RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 GPAMQ9HCL2 828 aa6.95□□□□□ -1.3
HMGB3P12-201ENST00000438745 MBIPQ9NS73 344 aa6.95□□□□□ -1.3
HMGB3P12-201ENST00000438745 NDFIP2Q9NV92 336 aa6.95□□□□□ -1.3
HMGB3P12-201ENST00000438745 FAM196BA6NMK8 535 aa6.94□□□□□ -1.3
HMGB3P12-201ENST00000438745 NOS2P35228 1153 aa6.94□□□□□ -1.3
HMGB3P12-201ENST00000438745 SRPK2P78362 688 aaKnown RBP6.94□□□□□ -1.3
HMGB3P12-201ENST00000438745 CRTC2Q53ET0 693 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P12-201ENST00000438745 SLC9A9Q8IVB4 645 aa6.94□□□□□ -1.3
HMGB3P12-201ENST00000438745 CABP1Q9NZU7 370 aa6.94□□□□□ -1.3
HMGB3P12-201ENST00000438745 SFI1A8K8P3 1242 aa6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 EML1O00423 815 aa6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 ADAMTS2O95450 1211 aa6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 CSB-PGBD3P0DP91 1061 aa6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 SEC13P55735 322 aa6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 ZNF385CQ66K41 422 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 LARP1Q6PKG0 1096 aaKnown RBP6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 NLRP8Q86W28 1048 aa6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 PGBD3Q8N328 593 aa6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 L3MBTL2Q969R5 705 aa6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 AIDAQ96BJ3 306 aa6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 ZNF594Q96JF6 807 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 TRERF1Q96PN7 1200 aa6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 ARXQ96QS3 562 aa6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 ZIC5Q96T25 663 aa6.93□□□□□ -1.3
HMGB3P12-201ENST00000438745 C21orf2O43822 256 aa6.92□□□□□ -1.3
HMGB3P12-201ENST00000438745 HIRAP54198 1017 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P12-201ENST00000438745 EFHC2Q5JST6 749 aa6.92□□□□□ -1.3
HMGB3P12-201ENST00000438745 STAG2Q8N3U4 1231 aa6.92□□□□□ -1.3
HMGB3P12-201ENST00000438745 TSEN2Q8NCE0 465 aaKnown RBP6.92□□□□□ -1.3
HMGB3P12-201ENST00000438745 GAS2L2Q8NHY3 880 aa6.92□□□□□ -1.3
HMGB3P12-201ENST00000438745 ZCCHC2Q9C0B9 1178 aaKnown RBP6.92□□□□□ -1.3
HMGB3P12-201ENST00000438745 TSPAN10Q9H1Z9 355 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P12-201ENST00000438745 ADAMTS8Q9UP79 889 aa6.92□□□□□ -1.3
HMGB3P12-201ENST00000438745 USP17L15C9J2P7 530 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 USP17L10C9JJH3 530 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 USP17L13C9JLJ4 530 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 USP17L12C9JPN9 530 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 USP17L11C9JVI0 530 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 USP17L21D6R901 530 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 USP17L18D6R9N7 530 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 USP17L22D6RA61 530 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 USP17L17D6RBQ6 530 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 USP17L19D6RCP7 530 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 USP17L20D6RJB6 530 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 BNIP3LO60238 219 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 ARHGEF15O94989 841 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 TXLNAP40222 546 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 USP17L24Q0WX57 530 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 KCNMA1Q12791 1236 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 DPYDQ12882 1025 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 NBPF1Q3BBV0 1214 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 LYPD4Q6UWN0 246 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 ANKMY2Q8IV38 441 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 KCTD17Q8N5Z5 321 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 PARP3Q9Y6F1 533 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 IGF1RP08069 1367 aa6.91□□□□□ -1.3
HMGB3P12-201ENST00000438745 A0A1W2PNR3 127 aa6.9□□□□□ -1.3
HMGB3P12-201ENST00000438745 PSMA6P60900 246 aaKnown RBP6.9□□□□□ -1.3
HMGB3P12-201ENST00000438745 TBCELQ5QJ74 424 aa6.9□□□□□ -1.3
HMGB3P12-201ENST00000438745 FIGNL1Q6PIW4 674 aa6.9□□□□□ -1.3
HMGB3P12-201ENST00000438745 HCN2Q9UL51 889 aa6.9□□□□□ -1.3
HMGB3P12-201ENST00000438745 ATXN7L1Q9ULK2 861 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P12-201ENST00000438745 PHF24Q9UPV7 400 aa6.9□□□□□ -1.3
HMGB3P12-201ENST00000438745 PCDHGC4Q9Y5F7 938 aa6.9□□□□□ -1.3
HMGB3P12-201ENST00000438745 ATAD2Q6PL18 1390 aa6.9□□□□□ -1.31
HMGB3P12-201ENST00000438745 SERTM1A2A2V5 107 aa6.89□□□□□ -1.31
HMGB3P12-201ENST00000438745 CELA2BP08218 269 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P12-201ENST00000438745 TATP17735 454 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P12-201ENST00000438745 MX2P20592 715 aa6.89□□□□□ -1.31
HMGB3P12-201ENST00000438745 SH3PXD2AQ5TCZ1 1133 aa6.89□□□□□ -1.31
HMGB3P12-201ENST00000438745 SAMD5Q5TGI4 173 aa6.89□□□□□ -1.31
HMGB3P12-201ENST00000438745 C1orf53Q5VUE5 145 aa6.89□□□□□ -1.31
HMGB3P12-201ENST00000438745 LRRC4BQ9NT99 713 aa6.89□□□□□ -1.31
HMGB3P12-201ENST00000438745 RBM19Q9Y4C8 960 aaKnown RBP6.89□□□□□ -1.31
HMGB3P12-201ENST00000438745 GPC6Q9Y625 555 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P12-201ENST00000438745 C2CD2LO14523 706 aa6.88□□□□□ -1.31
HMGB3P12-201ENST00000438745 TNP2Q05952 138 aa6.88□□□□□ -1.31
HMGB3P12-201ENST00000438745 ARSJQ5FYB0 599 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P12-201ENST00000438745 ACDQ96AP0 544 aa6.88□□□□□ -1.31
HMGB3P12-201ENST00000438745 C2orf49Q9BVC5 232 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P12-201ENST00000438745 MAP2K3P46734 347 aa6.87□□□□□ -1.31
HMGB3P12-201ENST00000438745 ELOAQ14241 798 aaKnown RBP6.87□□□□□ -1.31
HMGB3P12-201ENST00000438745 FAM182BQ5T319 152 aa6.87□□□□□ -1.31
HMGB3P12-201ENST00000438745 SVOPQ8N4V2 548 aa6.87□□□□□ -1.31
HMGB3P12-201ENST00000438745 KLRG1Q96E93 195 aa6.87□□□□□ -1.31
HMGB3P12-201ENST00000438745 ABHD17AQ96GS6 310 aa6.87□□□□□ -1.31
HMGB3P12-201ENST00000438745 NSFL1CQ9UNZ2 370 aaKnown RBP6.87□□□□□ -1.31
HMGB3P12-201ENST00000438745 ATXN7O15265 892 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P12-201ENST00000438745 EFSO43281 561 aa6.86□□□□□ -1.31
HMGB3P12-201ENST00000438745 FGFR3P22607 806 aa6.86□□□□□ -1.31
HMGB3P12-201ENST00000438745 RFX1P22670 979 aa6.86□□□□□ -1.31
HMGB3P12-201ENST00000438745 IGFBP4P22692 258 aa6.86□□□□□ -1.31
HMGB3P12-201ENST00000438745 CTBSQ01459 385 aa6.86□□□□□ -1.31
HMGB3P12-201ENST00000438745 RASSF7Q02833 373 aa6.86□□□□□ -1.31
HMGB3P12-201ENST00000438745 ZNF232Q9UNY5 417 aa6.86□□□□□ -1.31
HMGB3P12-201ENST00000438745 LOC100996750A0A140TA64 210 aa6.85□□□□□ -1.31
HMGB3P12-201ENST00000438745 PPP1R12BO60237 982 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P12-201ENST00000438745 GDF11O95390 407 aa6.85□□□□□ -1.31
HMGB3P12-201ENST00000438745 FAM157BP0CG42 384 aa6.85□□□□□ -1.31
HMGB3P12-201ENST00000438745 MAPTP10636 758 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms