RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 FKBP8Q14318 412 aa18.43■□□□□ 0.54
PRAME-209ENST00000439106 NLGN1Q8N2Q7 840 aa18.43■□□□□ 0.54
PRAME-209ENST00000439106 C10orf71Q711Q0 1435 aa18.42■□□□□ 0.54
PRAME-209ENST00000439106 PXDNLA1KZ92 1463 aa18.42■□□□□ 0.54
PRAME-209ENST00000439106 BTBD11A6QL63 1104 aa18.42■□□□□ 0.54
PRAME-209ENST00000439106 CANXP27824 592 aaKnown RBP18.42■□□□□ 0.54
PRAME-209ENST00000439106 VSIG10Q8N0Z9 540 aa18.42■□□□□ 0.54
PRAME-209ENST00000439106 RTF1Q92541 710 aaKnown RBP18.42■□□□□ 0.54
PRAME-209ENST00000439106 BCORQ6W2J9 1755 aa18.42■□□□□ 0.54
PRAME-209ENST00000439106 USPL1Q5W0Q7 1092 aa18.41■□□□□ 0.54
PRAME-209ENST00000439106 DDR1Q08345 913 aa18.4■□□□□ 0.54
PRAME-209ENST00000439106 RALBP1Q15311 655 aa18.4■□□□□ 0.54
PRAME-209ENST00000439106 PLEKHF1Q96S99 279 aa18.4■□□□□ 0.54
PRAME-209ENST00000439106 PARP3Q9Y6F1 533 aa18.4■□□□□ 0.54
PRAME-209ENST00000439106 NRXN2Q9P2S2 1712 aa18.4■□□□□ 0.54
PRAME-209ENST00000439106 PRAMEF22A3QJZ6 481 aa18.39■□□□□ 0.53
PRAME-209ENST00000439106 FMNL2Q96PY5 1086 aa18.39■□□□□ 0.53
PRAME-209ENST00000439106 ZNF330Q9Y3S2 320 aaPredicted RBP18.39■□□□□ 0.53
PRAME-209ENST00000439106 ARFGEF1Q9Y6D6 1849 aa18.39■□□□□ 0.53
PRAME-209ENST00000439106 THUMPD2Q9BTF0 503 aaKnown RBP18.38■□□□□ 0.53
PRAME-209ENST00000439106 MYBBP1AQ9BQG0 1328 aaKnown RBP18.38■□□□□ 0.53
PRAME-209ENST00000439106 ZPR1O75312 459 aa18.37■□□□□ 0.53
PRAME-209ENST00000439106 PIP4K2AP48426 406 aaPredicted RBP18.37■□□□□ 0.53
PRAME-209ENST00000439106 BCL2L12Q9HB09 334 aa18.37■□□□□ 0.53
PRAME-209ENST00000439106 MIS18AQ9NYP9 233 aa18.37■□□□□ 0.53
PRAME-209ENST00000439106 ANKRD31Q8N7Z5 1873 aa18.37■□□□□ 0.53
PRAME-209ENST00000439106 STARD3NLO95772 234 aa18.36■□□□□ 0.53
PRAME-209ENST00000439106 A1BGP04217 495 aa18.36■□□□□ 0.53
PRAME-209ENST00000439106 NEFMP07197 916 aa18.36■□□□□ 0.53
PRAME-209ENST00000439106 CACNA1SQ13698 1873 aa18.36■□□□□ 0.53
PRAME-209ENST00000439106 ZNF784Q8NCA9 323 aaPredicted RBP18.36■□□□□ 0.53
PRAME-209ENST00000439106 NARFQ9UHQ1 456 aa18.36■□□□□ 0.53
PRAME-209ENST00000439106 MAPK8IP3Q9UPT6 1336 aa18.36■□□□□ 0.53
PRAME-209ENST00000439106 DLEC1Q9Y238 1755 aa18.36■□□□□ 0.53
PRAME-209ENST00000439106 A0A0G2JLW4 131 aa18.35■□□□□ 0.53
PRAME-209ENST00000439106 POLRMTO00411 1230 aaKnown RBP18.35■□□□□ 0.53
PRAME-209ENST00000439106 EIF5P55010 431 aaKnown RBP18.35■□□□□ 0.53
PRAME-209ENST00000439106 USP16Q9Y5T5 823 aa18.35■□□□□ 0.53
PRAME-209ENST00000439106 HTATSF1O43719 755 aaKnown RBP18.34■□□□□ 0.53
PRAME-209ENST00000439106 GRIN3BO60391 1043 aa18.34■□□□□ 0.53
PRAME-209ENST00000439106 DPEP1P16444 411 aa18.34■□□□□ 0.53
PRAME-209ENST00000439106 NFE2L2Q16236 605 aa18.34■□□□□ 0.53
PRAME-209ENST00000439106 TM4SF1P30408 202 aa18.33■□□□□ 0.52
PRAME-209ENST00000439106 NFIXQ14938 502 aa18.33■□□□□ 0.52
PRAME-209ENST00000439106 BICDL1Q6ZP65 573 aa18.33■□□□□ 0.52
PRAME-209ENST00000439106 CCDC146Q8IYE0 955 aa18.33■□□□□ 0.52
PRAME-209ENST00000439106 TBC1D2BQ9UPU7 963 aa18.33■□□□□ 0.52
PRAME-209ENST00000439106 COL11A2P13942 1736 aaPredicted RBP18.32■□□□□ 0.52
PRAME-209ENST00000439106 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
PRAME-209ENST00000439106 TAF7Q15545 349 aaPredicted RBP18.31■□□□□ 0.52
PRAME-209ENST00000439106 CARMIL3Q8ND23 1372 aa18.3■□□□□ 0.52
PRAME-209ENST00000439106 NUP98P52948 1817 aa18.3■□□□□ 0.52
PRAME-209ENST00000439106 IL6STP40189 918 aaPredicted RBP18.3■□□□□ 0.52
PRAME-209ENST00000439106 TGFB2P61812 414 aa18.3■□□□□ 0.52
PRAME-209ENST00000439106 PRKRIP1Q9H875 184 aaPredicted RBP18.3■□□□□ 0.52
PRAME-209ENST00000439106 BCS1LQ9Y276 419 aa18.3■□□□□ 0.52
PRAME-209ENST00000439106 RRP7AQ9Y3A4 280 aaKnown RBP18.3■□□□□ 0.52
PRAME-209ENST00000439106 CCDC88AQ3V6T2 1871 aa18.3■□□□□ 0.52
PRAME-209ENST00000439106 SBF1O95248 1867 aa18.29■□□□□ 0.52
PRAME-209ENST00000439106 SNRPA1P09661 255 aaKnown RBP18.29■□□□□ 0.52
PRAME-209ENST00000439106 CHRNA5P30532 468 aa18.29■□□□□ 0.52
PRAME-209ENST00000439106 TBC1D9BQ66K14 1250 aa18.29■□□□□ 0.52
PRAME-209ENST00000439106 A0A087WZG4 1122 aa18.28■□□□□ 0.52
PRAME-209ENST00000439106 KCNA3P22001 575 aa18.28■□□□□ 0.52
PRAME-209ENST00000439106 RIPK4P57078 832 aa18.28■□□□□ 0.52
PRAME-209ENST00000439106 PNNQ9H307 717 aaKnown RBP18.28■□□□□ 0.52
PRAME-209ENST00000439106 SERPINB2P05120 415 aa18.27■□□□□ 0.52
PRAME-209ENST00000439106 NEUROD2Q15784 382 aa18.27■□□□□ 0.52
PRAME-209ENST00000439106 ATP10DQ9P241 1426 aa18.26■□□□□ 0.51
PRAME-209ENST00000439106 NBPF26B4DH59 902 aa18.26■□□□□ 0.51
PRAME-209ENST00000439106 CAMTA2O94983 1202 aa18.26■□□□□ 0.51
PRAME-209ENST00000439106 ZEB1P37275 1124 aaPredicted RBP18.26■□□□□ 0.51
PRAME-209ENST00000439106 TMPOP42166 694 aaKnown RBP18.26■□□□□ 0.51
PRAME-209ENST00000439106 WDR43Q15061 677 aaKnown RBP eCLIP18.26■□□□□ 0.518e-17■□□□□ 8.1
PRAME-209ENST00000439106 NBPF10Q6P3W6 841 aaKnown RBP18.26■□□□□ 0.51
PRAME-209ENST00000439106 DZIP3Q86Y13 1208 aaKnown RBP18.26■□□□□ 0.51
PRAME-209ENST00000439106 CCDC24Q8N4L8 307 aa18.26■□□□□ 0.51
PRAME-209ENST00000439106 NBPF15Q8N660 670 aa18.26■□□□□ 0.51
PRAME-209ENST00000439106 EIF4A1P60842 406 aaKnown RBP18.24■□□□□ 0.51
PRAME-209ENST00000439106 NPM2Q86SE8 214 aaKnown RBP18.24■□□□□ 0.51
PRAME-209ENST00000439106 PNISRQ8TF01 805 aaKnown RBP18.24■□□□□ 0.51
PRAME-209ENST00000439106 ADAMTS8Q9UP79 889 aa18.24■□□□□ 0.51
PRAME-209ENST00000439106 ADCY9O60503 1353 aa18.24■□□□□ 0.51
PRAME-209ENST00000439106 PIM2Q9P1W9 311 aa18.23■□□□□ 0.51
PRAME-209ENST00000439106 GIGYF1O75420 1035 aaPredicted RBP18.22■□□□□ 0.51
PRAME-209ENST00000439106 TSPYL4Q9UJ04 414 aa18.22■□□□□ 0.51
PRAME-209ENST00000439106 ARFGEF2Q9Y6D5 1785 aa18.22■□□□□ 0.51
PRAME-209ENST00000439106 ARHGAP27Q6ZUM4 889 aa18.21■□□□□ 0.51
PRAME-209ENST00000439106 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
PRAME-209ENST00000439106 ZNF526Q8TF50 670 aaPredicted RBP18.21■□□□□ 0.51
PRAME-209ENST00000439106 RUNDC1Q96C34 613 aa18.21■□□□□ 0.51
PRAME-209ENST00000439106 CCDC184Q52MB2 194 aa18.2■□□□□ 0.5
PRAME-209ENST00000439106 DALRD3Q5D0E6 543 aaKnown RBP18.2■□□□□ 0.5
PRAME-209ENST00000439106 PRR5LQ6MZQ0 368 aa18.2■□□□□ 0.5
PRAME-209ENST00000439106 SLX4Q8IY92 1834 aa18.2■□□□□ 0.5
PRAME-209ENST00000439106 TNRC6CQ9HCJ0 1690 aaKnown RBP18.19■□□□□ 0.5
PRAME-209ENST00000439106 TRIM35Q9UPQ4 493 aa18.19■□□□□ 0.5
PRAME-209ENST00000439106 ANKRD36CQ5JPF3 1778 aa18.19■□□□□ 0.5
PRAME-209ENST00000439106 MYL6BP14649 208 aa18.18■□□□□ 0.5
PRAME-209ENST00000439106 LMOD3Q0VAK6 560 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms