RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 COL15A1P39059 1388 aa20.38■□□□□ 0.85
CSNK1E-208ENST00000431611 GAS2L2Q8NHY3 880 aa20.38■□□□□ 0.85
CSNK1E-208ENST00000431611 COL3A1P02461 1466 aaPredicted RBP20.37■□□□□ 0.85
CSNK1E-208ENST00000431611 GNAT3A8MTJ3 354 aa20.37■□□□□ 0.85
CSNK1E-208ENST00000431611 STARD3NLO95772 234 aa20.37■□□□□ 0.85
CSNK1E-208ENST00000431611 CANXP27824 592 aaKnown RBP20.37■□□□□ 0.85
CSNK1E-208ENST00000431611 TEFQ10587 303 aa20.37■□□□□ 0.85
CSNK1E-208ENST00000431611 NFIXQ14938 502 aa20.37■□□□□ 0.85
CSNK1E-208ENST00000431611 C9orf131Q5VYM1 1079 aa20.37■□□□□ 0.85
CSNK1E-208ENST00000431611 ADAMTS7Q9UKP4 1686 aa20.36■□□□□ 0.85
CSNK1E-208ENST00000431611 IL17REQ8NFR9 667 aa20.36■□□□□ 0.85
CSNK1E-208ENST00000431611 BCL2L12Q9HB09 334 aa20.35■□□□□ 0.85
CSNK1E-208ENST00000431611 ZNF790Q6PG37 636 aa20.34■□□□□ 0.85
CSNK1E-208ENST00000431611 ZNF496Q96IT1 587 aaPredicted RBP20.34■□□□□ 0.85
CSNK1E-208ENST00000431611 TOMM70O94826 608 aa20.33■□□□□ 0.85
CSNK1E-208ENST00000431611 SERPINB2P05120 415 aa20.33■□□□□ 0.85
CSNK1E-208ENST00000431611 CFAP53Q96M91 514 aa20.33■□□□□ 0.85
CSNK1E-208ENST00000431611 A0A087WZG4 1122 aa20.32■□□□□ 0.84
CSNK1E-208ENST00000431611 EIF5P55010 431 aaKnown RBP20.32■□□□□ 0.84
CSNK1E-208ENST00000431611 TEX13AQ9BXU3 409 aaPredicted RBP20.32■□□□□ 0.84
CSNK1E-208ENST00000431611 NMRK2Q9NPI5 230 aa20.32■□□□□ 0.84
CSNK1E-208ENST00000431611 HEG1Q9ULI3 1381 aa20.32■□□□□ 0.84
CSNK1E-208ENST00000431611 BRCA1P38398 1863 aaKnown RBP20.31■□□□□ 0.84
CSNK1E-208ENST00000431611 RNF181Q9P0P0 153 aa20.31■□□□□ 0.84
CSNK1E-208ENST00000431611 PRKAR2BP31323 418 aa20.3■□□□□ 0.84
CSNK1E-208ENST00000431611 PHACTR3Q96KR7 559 aa20.3■□□□□ 0.84
CSNK1E-208ENST00000431611 BICDL1Q6ZP65 573 aa20.29■□□□□ 0.84
CSNK1E-208ENST00000431611 FMNL2Q96PY5 1086 aa20.29■□□□□ 0.84
CSNK1E-208ENST00000431611 RSPH6AQ9H0K4 717 aa20.29■□□□□ 0.84
CSNK1E-208ENST00000431611 NUDCQ9Y266 331 aa20.29■□□□□ 0.84
CSNK1E-208ENST00000431611 CEP350Q5VT06 3117 aa20.28■□□□□ 0.84
CSNK1E-208ENST00000431611 ZNF330Q9Y3S2 320 aaPredicted RBP20.28■□□□□ 0.84
CSNK1E-208ENST00000431611 UBR2Q8IWV8 1755 aa20.28■□□□□ 0.84
CSNK1E-208ENST00000431611 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.84
CSNK1E-208ENST00000431611 ARFGEF1Q9Y6D6 1849 aa20.27■□□□□ 0.84
CSNK1E-208ENST00000431611 CEMIPQ8WUJ3 1361 aa20.27■□□□□ 0.84
CSNK1E-208ENST00000431611 IL6STP40189 918 aaPredicted RBP20.27■□□□□ 0.84
CSNK1E-208ENST00000431611 C2CD5Q86YS7 1000 aa20.27■□□□□ 0.84
CSNK1E-208ENST00000431611 BTBD11A6QL63 1104 aa20.26■□□□□ 0.83
CSNK1E-208ENST00000431611 H0YIN7 160 aa20.26■□□□□ 0.83
CSNK1E-208ENST00000431611 APLP1P51693 650 aa20.26■□□□□ 0.83
CSNK1E-208ENST00000431611 TBC1D9BQ66K14 1250 aa20.26■□□□□ 0.83
CSNK1E-208ENST00000431611 NPM2Q86SE8 214 aaKnown RBP20.26■□□□□ 0.83
CSNK1E-208ENST00000431611 C16orf71Q8IYS4 520 aaPredicted RBP20.26■□□□□ 0.83
CSNK1E-208ENST00000431611 TTLL6Q8N841 843 aa20.26■□□□□ 0.83
CSNK1E-208ENST00000431611 TBC1D2BQ9UPU7 963 aa20.26■□□□□ 0.83
CSNK1E-208ENST00000431611 VIRMAQ69YN4 1812 aaKnown RBP20.25■□□□□ 0.83
CSNK1E-208ENST00000431611 KCNQ3O43525 872 aa20.25■□□□□ 0.83
CSNK1E-208ENST00000431611 A1BGP04217 495 aa20.25■□□□□ 0.83
CSNK1E-208ENST00000431611 U2AF1L5P0DN76 240 aaPredicted RBP20.25■□□□□ 0.83
CSNK1E-208ENST00000431611 PPP2R1AP30153 589 aa20.25■□□□□ 0.83
CSNK1E-208ENST00000431611 U2AF1Q01081 240 aaKnown RBP eCLIP20.25■□□□□ 0.83
CSNK1E-208ENST00000431611 CARMIL3Q8ND23 1372 aa20.24■□□□□ 0.83
CSNK1E-208ENST00000431611 RASSF7Q02833 373 aa20.24■□□□□ 0.83
CSNK1E-208ENST00000431611 RBM46Q8TBY0 533 aaKnown RBP20.24■□□□□ 0.83
CSNK1E-208ENST00000431611 NRXN2Q9P2S2 1712 aa20.24■□□□□ 0.83
CSNK1E-208ENST00000431611 RTF1Q92541 710 aaKnown RBP20.23■□□□□ 0.83
CSNK1E-208ENST00000431611 LMNB1P20700 586 aa20.22■□□□□ 0.83
CSNK1E-208ENST00000431611 BRIP1Q9BX63 1249 aa20.22■□□□□ 0.83
CSNK1E-208ENST00000431611 RRAGCQ9HB90 399 aa20.22■□□□□ 0.83
CSNK1E-208ENST00000431611 AFDNP55196 1824 aaKnown RBP20.21■□□□□ 0.83
CSNK1E-208ENST00000431611 PDE6BP35913 854 aa20.21■□□□□ 0.83
CSNK1E-208ENST00000431611 PRR5LQ6MZQ0 368 aa20.21■□□□□ 0.83
CSNK1E-208ENST00000431611 PDZRN3Q9UPQ7 1066 aa20.21■□□□□ 0.83
CSNK1E-208ENST00000431611 ZC3H4Q9UPT8 1303 aaKnown RBP20.21■□□□□ 0.83
CSNK1E-208ENST00000431611 CAMTA2O94983 1202 aa20.2■□□□□ 0.82
CSNK1E-208ENST00000431611 MCM10Q7L590 875 aa20.2■□□□□ 0.82
CSNK1E-208ENST00000431611 CCDC24Q8N4L8 307 aa20.2■□□□□ 0.82
CSNK1E-208ENST00000431611 ZNF622Q969S3 477 aaKnown RBP eCLIP20.2■□□□□ 0.826e-8■■□□□ 13.4
CSNK1E-208ENST00000431611 SETDB2Q96T68 719 aa20.2■□□□□ 0.82
CSNK1E-208ENST00000431611 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
CSNK1E-208ENST00000431611 SIPA1L3O60292 1781 aaPredicted RBP20.19■□□□□ 0.82
CSNK1E-208ENST00000431611 FSTL1Q12841 308 aa20.19■□□□□ 0.82
CSNK1E-208ENST00000431611 DZIP3Q86Y13 1208 aaKnown RBP20.19■□□□□ 0.82
CSNK1E-208ENST00000431611 NFKBIEO00221 500 aa20.18■□□□□ 0.82
CSNK1E-208ENST00000431611 NPHP1O15259 732 aa20.18■□□□□ 0.82
CSNK1E-208ENST00000431611 SNRPA1P09661 255 aaKnown RBP20.18■□□□□ 0.82
CSNK1E-208ENST00000431611 PRELPP51888 382 aa20.18■□□□□ 0.82
CSNK1E-208ENST00000431611 PRAMEF22A3QJZ6 481 aa20.17■□□□□ 0.82
CSNK1E-208ENST00000431611 HTATSF1O43719 755 aaKnown RBP20.17■□□□□ 0.82
CSNK1E-208ENST00000431611 PIP4K2AP48426 406 aaPredicted RBP20.17■□□□□ 0.82
CSNK1E-208ENST00000431611 DCTN1Q14203 1278 aa20.17■□□□□ 0.82
CSNK1E-208ENST00000431611 IFFO2Q5TF58 517 aa20.17■□□□□ 0.82
CSNK1E-208ENST00000431611 DNAJC5GQ8N7S2 189 aa20.17■□□□□ 0.82
CSNK1E-208ENST00000431611 CNBD1Q8NA66 436 aa20.17■□□□□ 0.82
CSNK1E-208ENST00000431611 SCN7AQ01118 1682 aa20.16■□□□□ 0.82
CSNK1E-208ENST00000431611 GLTPD2A6NH11 291 aa20.15■□□□□ 0.82
CSNK1E-208ENST00000431611 C21orf2O43822 256 aa20.15■□□□□ 0.82
CSNK1E-208ENST00000431611 ST5P78524 1137 aa20.15■□□□□ 0.82
CSNK1E-208ENST00000431611 ZNF219Q9P2Y4 722 aaPredicted RBP20.15■□□□□ 0.82
CSNK1E-208ENST00000431611 DLEC1Q9Y238 1755 aa20.14■□□□□ 0.81
CSNK1E-208ENST00000431611 VEGFAP15692 232 aaPredicted RBP20.13■□□□□ 0.81
CSNK1E-208ENST00000431611 TAF7Q15545 349 aaPredicted RBP20.13■□□□□ 0.81
CSNK1E-208ENST00000431611 CLEC4GQ6UXB4 293 aa20.13■□□□□ 0.81
CSNK1E-208ENST00000431611 SMC1BQ8NDV3 1235 aa20.13■□□□□ 0.81
CSNK1E-208ENST00000431611 ZNF652Q9Y2D9 606 aa20.13■□□□□ 0.81
CSNK1E-208ENST00000431611 SBF1O95248 1867 aa20.13■□□□□ 0.81
CSNK1E-208ENST00000431611 NEFMP07197 916 aa20.12■□□□□ 0.81
CSNK1E-208ENST00000431611 STYK1Q6J9G0 422 aa20.12■□□□□ 0.81
CSNK1E-208ENST00000431611 CNKSR1Q969H4 720 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms