RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 MAPK8IP3Q9UPT6 1336 aa24.26■■□□□ 1.47
HMGN1-207ENST00000436324 SIPA1L3O60292 1781 aaPredicted RBP24.25■■□□□ 1.47
HMGN1-207ENST00000436324 YBX3P16989 372 aaKnown RBP eCLIP24.25■■□□□ 1.47
HMGN1-207ENST00000436324 NFE2L2Q16236 605 aa24.25■■□□□ 1.47
HMGN1-207ENST00000436324 USPL1Q5W0Q7 1092 aa24.25■■□□□ 1.47
HMGN1-207ENST00000436324 UBR2Q8IWV8 1755 aa24.24■■□□□ 1.47
HMGN1-207ENST00000436324 TEX13AQ9BXU3 409 aaPredicted RBP24.24■■□□□ 1.47
HMGN1-207ENST00000436324 C4AP0C0L4 1744 aa24.24■■□□□ 1.47
HMGN1-207ENST00000436324 MIS18AQ9NYP9 233 aa24.23■■□□□ 1.47
HMGN1-207ENST00000436324 ZNF330Q9Y3S2 320 aaPredicted RBP24.23■■□□□ 1.47
HMGN1-207ENST00000436324 COL15A1P39059 1388 aa24.23■■□□□ 1.47
HMGN1-207ENST00000436324 TAF7Q15545 349 aaPredicted RBP24.22■■□□□ 1.47
HMGN1-207ENST00000436324 THUMPD2Q9BTF0 503 aaKnown RBP24.22■■□□□ 1.47
HMGN1-207ENST00000436324 A1BGP04217 495 aa24.21■■□□□ 1.47
HMGN1-207ENST00000436324 PRKRIP1Q9H875 184 aaPredicted RBP24.21■■□□□ 1.47
HMGN1-207ENST00000436324 PRAMEF22A3QJZ6 481 aa24.2■■□□□ 1.46
HMGN1-207ENST00000436324 NARFQ9UHQ1 456 aa24.2■■□□□ 1.46
HMGN1-207ENST00000436324 USP16Q9Y5T5 823 aa24.2■■□□□ 1.46
HMGN1-207ENST00000436324 DDR1Q08345 913 aa24.19■■□□□ 1.46
HMGN1-207ENST00000436324 CCDC146Q8IYE0 955 aa24.19■■□□□ 1.46
HMGN1-207ENST00000436324 GRIN3BO60391 1043 aa24.18■■□□□ 1.46
HMGN1-207ENST00000436324 EIF5P55010 431 aaKnown RBP24.18■■□□□ 1.46
HMGN1-207ENST00000436324 SNRPA1P09661 255 aaKnown RBP24.17■■□□□ 1.46
HMGN1-207ENST00000436324 PIP4K2AP48426 406 aaPredicted RBP24.17■■□□□ 1.46
HMGN1-207ENST00000436324 WDR43Q15061 677 aaKnown RBP eCLIP24.17■■□□□ 1.46
HMGN1-207ENST00000436324 A0A087WZG4 1122 aa24.16■■□□□ 1.46
HMGN1-207ENST00000436324 A0A0G2JLW4 131 aa24.16■■□□□ 1.46
HMGN1-207ENST00000436324 TM4SF1P30408 202 aa24.16■■□□□ 1.46
HMGN1-207ENST00000436324 RIPK4P57078 832 aa24.16■■□□□ 1.46
HMGN1-207ENST00000436324 BCL2L12Q9HB09 334 aa24.16■■□□□ 1.46
HMGN1-207ENST00000436324 POLRMTO00411 1230 aaKnown RBP24.15■■□□□ 1.46
HMGN1-207ENST00000436324 NFIXQ14938 502 aa24.15■■□□□ 1.46
HMGN1-207ENST00000436324 NPM2Q86SE8 214 aaKnown RBP24.15■■□□□ 1.46
HMGN1-207ENST00000436324 TBC1D2BQ9UPU7 963 aa24.15■■□□□ 1.46
HMGN1-207ENST00000436324 RRP7AQ9Y3A4 280 aaKnown RBP24.15■■□□□ 1.46
HMGN1-207ENST00000436324 C10orf71Q711Q0 1435 aa24.15■■□□□ 1.46
HMGN1-207ENST00000436324 IL6STP40189 918 aaPredicted RBP24.14■■□□□ 1.45
HMGN1-207ENST00000436324 TGFB2P61812 414 aa24.14■■□□□ 1.45
HMGN1-207ENST00000436324 BICDL1Q6ZP65 573 aa24.14■■□□□ 1.45
HMGN1-207ENST00000436324 DLG5Q8TDM6 1919 aa24.14■■□□□ 1.45
HMGN1-207ENST00000436324 DPEP1P16444 411 aa24.13■■□□□ 1.45
HMGN1-207ENST00000436324 TMPOP42166 694 aaKnown RBP24.13■■□□□ 1.45
HMGN1-207ENST00000436324 NEUROD2Q15784 382 aa24.13■■□□□ 1.45
HMGN1-207ENST00000436324 PNISRQ8TF01 805 aaKnown RBP24.13■■□□□ 1.45
HMGN1-207ENST00000436324 PXDNLA1KZ92 1463 aa24.13■■□□□ 1.45
HMGN1-207ENST00000436324 ADAMTS8Q9UP79 889 aa24.12■■□□□ 1.45
HMGN1-207ENST00000436324 ZNF316A6NFI3 1004 aaPredicted RBP24.11■■□□□ 1.45
HMGN1-207ENST00000436324 RUNDC1Q96C34 613 aa24.1■■□□□ 1.45
HMGN1-207ENST00000436324 SERPINB2P05120 415 aa24.09■■□□□ 1.45
HMGN1-207ENST00000436324 ZNF784Q8NCA9 323 aaPredicted RBP24.09■■□□□ 1.45
HMGN1-207ENST00000436324 BCS1LQ9Y276 419 aa24.09■■□□□ 1.45
HMGN1-207ENST00000436324 EIF4A1P60842 406 aaKnown RBP24.08■■□□□ 1.45
HMGN1-207ENST00000436324 TBC1D9BQ66K14 1250 aa24.08■■□□□ 1.45
HMGN1-207ENST00000436324 DZIP3Q86Y13 1208 aaKnown RBP24.08■■□□□ 1.45
HMGN1-207ENST00000436324 CHD4Q14839 1912 aa24.08■■□□□ 1.44
HMGN1-207ENST00000436324 N4BP2Q86UW6 1770 aaPredicted RBP24.07■■□□□ 1.44
HMGN1-207ENST00000436324 LMOD3Q0VAK6 560 aa24.07■■□□□ 1.44
HMGN1-207ENST00000436324 TSPYL4Q9UJ04 414 aa24.07■■□□□ 1.44
HMGN1-207ENST00000436324 KIF13BQ9NQT8 1826 aa24.06■■□□□ 1.44
HMGN1-207ENST00000436324 NBPF26B4DH59 902 aa24.06■■□□□ 1.44
HMGN1-207ENST00000436324 CAMTA2O94983 1202 aa24.06■■□□□ 1.44
HMGN1-207ENST00000436324 CHRNA5P30532 468 aa24.06■■□□□ 1.44
HMGN1-207ENST00000436324 NBPF10Q6P3W6 841 aaKnown RBP24.06■■□□□ 1.44
HMGN1-207ENST00000436324 NBPF15Q8N660 670 aa24.06■■□□□ 1.44
HMGN1-207ENST00000436324 GIGYF1O75420 1035 aaPredicted RBP24.05■■□□□ 1.44
HMGN1-207ENST00000436324 KCNA3P22001 575 aa24.05■■□□□ 1.44
HMGN1-207ENST00000436324 NGEFQ8N5V2 710 aa24.04■■□□□ 1.44
HMGN1-207ENST00000436324 KIAA1551Q9HCM1 1747 aa24.04■■□□□ 1.44
HMGN1-207ENST00000436324 PIM2Q9P1W9 311 aa24.03■■□□□ 1.44
HMGN1-207ENST00000436324 CCDC24Q8N4L8 307 aa24.02■■□□□ 1.44
HMGN1-207ENST00000436324 LAS1LQ9Y4W2 734 aaKnown RBP24.02■■□□□ 1.44
HMGN1-207ENST00000436324 KDM3BQ7LBC6 1761 aa24.01■■□□□ 1.43
HMGN1-207ENST00000436324 CCDC184Q52MB2 194 aa24.01■■□□□ 1.43
HMGN1-207ENST00000436324 SETDB2Q96T68 719 aa24.01■■□□□ 1.43
HMGN1-207ENST00000436324 TRIM35Q9UPQ4 493 aa24.01■■□□□ 1.43
HMGN1-207ENST00000436324 ARHGAP27Q6ZUM4 889 aa24■■□□□ 1.43
HMGN1-207ENST00000436324 DALRD3Q5D0E6 543 aaKnown RBP23.99■■□□□ 1.43
HMGN1-207ENST00000436324 UTRNP46939 3433 aa23.99■■□□□ 1.43
HMGN1-207ENST00000436324 SCN7AQ01118 1682 aa23.99■■□□□ 1.43
HMGN1-207ENST00000436324 NPHP1O15259 732 aa23.98■■□□□ 1.43
HMGN1-207ENST00000436324 MYL6BP14649 208 aa23.98■■□□□ 1.43
HMGN1-207ENST00000436324 CARMIL3Q8ND23 1372 aa23.98■■□□□ 1.43
HMGN1-207ENST00000436324 AFDNP55196 1824 aaKnown RBP23.98■■□□□ 1.43
HMGN1-207ENST00000436324 APAF1O14727 1248 aa23.97■■□□□ 1.43
HMGN1-207ENST00000436324 EIF2S2P20042 333 aaKnown RBP23.97■■□□□ 1.43
HMGN1-207ENST00000436324 C2CD5Q86YS7 1000 aa23.97■■□□□ 1.43
HMGN1-207ENST00000436324 ZNF652Q9Y2D9 606 aa23.97■■□□□ 1.43
HMGN1-207ENST00000436324 PRR5LQ6MZQ0 368 aa23.96■■□□□ 1.43
HMGN1-207ENST00000436324 BABAM1Q9NWV8 329 aa23.96■■□□□ 1.43
HMGN1-207ENST00000436324 ANP32CO43423 234 aa23.95■■□□□ 1.42
HMGN1-207ENST00000436324 HLFQ16534 295 aa23.95■■□□□ 1.42
HMGN1-207ENST00000436324 CLEC4GQ6UXB4 293 aa23.95■■□□□ 1.42
HMGN1-207ENST00000436324 NRXN2Q9P2S2 1712 aa23.95■■□□□ 1.42
HMGN1-207ENST00000436324 H0YIN7 160 aa23.94■■□□□ 1.42
HMGN1-207ENST00000436324 CNBD1Q8NA66 436 aa23.94■■□□□ 1.42
HMGN1-207ENST00000436324 NECTIN2Q92692 538 aa23.94■■□□□ 1.42
HMGN1-207ENST00000436324 LAMB4A4D0S4 1761 aa23.93■■□□□ 1.42
HMGN1-207ENST00000436324 FAM177BA6PVY3 158 aa23.93■■□□□ 1.42
HMGN1-207ENST00000436324 CHL1O00533 1208 aa23.93■■□□□ 1.42
HMGN1-207ENST00000436324 KRT24Q2M2I5 525 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms