RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 DISP3Q9P2K9 1392 aa18.44■□□□□ 0.54
NEDD4-202ENST00000435532 MX1P20591 662 aa18.44■□□□□ 0.54
NEDD4-202ENST00000435532 ZGPATQ8N5A5 531 aaKnown RBP18.44■□□□□ 0.54
NEDD4-202ENST00000435532 UQCRFS1P1P0C7P4 283 aa18.43■□□□□ 0.54
NEDD4-202ENST00000435532 PDIA4P13667 645 aaKnown RBP18.43■□□□□ 0.54
NEDD4-202ENST00000435532 STK3Q13188 491 aa18.43■□□□□ 0.54
NEDD4-202ENST00000435532 ANKRD13DQ6ZTN6 518 aa18.43■□□□□ 0.54
NEDD4-202ENST00000435532 BTG4Q9NY30 223 aa18.43■□□□□ 0.54
NEDD4-202ENST00000435532 NPATQ14207 1427 aa18.43■□□□□ 0.54
NEDD4-202ENST00000435532 CCDC196A0A1B0GTZ2 297 aa18.43■□□□□ 0.54
NEDD4-202ENST00000435532 CCAR2Q8N163 923 aaKnown RBP18.43■□□□□ 0.54
NEDD4-202ENST00000435532 DACH1Q9UI36 760 aa18.43■□□□□ 0.54
NEDD4-202ENST00000435532 EXOC6BQ9Y2D4 811 aa18.43■□□□□ 0.54
NEDD4-202ENST00000435532 DNAI2Q9GZS0 605 aa18.42■□□□□ 0.54
NEDD4-202ENST00000435532 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
NEDD4-202ENST00000435532 GCP02774 474 aa18.42■□□□□ 0.54
NEDD4-202ENST00000435532 TRIM21P19474 475 aaKnown RBP18.42■□□□□ 0.54
NEDD4-202ENST00000435532 CCDC96Q2M329 555 aa18.42■□□□□ 0.54
NEDD4-202ENST00000435532 ZFYVE27Q5T4F4 411 aa18.42■□□□□ 0.54
NEDD4-202ENST00000435532 IQCA1Q86XH1 822 aa18.42■□□□□ 0.54
NEDD4-202ENST00000435532 UTP14AQ9BVJ6 771 aaKnown RBP18.42■□□□□ 0.54
NEDD4-202ENST00000435532 C11orf95C9JLR9 678 aaPredicted RBP18.42■□□□□ 0.54
NEDD4-202ENST00000435532 MPHOSPH6Q99547 160 aaKnown RBP18.42■□□□□ 0.54
NEDD4-202ENST00000435532 RTN4Q9NQC3 1192 aaKnown RBP18.42■□□□□ 0.54
NEDD4-202ENST00000435532 NKTRP30414 1462 aaKnown RBP18.42■□□□□ 0.54
NEDD4-202ENST00000435532 JAKMIP1Q96N16 626 aaKnown RBP18.41■□□□□ 0.54
NEDD4-202ENST00000435532 ZHX3Q9H4I2 956 aa18.41■□□□□ 0.54
NEDD4-202ENST00000435532 TSHZ2Q9NRE2 1034 aa18.41■□□□□ 0.54
NEDD4-202ENST00000435532 HSP90AB2PQ58FF8 381 aa18.41■□□□□ 0.54
NEDD4-202ENST00000435532 PPP4R3AQ6IN85 833 aa18.41■□□□□ 0.54
NEDD4-202ENST00000435532 TPTE2Q6XPS3 522 aa18.41■□□□□ 0.54
NEDD4-202ENST00000435532 SSH1Q8WYL5 1049 aa18.41■□□□□ 0.54
NEDD4-202ENST00000435532 LRRFIP2Q9Y608 721 aaKnown RBP18.41■□□□□ 0.54
NEDD4-202ENST00000435532 DCAF5Q96JK2 942 aa18.41■□□□□ 0.54
NEDD4-202ENST00000435532 FEZ1Q99689 392 aa18.41■□□□□ 0.54
NEDD4-202ENST00000435532 CEP131Q9UPN4 1083 aa18.41■□□□□ 0.54
NEDD4-202ENST00000435532 YTHDC2Q9H6S0 1430 aaKnown RBP18.4■□□□□ 0.54
NEDD4-202ENST00000435532 PPP4R3BQ5MIZ7 849 aa18.4■□□□□ 0.54
NEDD4-202ENST00000435532 DISP1Q96F81 1524 aa18.4■□□□□ 0.54
NEDD4-202ENST00000435532 CTCFLQ8NI51 663 aaPredicted RBP18.4■□□□□ 0.54
NEDD4-202ENST00000435532 NF2P35240 595 aa18.4■□□□□ 0.54
NEDD4-202ENST00000435532 WDR78Q5VTH9 848 aa18.4■□□□□ 0.54
NEDD4-202ENST00000435532 BOLA2Q9H3K6 86 aa18.39■□□□□ 0.54
NEDD4-202ENST00000435532 ATP5J2-PTCD1G3V325 749 aa18.39■□□□□ 0.53
NEDD4-202ENST00000435532 SIRT1Q96EB6 747 aa18.39■□□□□ 0.53
NEDD4-202ENST00000435532 NIP7Q9Y221 180 aaKnown RBP eCLIP18.39■□□□□ 0.53
NEDD4-202ENST00000435532 OGFOD1Q8N543 542 aa18.39■□□□□ 0.53
NEDD4-202ENST00000435532 CLEC11AQ9Y240 323 aa18.39■□□□□ 0.53
NEDD4-202ENST00000435532 F6X3S4 739 aa18.39■□□□□ 0.53
NEDD4-202ENST00000435532 HMGB1P09429 215 aaKnown RBP18.39■□□□□ 0.53
NEDD4-202ENST00000435532 PAF1Q8N7H5 531 aa18.39■□□□□ 0.53
NEDD4-202ENST00000435532 RARSP54136 660 aaKnown RBP18.38■□□□□ 0.53
NEDD4-202ENST00000435532 MBD3O95983 291 aa18.38■□□□□ 0.53
NEDD4-202ENST00000435532 ZNF804AQ7Z570 1209 aa18.38■□□□□ 0.53
NEDD4-202ENST00000435532 HOMER1Q86YM7 354 aa18.38■□□□□ 0.53
NEDD4-202ENST00000435532 SMARCE1Q969G3 411 aa18.38■□□□□ 0.53
NEDD4-202ENST00000435532 CCDC173Q0VFZ6 552 aa18.38■□□□□ 0.53
NEDD4-202ENST00000435532 PRAG1Q86YV5 1406 aa18.38■□□□□ 0.53
NEDD4-202ENST00000435532 MATR3P43243 847 aaKnown RBP eCLIP18.38■□□□□ 0.538e-6■■■□□ 17.4
NEDD4-202ENST00000435532 UBE3BQ7Z3V4 1068 aa18.38■□□□□ 0.53
NEDD4-202ENST00000435532 DZIP3Q86Y13 1208 aaKnown RBP18.38■□□□□ 0.53
NEDD4-202ENST00000435532 ASXL1Q8IXJ9 1541 aa18.38■□□□□ 0.53
NEDD4-202ENST00000435532 MAST1Q9Y2H9 1570 aa18.38■□□□□ 0.53
NEDD4-202ENST00000435532 IP6K1Q92551 441 aa18.38■□□□□ 0.53
NEDD4-202ENST00000435532 ZFYVE9O95405 1425 aa18.38■□□□□ 0.53
NEDD4-202ENST00000435532 JDP2Q8WYK2 163 aa18.37■□□□□ 0.53
NEDD4-202ENST00000435532 EYA3Q99504 573 aa18.37■□□□□ 0.53
NEDD4-202ENST00000435532 MBIPQ9NS73 344 aa18.37■□□□□ 0.53
NEDD4-202ENST00000435532 TRAPPC3LQ5T215 181 aa18.37■□□□□ 0.53
NEDD4-202ENST00000435532 WDR33Q9C0J8 1336 aaKnown RBP18.37■□□□□ 0.53
NEDD4-202ENST00000435532 PDE4BQ07343 736 aa18.37■□□□□ 0.53
NEDD4-202ENST00000435532 RANBP6O60518 1105 aaKnown RBP18.36■□□□□ 0.53
NEDD4-202ENST00000435532 CFAP43Q8NDM7 1665 aa18.36■□□□□ 0.53
NEDD4-202ENST00000435532 ZNF213O14771 459 aa18.36■□□□□ 0.53
NEDD4-202ENST00000435532 GPS2Q13227 327 aa18.36■□□□□ 0.53
NEDD4-202ENST00000435532 PDCL3Q9H2J4 239 aa18.36■□□□□ 0.53
NEDD4-202ENST00000435532 CRNKL1Q9BZJ0 848 aaKnown RBP18.36■□□□□ 0.53
NEDD4-202ENST00000435532 PI4KAP2A4QPH2 592 aa18.36■□□□□ 0.53
NEDD4-202ENST00000435532 EIF4A2Q14240 407 aaKnown RBP18.36■□□□□ 0.53
NEDD4-202ENST00000435532 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
NEDD4-202ENST00000435532 PI4KAP1Q8N8J0 262 aa18.36■□□□□ 0.53
NEDD4-202ENST00000435532 CCDC8Q9H0W5 538 aaPredicted RBP18.36■□□□□ 0.53
NEDD4-202ENST00000435532 SCLT1Q96NL6 688 aa18.35■□□□□ 0.53
NEDD4-202ENST00000435532 SSBP05455 408 aaKnown RBP eCLIP18.35■□□□□ 0.53
NEDD4-202ENST00000435532 XAGE3Q8WTP9 111 aa18.35■□□□□ 0.53
NEDD4-202ENST00000435532 SLAIN2Q9P270 581 aa18.35■□□□□ 0.53
NEDD4-202ENST00000435532 PDILTQ8N807 584 aa18.34■□□□□ 0.53
NEDD4-202ENST00000435532 USP21Q9UK80 565 aa18.34■□□□□ 0.53
NEDD4-202ENST00000435532 LMOD1P29536 600 aaPredicted RBP18.34■□□□□ 0.53
NEDD4-202ENST00000435532 RBM17Q96I25 401 aaKnown RBP18.34■□□□□ 0.53
NEDD4-202ENST00000435532 ALDH1L1O75891 902 aa18.34■□□□□ 0.53
NEDD4-202ENST00000435532 DESP17661 470 aa18.34■□□□□ 0.53
NEDD4-202ENST00000435532 CCDC178Q5BJE1 867 aa18.34■□□□□ 0.53
NEDD4-202ENST00000435532 EVI5LQ96CN4 794 aa18.34■□□□□ 0.53
NEDD4-202ENST00000435532 ME1P48163 572 aa18.33■□□□□ 0.53
NEDD4-202ENST00000435532 KRT85P78386 507 aa18.33■□□□□ 0.53
NEDD4-202ENST00000435532 CEBPZQ03701 1054 aaKnown RBP18.33■□□□□ 0.53
NEDD4-202ENST00000435532 PIBF1Q8WXW3 757 aa18.33■□□□□ 0.53
NEDD4-202ENST00000435532 CFAP45Q9UL16 551 aa18.33■□□□□ 0.53
NEDD4-202ENST00000435532 MAP3K5Q99683 1374 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms