RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 PNPLA6Q8IY17 1366 aa18.8■□□□□ 0.6
DHFR-201ENST00000439211 NOL10Q9BSC4 688 aaKnown RBP18.8■□□□□ 0.6
DHFR-201ENST00000439211 HCLS1P14317 486 aaPredicted RBP18.8■□□□□ 0.6
DHFR-201ENST00000439211 CHL1O00533 1208 aa18.8■□□□□ 0.6
DHFR-201ENST00000439211 MTHFSDQ2M296 383 aaKnown RBP18.8■□□□□ 0.6
DHFR-201ENST00000439211 LRRFIP2Q9Y608 721 aaKnown RBP18.8■□□□□ 0.6
DHFR-201ENST00000439211 TERF2Q15554 542 aa18.79■□□□□ 0.6
DHFR-201ENST00000439211 HDGFL1Q5TGJ6 251 aa18.79■□□□□ 0.6
DHFR-201ENST00000439211 C10orf67Q8IYJ2 551 aa18.79■□□□□ 0.6
DHFR-201ENST00000439211 TNNT1P13805 278 aa18.79■□□□□ 0.6
DHFR-201ENST00000439211 FLIIQ13045 1269 aa18.79■□□□□ 0.6
DHFR-201ENST00000439211 TMX3Q96JJ7 454 aa18.79■□□□□ 0.6
DHFR-201ENST00000439211 EDC4Q6P2E9 1401 aaKnown RBP18.78■□□□□ 0.6
DHFR-201ENST00000439211 LRRC7Q96NW7 1537 aa18.78■□□□□ 0.6
DHFR-201ENST00000439211 CFAP74Q9C0B2 1584 aa18.78■□□□□ 0.6
DHFR-201ENST00000439211 USHBP1Q8N6Y0 703 aa18.77■□□□□ 0.6
DHFR-201ENST00000439211 TPM3P06753 285 aa18.77■□□□□ 0.6
DHFR-201ENST00000439211 CHMP3Q9Y3E7 222 aa18.77■□□□□ 0.59
DHFR-201ENST00000439211 POLR3GO15318 223 aaPredicted RBP18.76■□□□□ 0.59
DHFR-201ENST00000439211 GPS2Q13227 327 aa18.76■□□□□ 0.59
DHFR-201ENST00000439211 RASSF4Q9H2L5 321 aa18.76■□□□□ 0.59
DHFR-201ENST00000439211 CAMSAP1Q5T5Y3 1602 aa18.76■□□□□ 0.59
DHFR-201ENST00000439211 ABTB2Q8N961 1025 aa18.76■□□□□ 0.59
DHFR-201ENST00000439211 NEXMIFQ5QGS0 1516 aa18.76■□□□□ 0.59
DHFR-201ENST00000439211 METP08581 1390 aa18.75■□□□□ 0.59
DHFR-201ENST00000439211 SLFN14P0C7P3 912 aa18.75■□□□□ 0.59
DHFR-201ENST00000439211 CLGNO14967 610 aa18.75■□□□□ 0.59
DHFR-201ENST00000439211 SRGAP3O43295 1099 aa18.75■□□□□ 0.59
DHFR-201ENST00000439211 PTPRMP28827 1452 aa18.74■□□□□ 0.59
DHFR-201ENST00000439211 DDIT3P35638 169 aa18.74■□□□□ 0.59
DHFR-201ENST00000439211 MCM2P49736 904 aa18.74■□□□□ 0.59
DHFR-201ENST00000439211 TEFQ10587 303 aa18.74■□□□□ 0.59
DHFR-201ENST00000439211 NEURL4Q96JN8 1562 aa18.74■□□□□ 0.59
DHFR-201ENST00000439211 RTL1A6NKG5 1358 aa18.74■□□□□ 0.59
DHFR-201ENST00000439211 PPLO60437 1756 aa18.74■□□□□ 0.59
DHFR-201ENST00000439211 MYO3AQ8NEV4 1616 aa18.74■□□□□ 0.59
DHFR-201ENST00000439211 PTCH1Q13635 1447 aa18.74■□□□□ 0.59
DHFR-201ENST00000439211 NSFL1CQ9UNZ2 370 aaKnown RBP18.73■□□□□ 0.59
DHFR-201ENST00000439211 GNAT3A8MTJ3 354 aa18.73■□□□□ 0.59
DHFR-201ENST00000439211 CWC27Q6UX04 472 aaKnown RBP18.73■□□□□ 0.59
DHFR-201ENST00000439211 DDX54Q8TDD1 881 aaKnown RBP18.73■□□□□ 0.59
DHFR-201ENST00000439211 C9orf78Q9NZ63 289 aaPredicted RBP18.73■□□□□ 0.59
DHFR-201ENST00000439211 DTNBO60941 627 aa18.72■□□□□ 0.59
DHFR-201ENST00000439211 ESYT1Q9BSJ8 1104 aa18.72■□□□□ 0.59
DHFR-201ENST00000439211 MAP3K19Q56UN5 1328 aa18.72■□□□□ 0.59
DHFR-201ENST00000439211 PNMA6EA0A0J9YXQ4 647 aa18.72■□□□□ 0.59
DHFR-201ENST00000439211 FIBPO43427 364 aa18.72■□□□□ 0.59
DHFR-201ENST00000439211 NAA30Q147X3 362 aaPredicted RBP18.72■□□□□ 0.59
DHFR-201ENST00000439211 CWC15Q9P013 229 aaKnown RBP18.72■□□□□ 0.59
DHFR-201ENST00000439211 FRMPD1Q5SYB0 1578 aa18.72■□□□□ 0.59
DHFR-201ENST00000439211 LOC102724159A0A0B4J2E5 919 aa18.71■□□□□ 0.59
DHFR-201ENST00000439211 ANXA1P04083 346 aa18.71■□□□□ 0.59
DHFR-201ENST00000439211 PWP2Q15269 919 aaKnown RBP18.71■□□□□ 0.59
DHFR-201ENST00000439211 UVSSAQ2YD98 709 aa18.71■□□□□ 0.59
DHFR-201ENST00000439211 CTNNA3Q9UI47 895 aa18.71■□□□□ 0.59
DHFR-201ENST00000439211 PPP6R1Q9UPN7 881 aa18.71■□□□□ 0.59
DHFR-201ENST00000439211 VPS37CA5D8V6 355 aaPredicted RBP18.71■□□□□ 0.59
DHFR-201ENST00000439211 HNRNPH2P55795 449 aaKnown RBP18.71■□□□□ 0.59
DHFR-201ENST00000439211 NCBP1Q09161 790 aaKnown RBP18.71■□□□□ 0.59
DHFR-201ENST00000439211 DDX41Q9UJV9 622 aaKnown RBP18.71■□□□□ 0.59
DHFR-201ENST00000439211 SMC3Q9UQE7 1217 aa18.71■□□□□ 0.59
DHFR-201ENST00000439211 ZC3H13Q5T200 1668 aaKnown RBP18.71■□□□□ 0.59
DHFR-201ENST00000439211 COL3A1P02461 1466 aaPredicted RBP18.71■□□□□ 0.59
DHFR-201ENST00000439211 GOLGA6L4A6NEF3 574 aa18.71■□□□□ 0.59
DHFR-201ENST00000439211 GTF3C6Q969F1 213 aa18.71■□□□□ 0.59
DHFR-201ENST00000439211 EYA1Q99502 592 aa18.71■□□□□ 0.59
DHFR-201ENST00000439211 SRCIN1Q9C0H9 1055 aa18.71■□□□□ 0.59
DHFR-201ENST00000439211 PYCARDQ9ULZ3 195 aa18.7■□□□□ 0.58
DHFR-201ENST00000439211 PIK3R4Q99570 1358 aa18.7■□□□□ 0.58
DHFR-201ENST00000439211 PRR36Q9H6K5 1346 aa18.7■□□□□ 0.58
DHFR-201ENST00000439211 NOM1Q5C9Z4 860 aaKnown RBP18.69■□□□□ 0.58
DHFR-201ENST00000439211 AMOTL2Q9Y2J4 779 aa18.69■□□□□ 0.58
DHFR-201ENST00000439211 CD163L1Q9NR16 1453 aa18.69■□□□□ 0.58
DHFR-201ENST00000439211 ARHGAP31Q2M1Z3 1444 aa18.69■□□□□ 0.58
DHFR-201ENST00000439211 ZNF397Q8NF99 534 aaPredicted RBP18.69■□□□□ 0.58
DHFR-201ENST00000439211 RBM33Q96EV2 1170 aaKnown RBP18.69■□□□□ 0.58
DHFR-201ENST00000439211 MYCNP04198 464 aaPredicted RBP18.69■□□□□ 0.58
DHFR-201ENST00000439211 DEF6Q9H4E7 631 aa18.69■□□□□ 0.58
DHFR-201ENST00000439211 ANKRD7Q92527 254 aa18.68■□□□□ 0.58
DHFR-201ENST00000439211 TRIM5Q9C035 493 aa18.68■□□□□ 0.58
DHFR-201ENST00000439211 PALD1Q9ULE6 856 aa18.68■□□□□ 0.58
DHFR-201ENST00000439211 SPG7Q9UQ90 795 aa18.68■□□□□ 0.58
DHFR-201ENST00000439211 ADGRB2O60241 1585 aa18.68■□□□□ 0.58
DHFR-201ENST00000439211 SMTNL1A8MU46 457 aa18.68■□□□□ 0.58
DHFR-201ENST00000439211 IFIT2P09913 472 aaKnown RBP18.68■□□□□ 0.58
DHFR-201ENST00000439211 PPP1R42Q7Z4L9 355 aa18.68■□□□□ 0.58
DHFR-201ENST00000439211 CNTROBQ8N137 903 aa18.68■□□□□ 0.58
DHFR-201ENST00000439211 AIMP1Q12904 312 aaKnown RBP18.68■□□□□ 0.58
DHFR-201ENST00000439211 CCDC9Q9Y3X0 531 aaKnown RBP18.68■□□□□ 0.58
DHFR-201ENST00000439211 ARHGEF40Q8TER5 1519 aa18.67■□□□□ 0.58
DHFR-201ENST00000439211 TNRQ92752 1358 aa18.67■□□□□ 0.58
DHFR-201ENST00000439211 CAPN2P17655 700 aa18.67■□□□□ 0.58
DHFR-201ENST00000439211 ARHGEF28Q8N1W1 1705 aaKnown RBP18.67■□□□□ 0.58
DHFR-201ENST00000439211 TSPOAP1O95153 1857 aa18.67■□□□□ 0.58
DHFR-201ENST00000439211 CHMLP26374 656 aa18.67■□□□□ 0.58
DHFR-201ENST00000439211 TAF7Q15545 349 aaPredicted RBP18.67■□□□□ 0.58
DHFR-201ENST00000439211 KIF18AQ8NI77 898 aa18.67■□□□□ 0.58
DHFR-201ENST00000439211 TAOK2Q9UL54 1235 aa18.67■□□□□ 0.58
DHFR-201ENST00000439211 DIP2CQ9Y2E4 1556 aa18.67■□□□□ 0.58
DHFR-201ENST00000439211 ALKQ9UM73 1620 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms