RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 IPO8O15397 1037 aaKnown RBP27.28■■□□□ 1.96
YBX1-203ENST00000436427 SLC4A9Q96Q91 983 aa27.28■■□□□ 1.96
YBX1-203ENST00000436427 TEX13AQ9BXU3 409 aaPredicted RBP27.28■■□□□ 1.96
YBX1-203ENST00000436427 LOC102724428A0A0B4J2F2 783 aa27.27■■□□□ 1.96
YBX1-203ENST00000436427 SIK1P57059 783 aa27.27■■□□□ 1.96
YBX1-203ENST00000436427 DNAJC10Q8IXB1 793 aa27.27■■□□□ 1.96
YBX1-203ENST00000436427 ATP6V1AP38606 617 aa27.26■■□□□ 1.96
YBX1-203ENST00000436427 ANXA1P04083 346 aa27.26■■□□□ 1.95
YBX1-203ENST00000436427 C20orf194Q5TEA3 1177 aa27.25■■□□□ 1.95
YBX1-203ENST00000436427 ATF7IPQ6VMQ6 1270 aa27.25■■□□□ 1.95
YBX1-203ENST00000436427 G2E3Q7L622 706 aa27.25■■□□□ 1.95
YBX1-203ENST00000436427 TJP1Q07157 1748 aa27.25■■□□□ 1.95
YBX1-203ENST00000436427 STARD3NLO95772 234 aa27.24■■□□□ 1.95
YBX1-203ENST00000436427 PROSER3Q2NL68 480 aa27.24■■□□□ 1.95
YBX1-203ENST00000436427 DDX21Q9NR30 783 aaKnown RBP eCLIP27.24■■□□□ 1.95
YBX1-203ENST00000436427 TRIM27P14373 513 aa27.23■■□□□ 1.95
YBX1-203ENST00000436427 MYL6BP14649 208 aa27.23■■□□□ 1.95
YBX1-203ENST00000436427 FKBP8Q14318 412 aa27.23■■□□□ 1.95
YBX1-203ENST00000436427 CLUAP1Q96AJ1 413 aa27.23■■□□□ 1.95
YBX1-203ENST00000436427 PHAXQ9H814 394 aaKnown RBP27.23■■□□□ 1.95
YBX1-203ENST00000436427 TNNQ9UQP3 1299 aa27.23■■□□□ 1.95
YBX1-203ENST00000436427 CACNA1FO60840 1977 aa27.23■■□□□ 1.95
YBX1-203ENST00000436427 PIP4K2AP48426 406 aaPredicted RBP27.22■■□□□ 1.95
YBX1-203ENST00000436427 FLIIQ13045 1269 aa27.22■■□□□ 1.95
YBX1-203ENST00000436427 PDIA6Q15084 440 aa27.22■■□□□ 1.95
YBX1-203ENST00000436427 FTSJ3Q8IY81 847 aaKnown RBP27.22■■□□□ 1.95
YBX1-203ENST00000436427 ARHGAP45Q92619 1136 aa27.22■■□□□ 1.95
YBX1-203ENST00000436427 PTPRCP08575 1304 aa27.22■■□□□ 1.95
YBX1-203ENST00000436427 A1BGP04217 495 aa27.21■■□□□ 1.95
YBX1-203ENST00000436427 HYPKQ9NX55 129 aa27.21■■□□□ 1.95
YBX1-203ENST00000436427 ERBB4Q15303 1308 aa27.21■■□□□ 1.95
YBX1-203ENST00000436427 CYP19A1P11511 503 aaPredicted RBP27.2■■□□□ 1.94
YBX1-203ENST00000436427 MS4A1P11836 297 aa27.2■■□□□ 1.94
YBX1-203ENST00000436427 FKBP5Q13451 457 aaPredicted RBP27.2■■□□□ 1.94
YBX1-203ENST00000436427 PDE3AQ14432 1141 aa27.2■■□□□ 1.94
YBX1-203ENST00000436427 DZIP1LQ8IYY4 767 aaKnown RBP27.2■■□□□ 1.94
YBX1-203ENST00000436427 PANK1Q8TE04 598 aa27.2■■□□□ 1.94
YBX1-203ENST00000436427 API5Q9BZZ5 524 aaKnown RBP27.2■■□□□ 1.94
YBX1-203ENST00000436427 CICQ96RK0 1608 aaPredicted RBP27.19■■□□□ 1.94
YBX1-203ENST00000436427 ITPK1Q13572 414 aa27.19■■□□□ 1.94
YBX1-203ENST00000436427 ZNF831Q5JPB2 1677 aa27.19■■□□□ 1.94
YBX1-203ENST00000436427 LY75O60449 1722 aa27.18■■□□□ 1.94
YBX1-203ENST00000436427 CCNL1Q9UK58 526 aaPredicted RBP27.18■■□□□ 1.94
YBX1-203ENST00000436427 NBPF26B4DH59 902 aa27.17■■□□□ 1.94
YBX1-203ENST00000436427 KCNQ4P56696 695 aa27.17■■□□□ 1.94
YBX1-203ENST00000436427 NBPF14Q5TI25 921 aa27.17■■□□□ 1.94
YBX1-203ENST00000436427 NBPF10Q6P3W6 841 aaKnown RBP27.17■■□□□ 1.94
YBX1-203ENST00000436427 NBPF15Q8N660 670 aa27.17■■□□□ 1.94
YBX1-203ENST00000436427 RLBP1P12271 317 aa27.16■■□□□ 1.94
YBX1-203ENST00000436427 AIMP1Q12904 312 aaKnown RBP27.16■■□□□ 1.94
YBX1-203ENST00000436427 CRBNQ96SW2 442 aa27.15■■□□□ 1.94
YBX1-203ENST00000436427 APBA3O96018 575 aa27.14■■□□□ 1.94
YBX1-203ENST00000436427 COL5A3P25940 1745 aaPredicted RBP27.13■■□□□ 1.93
YBX1-203ENST00000436427 CRKLP46109 303 aaKnown RBP27.13■■□□□ 1.93
YBX1-203ENST00000436427 LRP10Q7Z4F1 713 aa27.13■■□□□ 1.93
YBX1-203ENST00000436427 XAGE3Q8WTP9 111 aa27.13■■□□□ 1.93
YBX1-203ENST00000436427 ZBTB1Q9Y2K1 713 aa27.13■■□□□ 1.93
YBX1-203ENST00000436427 COG6Q9Y2V7 657 aa27.13■■□□□ 1.93
YBX1-203ENST00000436427 ZNF330Q9Y3S2 320 aaPredicted RBP27.13■■□□□ 1.93
YBX1-203ENST00000436427 F6X3S4 739 aa27.12■■□□□ 1.93
YBX1-203ENST00000436427 COPS6Q7L5N1 327 aa27.12■■□□□ 1.93
YBX1-203ENST00000436427 LINC00116Q8NCU8 138 aa27.12■■□□□ 1.93
YBX1-203ENST00000436427 CCDC87Q9NVE4 849 aa27.12■■□□□ 1.93
YBX1-203ENST00000436427 ABCC4O15439 1325 aa27.12■■□□□ 1.93
YBX1-203ENST00000436427 TNS1Q9HBL0 1735 aaKnown RBP27.12■■□□□ 1.93
YBX1-203ENST00000436427 DDX58O95786 925 aaKnown RBP27.11■■□□□ 1.93
YBX1-203ENST00000436427 TMEM57Q8N5G2 664 aa27.11■■□□□ 1.93
YBX1-203ENST00000436427 SLC4A10Q6U841 1118 aa27.11■■□□□ 1.93
YBX1-203ENST00000436427 EXOC6Q8TAG9 804 aa27.11■■□□□ 1.93
YBX1-203ENST00000436427 INTS5Q6P9B9 1019 aaKnown RBP27.1■■□□□ 1.93
YBX1-203ENST00000436427 ITPRIPQ8IWB1 547 aa27.1■■□□□ 1.93
YBX1-203ENST00000436427 PI4KAP2A4QPH2 592 aa27.09■■□□□ 1.93
YBX1-203ENST00000436427 PI4KAP1Q8N8J0 262 aa27.09■■□□□ 1.93
YBX1-203ENST00000436427 MVPQ14764 893 aaKnown RBP27.08■■□□□ 1.93
YBX1-203ENST00000436427 SLC27A3Q5K4L6 730 aa27.08■■□□□ 1.93
YBX1-203ENST00000436427 RREB1Q92766 1687 aa27.07■■□□□ 1.92
YBX1-203ENST00000436427 ADCY9O60503 1353 aa27.07■■□□□ 1.92
YBX1-203ENST00000436427 PLSCR1O15162 318 aa27.07■■□□□ 1.92
YBX1-203ENST00000436427 KSR2Q6VAB6 950 aa27.07■■□□□ 1.92
YBX1-203ENST00000436427 NPM2Q86SE8 214 aaKnown RBP27.07■■□□□ 1.92
YBX1-203ENST00000436427 LRRC4BQ9NT99 713 aa27.07■■□□□ 1.92
YBX1-203ENST00000436427 CNTNAP4Q9C0A0 1308 aa27.06■■□□□ 1.92
YBX1-203ENST00000436427 IL6STP40189 918 aaPredicted RBP27.06■■□□□ 1.92
YBX1-203ENST00000436427 RIC3Q7Z5B4 369 aa27.06■■□□□ 1.92
YBX1-203ENST00000436427 DNAAF4Q8WXU2 420 aa27.06■■□□□ 1.92
YBX1-203ENST00000436427 MAP3K2Q9Y2U5 619 aa27.06■■□□□ 1.92
YBX1-203ENST00000436427 TAF1LQ8IZX4 1826 aa27.06■■□□□ 1.92
YBX1-203ENST00000436427 TXNRD1Q16881 649 aa27.06■■□□□ 1.92
YBX1-203ENST00000436427 TTLL7Q6ZT98 887 aa27.06■■□□□ 1.92
YBX1-203ENST00000436427 ANKRD13DQ6ZTN6 518 aa27.06■■□□□ 1.92
YBX1-203ENST00000436427 ARXQ96QS3 562 aa27.06■■□□□ 1.92
YBX1-203ENST00000436427 MYH14Q7Z406 1995 aaKnown RBP27.04■■□□□ 1.92
YBX1-203ENST00000436427 INTS3Q68E01 1043 aaKnown RBP27.04■■□□□ 1.92
YBX1-203ENST00000436427 PXDNLA1KZ92 1463 aa27.04■■□□□ 1.92
YBX1-203ENST00000436427 CCT4P50991 539 aaKnown RBP27.03■■□□□ 1.92
YBX1-203ENST00000436427 SF3B2Q13435 895 aaKnown RBP27.03■■□□□ 1.92
YBX1-203ENST00000436427 ERICH6BQ5W0A0 696 aa27.03■■□□□ 1.92
YBX1-203ENST00000436427 KIF6Q6ZMV9 814 aa27.03■■□□□ 1.92
YBX1-203ENST00000436427 PELP1Q8IZL8 1130 aaKnown RBP27.03■■□□□ 1.92
YBX1-203ENST00000436427 DDX19BQ9UMR2 479 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms