RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 KIF16BQ96L93 1317 aa12.62□□□□□ -0.39
AC004448.3-201ENST00000435953 NBPF26B4DH59 902 aa12.61□□□□□ -0.39
AC004448.3-201ENST00000435953 PLSCR1O15162 318 aa12.61□□□□□ -0.39
AC004448.3-201ENST00000435953 ANXA1P04083 346 aa12.61□□□□□ -0.39
AC004448.3-201ENST00000435953 MS4A1P11836 297 aa12.61□□□□□ -0.39
AC004448.3-201ENST00000435953 PDE3AQ14432 1141 aa12.61□□□□□ -0.39
AC004448.3-201ENST00000435953 NBPF14Q5TI25 921 aa12.61□□□□□ -0.39
AC004448.3-201ENST00000435953 NBPF10Q6P3W6 841 aaKnown RBP12.61□□□□□ -0.39
AC004448.3-201ENST00000435953 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
AC004448.3-201ENST00000435953 NBPF15Q8N660 670 aa12.61□□□□□ -0.39
AC004448.3-201ENST00000435953 API5Q9BZZ5 524 aaKnown RBP12.61□□□□□ -0.39
AC004448.3-201ENST00000435953 PHAXQ9H814 394 aaKnown RBP12.61□□□□□ -0.39
AC004448.3-201ENST00000435953 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
AC004448.3-201ENST00000435953 MYL6BP14649 208 aa12.6□□□□□ -0.39
AC004448.3-201ENST00000435953 KCNQ4P56696 695 aa12.6□□□□□ -0.39
AC004448.3-201ENST00000435953 FLIIQ13045 1269 aa12.6□□□□□ -0.39
AC004448.3-201ENST00000435953 C20orf194Q5TEA3 1177 aa12.6□□□□□ -0.39
AC004448.3-201ENST00000435953 LRP10Q7Z4F1 713 aa12.6□□□□□ -0.39
AC004448.3-201ENST00000435953 PROM2Q8N271 834 aa12.6□□□□□ -0.39
AC004448.3-201ENST00000435953 CCNL1Q9UK58 526 aaPredicted RBP12.6□□□□□ -0.39
AC004448.3-201ENST00000435953 PTPRCP08575 1304 aa12.6□□□□□ -0.39
AC004448.3-201ENST00000435953 KDM3BQ7LBC6 1761 aa12.59□□□□□ -0.39
AC004448.3-201ENST00000435953 TRIM27P14373 513 aa12.59□□□□□ -0.39
AC004448.3-201ENST00000435953 PIP4K2AP48426 406 aaPredicted RBP12.59□□□□□ -0.39
AC004448.3-201ENST00000435953 SLC27A3Q5K4L6 730 aa12.59□□□□□ -0.39
AC004448.3-201ENST00000435953 RC3H1Q5TC82 1133 aaKnown RBP12.59□□□□□ -0.39
AC004448.3-201ENST00000435953 INTS5Q6P9B9 1019 aaKnown RBP12.59□□□□□ -0.39
AC004448.3-201ENST00000435953 COPS6Q7L5N1 327 aa12.59□□□□□ -0.39
AC004448.3-201ENST00000435953 DZIP1LQ8IYY4 767 aaKnown RBP12.59□□□□□ -0.39
AC004448.3-201ENST00000435953 TNNQ9UQP3 1299 aa12.59□□□□□ -0.39
AC004448.3-201ENST00000435953 NEFLP07196 543 aa12.58□□□□□ -0.4
AC004448.3-201ENST00000435953 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.4
AC004448.3-201ENST00000435953 CRKLP46109 303 aaKnown RBP12.58□□□□□ -0.4
AC004448.3-201ENST00000435953 IRX6P78412 446 aaPredicted RBP12.58□□□□□ -0.4
AC004448.3-201ENST00000435953 AIMP1Q12904 312 aaKnown RBP12.58□□□□□ -0.4
AC004448.3-201ENST00000435953 FKBP5Q13451 457 aaPredicted RBP12.58□□□□□ -0.4
AC004448.3-201ENST00000435953 TXNRD1Q16881 649 aa12.58□□□□□ -0.4
AC004448.3-201ENST00000435953 LINC00116Q8NCU8 138 aa12.58□□□□□ -0.4
AC004448.3-201ENST00000435953 PANK1Q8TE04 598 aa12.58□□□□□ -0.4
AC004448.3-201ENST00000435953 XAGE3Q8WTP9 111 aa12.58□□□□□ -0.4
AC004448.3-201ENST00000435953 CLUAP1Q96AJ1 413 aa12.58□□□□□ -0.4
AC004448.3-201ENST00000435953 LRRC4BQ9NT99 713 aa12.58□□□□□ -0.4
AC004448.3-201ENST00000435953 CCDC87Q9NVE4 849 aa12.58□□□□□ -0.4
AC004448.3-201ENST00000435953 RLBP1P12271 317 aa12.57□□□□□ -0.4
AC004448.3-201ENST00000435953 IL6STP40189 918 aaPredicted RBP12.57□□□□□ -0.4
AC004448.3-201ENST00000435953 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
AC004448.3-201ENST00000435953 ZBTB1Q9Y2K1 713 aa12.57□□□□□ -0.4
AC004448.3-201ENST00000435953 EP400Q96L91 3159 aa12.57□□□□□ -0.4
AC004448.3-201ENST00000435953 DOT1LQ8TEK3 1739 aa12.57□□□□□ -0.4
AC004448.3-201ENST00000435953 PI4KAP2A4QPH2 592 aa12.56□□□□□ -0.4
AC004448.3-201ENST00000435953 DDX58O95786 925 aaKnown RBP12.56□□□□□ -0.4
AC004448.3-201ENST00000435953 EIF5P55010 431 aaKnown RBP12.56□□□□□ -0.4
AC004448.3-201ENST00000435953 FKBP8Q14318 412 aa12.56□□□□□ -0.4
AC004448.3-201ENST00000435953 KSR2Q6VAB6 950 aa12.56□□□□□ -0.4
AC004448.3-201ENST00000435953 CCDC125Q86Z20 511 aa12.56□□□□□ -0.4
AC004448.3-201ENST00000435953 FTSJ3Q8IY81 847 aaKnown RBP12.56□□□□□ -0.4
AC004448.3-201ENST00000435953 PI4KAP1Q8N8J0 262 aa12.56□□□□□ -0.4
AC004448.3-201ENST00000435953 ITGB4P16144 1822 aa12.55□□□□□ -0.4
AC004448.3-201ENST00000435953 BRWD3Q6RI45 1802 aa12.55□□□□□ -0.4
AC004448.3-201ENST00000435953 F6X3S4 739 aa12.55□□□□□ -0.4
AC004448.3-201ENST00000435953 SF3B2Q13435 895 aaKnown RBP12.55□□□□□ -0.4
AC004448.3-201ENST00000435953 TTLL7Q6ZT98 887 aa12.55□□□□□ -0.4
AC004448.3-201ENST00000435953 NPM2Q86SE8 214 aaKnown RBP12.55□□□□□ -0.4
AC004448.3-201ENST00000435953 TMEM57Q8N5G2 664 aa12.55□□□□□ -0.4
AC004448.3-201ENST00000435953 CNTNAP4Q9C0A0 1308 aa12.55□□□□□ -0.4
AC004448.3-201ENST00000435953 PAPPAQ13219 1627 aa12.55□□□□□ -0.4
AC004448.3-201ENST00000435953 KAT6BQ8WYB5 2073 aa12.54□□□□□ -0.4
AC004448.3-201ENST00000435953 RPS6KA4O75676 772 aa12.54□□□□□ -0.4
AC004448.3-201ENST00000435953 INTS3Q68E01 1043 aaKnown RBP12.54□□□□□ -0.4
AC004448.3-201ENST00000435953 RIC3Q7Z5B4 369 aa12.54□□□□□ -0.4
AC004448.3-201ENST00000435953 PLBD2Q8NHP8 589 aa12.54□□□□□ -0.4
AC004448.3-201ENST00000435953 CAMKK2Q96RR4 588 aa12.54□□□□□ -0.4
AC004448.3-201ENST00000435953 CRBNQ96SW2 442 aa12.54□□□□□ -0.4
AC004448.3-201ENST00000435953 MAP3K2Q9Y2U5 619 aa12.54□□□□□ -0.4
AC004448.3-201ENST00000435953 COG6Q9Y2V7 657 aa12.54□□□□□ -0.4
AC004448.3-201ENST00000435953 ABCC4O15439 1325 aa12.54□□□□□ -0.4
AC004448.3-201ENST00000435953 NHSQ6T4R5 1651 aa12.54□□□□□ -0.4
AC004448.3-201ENST00000435953 CCT4P50991 539 aaKnown RBP12.53□□□□□ -0.4
AC004448.3-201ENST00000435953 EN1Q05925 392 aaPredicted RBP12.53□□□□□ -0.4
AC004448.3-201ENST00000435953 ERICH6BQ5W0A0 696 aa12.53□□□□□ -0.4
AC004448.3-201ENST00000435953 SLC4A10Q6U841 1118 aa12.53□□□□□ -0.4
AC004448.3-201ENST00000435953 EXOC6Q8TAG9 804 aa12.53□□□□□ -0.4
AC004448.3-201ENST00000435953 DNAAF4Q8WXU2 420 aa12.53□□□□□ -0.4
AC004448.3-201ENST00000435953 ARXQ96QS3 562 aa12.53□□□□□ -0.4
AC004448.3-201ENST00000435953 ZNF330Q9Y3S2 320 aaPredicted RBP12.53□□□□□ -0.4
AC004448.3-201ENST00000435953 A0A087WZG4 1122 aa12.52□□□□□ -0.41
AC004448.3-201ENST00000435953 BAG6P46379 1132 aa12.52□□□□□ -0.41
AC004448.3-201ENST00000435953 MVPQ14764 893 aaKnown RBP12.52□□□□□ -0.41
AC004448.3-201ENST00000435953 EZH2Q15910 746 aaKnown RBP12.52□□□□□ -0.41
AC004448.3-201ENST00000435953 BEND3Q5T5X7 828 aa12.52□□□□□ -0.41
AC004448.3-201ENST00000435953 METTL22Q9BUU2 404 aaPredicted RBP12.52□□□□□ -0.41
AC004448.3-201ENST00000435953 TBC1D2BQ9UPU7 963 aa12.52□□□□□ -0.41
AC004448.3-201ENST00000435953 RTCBQ9Y3I0 505 aaKnown RBP12.52□□□□□ -0.41
AC004448.3-201ENST00000435953 GTF3C3Q9Y5Q9 886 aa12.52□□□□□ -0.41
AC004448.3-201ENST00000435953 VIRMAQ69YN4 1812 aaKnown RBP12.52□□□□□ -0.41
AC004448.3-201ENST00000435953 UBR2Q8IWV8 1755 aa12.51□□□□□ -0.41
AC004448.3-201ENST00000435953 ERVV-1B6SEH8 477 aa12.51□□□□□ -0.41
AC004448.3-201ENST00000435953 ZBTB7BO15156 539 aaPredicted RBP12.51□□□□□ -0.41
AC004448.3-201ENST00000435953 GNPATO15228 680 aa12.51□□□□□ -0.41
AC004448.3-201ENST00000435953 KIF6Q6ZMV9 814 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms