 GRM8O00222 908 aa18.63■□□□□ 0.57
CPSF7-205ENST00000439958 CCDC85AQ96PX6 553 aaPredicted RBP18.63■□□□□ 0.57
CPSF7-205ENST00000439958 NHSL1Q5SYE7 1610 aa18.62■□□□□ 0.57
CPSF7-205ENST00000439958 HEG1Q9ULI3 1381 aa18.62■□□□□ 0.57
CPSF7-205ENST00000439958 FAM177BA6PVY3 158 aa18.62■□□□□ 0.57
CPSF7-205ENST00000439958 KLHDC4Q8TBB5 520 aa18.62■□□□□ 0.57
CPSF7-205ENST00000439958 A0A087WZG4 1122 aa18.62■□□□□ 0.57
CPSF7-205ENST00000439958 NBPF26B4DH59 902 aa18.62■□□□□ 0.57
CPSF7-205ENST00000439958 NBPF14Q5TI25 921 aa18.62■□□□□ 0.57
CPSF7-205ENST00000439958 NBPF10Q6P3W6 841 aaKnown RBP18.62■□□□□ 0.57
CPSF7-205ENST00000439958 NBPF15Q8N660 670 aa18.62■□□□□ 0.57
CPSF7-205ENST00000439958 RILPL2Q969X0 211 aa18.62■□□□□ 0.57
CPSF7-205ENST00000439958 MAP4K4O95819 1239 aaPredicted RBP18.61■□□□□ 0.57
CPSF7-205ENST00000439958 KCNQ4P56696 695 aa18.61■□□□□ 0.57
CPSF7-205ENST00000439958 IGKV5-2P06315 115 aa18.6■□□□□ 0.57
CPSF7-205ENST00000439958 PLEKHM2Q8IWE5 1019 aa18.6■□□□□ 0.57
CPSF7-205ENST00000439958 ATG3Q9NT62 314 aa18.6■□□□□ 0.57
CPSF7-205ENST00000439958 STARD3NLO95772 234 aa18.6■□□□□ 0.57
CPSF7-205ENST00000439958 GPTP24298 496 aa18.6■□□□□ 0.57
CPSF7-205ENST00000439958 SPRYD3Q8NCJ5 442 aa18.6■□□□□ 0.57
CPSF7-205ENST00000439958 SUCLG2Q96I99 432 aa18.6■□□□□ 0.57
CPSF7-205ENST00000439958 BICC1Q9H694 974 aaKnown RBP18.6■□□□□ 0.57
CPSF7-205ENST00000439958 SPATA31A1Q5TZJ5 1347 aa18.6■□□□□ 0.57
CPSF7-205ENST00000439958 USP21Q9UK80 565 aa18.6■□□□□ 0.57
CPSF7-205ENST00000439958 PHLPP1O60346 1717 aa18.59■□□□□ 0.57
CPSF7-205ENST00000439958 NBR1Q14596 966 aa18.59■□□□□ 0.57
CPSF7-205ENST00000439958 CERKQ8TCT0 537 aa18.59■□□□□ 0.57
CPSF7-205ENST00000439958 HSPA1LP34931 641 aa18.58■□□□□ 0.57
CPSF7-205ENST00000439958 NKX1-1Q15270 411 aaPredicted RBP18.58■□□□□ 0.57
CPSF7-205ENST00000439958 METTL22Q9BUU2 404 aaPredicted RBP18.58■□□□□ 0.57
CPSF7-205ENST00000439958 NEURL1BA8MQ27 555 aa18.58■□□□□ 0.57
CPSF7-205ENST00000439958 ALDH1L1O75891 902 aa18.58■□□□□ 0.57
CPSF7-205ENST00000439958 CRYBG1Q9Y4K1 1723 aa18.58■□□□□ 0.56
CPSF7-205ENST00000439958 KCNQ2O43526 872 aa18.58■□□□□ 0.56
CPSF7-205ENST00000439958 UNC5CLQ8IV45 518 aa18.57■□□□□ 0.56
CPSF7-205ENST00000439958 TBC1D2BQ9UPU7 963 aa18.57■□□□□ 0.56
CPSF7-205ENST00000439958 GCKRQ14397 625 aa18.57■□□□□ 0.56
CPSF7-205ENST00000439958 MARCH10Q8NA82 808 aaPredicted RBP18.57■□□□□ 0.56
CPSF7-205ENST00000439958 KIF6Q6ZMV9 814 aa18.56■□□□□ 0.56
CPSF7-205ENST00000439958 DDRGK1Q96HY6 314 aa18.56■□□□□ 0.56
CPSF7-205ENST00000439958 GSPT1P15170 499 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms