RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 TUBGCP6Q96RT7 1819 aa21.41■■□□□ 1.02
CTSD-205ENST00000438213 SRCAPQ6ZRS2 3230 aa21.4■■□□□ 1.02
CTSD-205ENST00000438213 CANXP27824 592 aaKnown RBP21.4■■□□□ 1.02
CTSD-205ENST00000438213 EIF4A1P60842 406 aaKnown RBP21.4■■□□□ 1.02
CTSD-205ENST00000438213 NPM2Q86SE8 214 aaKnown RBP21.4■■□□□ 1.02
CTSD-205ENST00000438213 ARXQ96QS3 562 aa21.4■■□□□ 1.02
CTSD-205ENST00000438213 USP16Q9Y5T5 823 aa21.4■■□□□ 1.02
CTSD-205ENST00000438213 UBR2Q8IWV8 1755 aa21.4■■□□□ 1.02
CTSD-205ENST00000438213 COL5A3P25940 1745 aaPredicted RBP21.4■■□□□ 1.02
CTSD-205ENST00000438213 TJP1Q07157 1748 aa21.39■■□□□ 1.01
CTSD-205ENST00000438213 DIEXFQ68CQ4 756 aaKnown RBP21.39■■□□□ 1.01
CTSD-205ENST00000438213 MSL1Q68DK7 614 aa21.39■■□□□ 1.01
CTSD-205ENST00000438213 NLGN1Q8N2Q7 840 aa21.39■■□□□ 1.01
CTSD-205ENST00000438213 ZBTB1Q9Y2K1 713 aa21.39■■□□□ 1.01
CTSD-205ENST00000438213 LAS1LQ9Y4W2 734 aaKnown RBP21.39■■□□□ 1.01
CTSD-205ENST00000438213 CICQ96RK0 1608 aaPredicted RBP21.39■■□□□ 1.01
CTSD-205ENST00000438213 MYH14Q7Z406 1995 aaKnown RBP21.39■■□□□ 1.01
CTSD-205ENST00000438213 A0A087WZG4 1122 aa21.38■■□□□ 1.01
CTSD-205ENST00000438213 CHL1O00533 1208 aa21.38■■□□□ 1.01
CTSD-205ENST00000438213 SOS1Q07889 1333 aaPredicted RBP21.37■■□□□ 1.01
CTSD-205ENST00000438213 CCER2I3L3R5 266 aa21.37■■□□□ 1.01
CTSD-205ENST00000438213 ZPR1O75312 459 aa21.37■■□□□ 1.01
CTSD-205ENST00000438213 GIGYF1O75420 1035 aaPredicted RBP21.37■■□□□ 1.01
CTSD-205ENST00000438213 A1BGP04217 495 aa21.37■■□□□ 1.01
CTSD-205ENST00000438213 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
CTSD-205ENST00000438213 IL6STP40189 918 aaPredicted RBP21.36■■□□□ 1.01
CTSD-205ENST00000438213 CFAP44Q96MT7 982 aa21.36■■□□□ 1.01
CTSD-205ENST00000438213 PRAMEF22A3QJZ6 481 aa21.35■■□□□ 1.01
CTSD-205ENST00000438213 EIF5P55010 431 aaKnown RBP21.35■■□□□ 1.01
CTSD-205ENST00000438213 CCDC27Q2M243 656 aa21.35■■□□□ 1.01
CTSD-205ENST00000438213 GYS1P13807 737 aa21.34■■□□□ 1.01
CTSD-205ENST00000438213 GNAI1P63096 354 aa21.34■■□□□ 1.01
CTSD-205ENST00000438213 NGEFQ8N5V2 710 aa21.33■■□□□ 1.01
CTSD-205ENST00000438213 NARFQ9UHQ1 456 aa21.33■■□□□ 1.01
CTSD-205ENST00000438213 ZNF330Q9Y3S2 320 aaPredicted RBP21.33■■□□□ 1.01
CTSD-205ENST00000438213 USP42Q9H9J4 1324 aaKnown RBP21.32■■□□□ 1
CTSD-205ENST00000438213 IFT57Q9NWB7 429 aa21.32■■□□□ 1
CTSD-205ENST00000438213 SRP68Q9UHB9 627 aaKnown RBP21.32■■□□□ 1
CTSD-205ENST00000438213 COL15A1P39059 1388 aa21.32■■□□□ 1
CTSD-205ENST00000438213 WWC1Q8IX03 1113 aa21.31■■□□□ 1
CTSD-205ENST00000438213 FHDC1Q9C0D6 1143 aaPredicted RBP21.31■■□□□ 1
CTSD-205ENST00000438213 ZNF853P0CG23 659 aa21.3■■□□□ 1
CTSD-205ENST00000438213 USPL1Q5W0Q7 1092 aa21.3■■□□□ 1
CTSD-205ENST00000438213 SYT17Q9BSW7 474 aa21.3■■□□□ 1
CTSD-205ENST00000438213 KDM3BQ7LBC6 1761 aa21.3■■□□□ 1
CTSD-205ENST00000438213 SENP3-EIF4A1A0A087X0R7 540 aa21.29■■□□□ 1
CTSD-205ENST00000438213 MMP10P09238 476 aa21.29■■□□□ 1
CTSD-205ENST00000438213 KLHL34Q8N239 644 aa21.29■■□□□ 1
CTSD-205ENST00000438213 PARP3Q9Y6F1 533 aa21.29■■□□□ 1
CTSD-205ENST00000438213 FKBP8Q14318 412 aa21.28■■□□□ 1
CTSD-205ENST00000438213 MBIPQ9NS73 344 aa21.28■■□□□ 1
CTSD-205ENST00000438213 TBC1D2BQ9UPU7 963 aa21.28■■□□□ 1
CTSD-205ENST00000438213 SALL2Q9Y467 1007 aaPredicted RBP21.28■■□□□ 1
CTSD-205ENST00000438213 COL24A1Q17RW2 1714 aa21.27■■□□□ 1
CTSD-205ENST00000438213 DCAF8L1A6NGE4 600 aa21.27■■□□□ 1
CTSD-205ENST00000438213 NBPF26B4DH59 902 aa21.27■■□□□ 1
CTSD-205ENST00000438213 EIF2S2P20042 333 aaKnown RBP21.27■■□□□ 1
CTSD-205ENST00000438213 PIP4K2AP48426 406 aaPredicted RBP21.27■■□□□ 1
CTSD-205ENST00000438213 NBPF10Q6P3W6 841 aaKnown RBP21.27■■□□□ 1
CTSD-205ENST00000438213 NBPF15Q8N660 670 aa21.27■■□□□ 1
CTSD-205ENST00000438213 DZIP3Q86Y13 1208 aaKnown RBP21.26■□□□□ 0.99
CTSD-205ENST00000438213 WDR63Q8IWG1 891 aa21.26■□□□□ 0.99
CTSD-205ENST00000438213 CD2APQ9Y5K6 639 aa21.26■□□□□ 0.99
CTSD-205ENST00000438213 IL16Q14005 1332 aa21.26■□□□□ 0.99
CTSD-205ENST00000438213 ERBB4Q15303 1308 aa21.26■□□□□ 0.99
CTSD-205ENST00000438213 HOXB7P09629 217 aa21.25■□□□□ 0.99
CTSD-205ENST00000438213 MIER1Q8N108 512 aa21.25■□□□□ 0.99
CTSD-205ENST00000438213 TM4SF1P30408 202 aa21.24■□□□□ 0.99
CTSD-205ENST00000438213 CHMP4AQ9BY43 222 aa21.24■□□□□ 0.99
CTSD-205ENST00000438213 DUSP27Q5VZP5 1158 aa21.23■□□□□ 0.99
CTSD-205ENST00000438213 BCL2L12Q9HB09 334 aa21.23■□□□□ 0.99
CTSD-205ENST00000438213 MYL6BP14649 208 aa21.22■□□□□ 0.99
CTSD-205ENST00000438213 KRT24Q2M2I5 525 aa21.22■□□□□ 0.99
CTSD-205ENST00000438213 CLEC4GQ6UXB4 293 aa21.22■□□□□ 0.99
CTSD-205ENST00000438213 ZNF652Q9Y2D9 606 aa21.22■□□□□ 0.99
CTSD-205ENST00000438213 C4AP0C0L4 1744 aa21.21■□□□□ 0.99
CTSD-205ENST00000438213 RGL2O15211 777 aa21.21■□□□□ 0.99
CTSD-205ENST00000438213 CAMTA2O94983 1202 aa21.21■□□□□ 0.99
CTSD-205ENST00000438213 NFIXQ14938 502 aa21.21■□□□□ 0.99
CTSD-205ENST00000438213 HDGFL1Q5TGJ6 251 aa21.2■□□□□ 0.98
CTSD-205ENST00000438213 NECTIN2Q92692 538 aa21.2■□□□□ 0.98
CTSD-205ENST00000438213 POLRMTO00411 1230 aaKnown RBP21.19■□□□□ 0.98
CTSD-205ENST00000438213 KIF6Q6ZMV9 814 aa21.19■□□□□ 0.98
CTSD-205ENST00000438213 BICDL1Q6ZP65 573 aa21.19■□□□□ 0.98
CTSD-205ENST00000438213 SETDB2Q96T68 719 aa21.19■□□□□ 0.98
CTSD-205ENST00000438213 ERVV-1B6SEH8 477 aa21.18■□□□□ 0.98
CTSD-205ENST00000438213 ELL2O00472 640 aaPredicted RBP21.18■□□□□ 0.98
CTSD-205ENST00000438213 DDR1Q08345 913 aa21.18■□□□□ 0.98
CTSD-205ENST00000438213 PDIA6Q15084 440 aa21.18■□□□□ 0.98
CTSD-205ENST00000438213 TBC1D9BQ66K14 1250 aa21.18■□□□□ 0.98
CTSD-205ENST00000438213 DDX21Q9NR30 783 aaKnown RBP eCLIP21.18■□□□□ 0.98
CTSD-205ENST00000438213 SERPINB2P05120 415 aa21.17■□□□□ 0.98
CTSD-205ENST00000438213 TSR2Q969E8 191 aaKnown RBP21.17■□□□□ 0.98
CTSD-205ENST00000438213 DBF4Q9UBU7 674 aaPredicted RBP21.17■□□□□ 0.98
CTSD-205ENST00000438213 LAMB4A4D0S4 1761 aa21.17■□□□□ 0.98
CTSD-205ENST00000438213 C8orf58Q8NAV2 365 aa21.16■□□□□ 0.98
CTSD-205ENST00000438213 NLGN2Q8NFZ4 835 aa21.16■□□□□ 0.98
CTSD-205ENST00000438213 TGFB2P61812 414 aa21.15■□□□□ 0.98
CTSD-205ENST00000438213 GOLGA2Q08379 1002 aa21.15■□□□□ 0.98
CTSD-205ENST00000438213 TTLL7Q6ZT98 887 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms