RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 SCN11AQ9UI33 1791 aa30.19■■■□□ 2.42
PTPRA-207ENST00000431048 LMNB1P20700 586 aa30.19■■■□□ 2.42
PTPRA-207ENST00000431048 NFIXQ14938 502 aa30.19■■■□□ 2.42
PTPRA-207ENST00000431048 GLTPD2A6NH11 291 aa30.18■■■□□ 2.42
PTPRA-207ENST00000431048 TRIM26Q12899 539 aaPredicted RBP30.18■■■□□ 2.42
PTPRA-207ENST00000431048 VEGFAP15692 232 aaPredicted RBP30.17■■■□□ 2.42
PTPRA-207ENST00000431048 LGR6Q9HBX8 967 aa30.17■■■□□ 2.42
PTPRA-207ENST00000431048 EIF4G2P78344 907 aaKnown RBP eCLIP30.16■■■□□ 2.42
PTPRA-207ENST00000431048 RASSF7Q02833 373 aa30.16■■■□□ 2.42
PTPRA-207ENST00000431048 SERPINB2P05120 415 aa30.15■■■□□ 2.42
PTPRA-207ENST00000431048 TTLL6Q8N841 843 aa30.15■■■□□ 2.42
PTPRA-207ENST00000431048 CLSPNQ9HAW4 1339 aa30.15■■■□□ 2.42
PTPRA-207ENST00000431048 PCNTO95613 3336 aa30.15■■■□□ 2.42
PTPRA-207ENST00000431048 NRXN2Q9P2S2 1712 aa30.14■■■□□ 2.42
PTPRA-207ENST00000431048 RNMTO43148 476 aaKnown RBP30.14■■■□□ 2.42
PTPRA-207ENST00000431048 PRELPP51888 382 aa30.14■■■□□ 2.42
PTPRA-207ENST00000431048 VSIG10Q8N0Z9 540 aa30.14■■■□□ 2.42
PTPRA-207ENST00000431048 BCL2L12Q9HB09 334 aa30.14■■■□□ 2.42
PTPRA-207ENST00000431048 COL15A1P39059 1388 aa30.13■■■□□ 2.41
PTPRA-207ENST00000431048 MRC1P22897 1456 aa30.12■■■□□ 2.41
PTPRA-207ENST00000431048 HSPA5P11021 654 aaKnown RBP30.12■■■□□ 2.41
PTPRA-207ENST00000431048 SLC39A6Q13433 755 aa30.12■■■□□ 2.41
PTPRA-207ENST00000431048 ZBTB1Q9Y2K1 713 aa30.12■■■□□ 2.41
PTPRA-207ENST00000431048 AFDNP55196 1824 aaKnown RBP30.11■■■□□ 2.41
PTPRA-207ENST00000431048 KNSTRNQ9Y448 316 aa30.1■■■□□ 2.41
PTPRA-207ENST00000431048 H0YIN7 160 aa30.09■■■□□ 2.41
PTPRA-207ENST00000431048 C2CD5Q86YS7 1000 aa30.09■■■□□ 2.41
PTPRA-207ENST00000431048 TNS4Q8IZW8 715 aa30.08■■■□□ 2.41
PTPRA-207ENST00000431048 NFKBIEO00221 500 aa30.07■■■□□ 2.4
PTPRA-207ENST00000431048 PDZRN3Q9UPQ7 1066 aa30.07■■■□□ 2.4
PTPRA-207ENST00000431048 DLEC1Q9Y238 1755 aa30.07■■■□□ 2.4
PTPRA-207ENST00000431048 A0A087WZG4 1122 aa30.04■■■□□ 2.4
PTPRA-207ENST00000431048 POTECB2RU33 542 aa30.04■■■□□ 2.4
PTPRA-207ENST00000431048 EIF5P55010 431 aaKnown RBP30.04■■■□□ 2.4
PTPRA-207ENST00000431048 MTHFSDQ2M296 383 aaKnown RBP30.03■■■□□ 2.4
PTPRA-207ENST00000431048 AMER1Q5JTC6 1135 aaPredicted RBP30.03■■■□□ 2.4
PTPRA-207ENST00000431048 DPY19L2Q6NUT2 758 aa30.03■■■□□ 2.4
PTPRA-207ENST00000431048 STARD3NLO95772 234 aa30.02■■■□□ 2.4
PTPRA-207ENST00000431048 CANXP27824 592 aaKnown RBP30.01■■■□□ 2.39
PTPRA-207ENST00000431048 CARMIL3Q8ND23 1372 aa30.01■■■□□ 2.39
PTPRA-207ENST00000431048 HMOX1P09601 288 aa30■■■□□ 2.39
PTPRA-207ENST00000431048 HSPA1AP0DMV8 641 aaKnown RBP30■■■□□ 2.39
PTPRA-207ENST00000431048 HSPA1BP0DMV9 641 aaKnown RBP30■■■□□ 2.39
PTPRA-207ENST00000431048 BRIP1Q9BX63 1249 aa30■■■□□ 2.39
PTPRA-207ENST00000431048 PDE6BP35913 854 aa29.99■■■□□ 2.39
PTPRA-207ENST00000431048 CAPN15O75808 1086 aa29.98■■■□□ 2.39
PTPRA-207ENST00000431048 BICDL1Q6ZP65 573 aa29.97■■■□□ 2.39
PTPRA-207ENST00000431048 TEX13AQ9BXU3 409 aaPredicted RBP29.97■■■□□ 2.39
PTPRA-207ENST00000431048 CCDC88AQ3V6T2 1871 aa29.97■■■□□ 2.39
PTPRA-207ENST00000431048 TBC1D9BQ66K14 1250 aa29.96■■■□□ 2.39
PTPRA-207ENST00000431048 TTC5Q8N0Z6 440 aa29.96■■■□□ 2.39
PTPRA-207ENST00000431048 ZNF622Q969S3 477 aaKnown RBP eCLIP29.96■■■□□ 2.39
PTPRA-207ENST00000431048 TIAM2Q8IVF5 1701 aa29.96■■■□□ 2.39
PTPRA-207ENST00000431048 UBR2Q8IWV8 1755 aa29.95■■■□□ 2.38
PTPRA-207ENST00000431048 LTBP3Q9NS15 1303 aa29.95■■■□□ 2.38
PTPRA-207ENST00000431048 ERFEQ4G0M1 354 aa29.94■■■□□ 2.38
PTPRA-207ENST00000431048 C21orf2O43822 256 aa29.93■■■□□ 2.38
PTPRA-207ENST00000431048 DIAPH1O60610 1272 aaKnown RBP29.93■■■□□ 2.38
PTPRA-207ENST00000431048 PRR5LQ6MZQ0 368 aa29.93■■■□□ 2.38
PTPRA-207ENST00000431048 VIRMAQ69YN4 1812 aaKnown RBP29.93■■■□□ 2.38
PTPRA-207ENST00000431048 IL6STP40189 918 aaPredicted RBP29.91■■■□□ 2.38
PTPRA-207ENST00000431048 ZNF496Q96IT1 587 aaPredicted RBP29.91■■■□□ 2.38
PTPRA-207ENST00000431048 CREBZFQ9NS37 354 aa29.91■■■□□ 2.38
PTPRA-207ENST00000431048 HEG1Q9ULI3 1381 aa29.9■■■□□ 2.38
PTPRA-207ENST00000431048 CHADLQ6NUI6 762 aa29.9■■■□□ 2.38
PTPRA-207ENST00000431048 ZNF790Q6PG37 636 aa29.9■■■□□ 2.38
PTPRA-207ENST00000431048 ANKRD31Q8N7Z5 1873 aa29.89■■■□□ 2.38
PTPRA-207ENST00000431048 DICER1Q9UPY3 1922 aaKnown RBP29.89■■■□□ 2.38
PTPRA-207ENST00000431048 CNKSR1Q969H4 720 aa29.89■■■□□ 2.38
PTPRA-207ENST00000431048 TBC1D2BQ9UPU7 963 aa29.89■■■□□ 2.38
PTPRA-207ENST00000431048 FER1L6Q2WGJ9 1857 aa29.89■■■□□ 2.37
PTPRA-207ENST00000431048 STYK1Q6J9G0 422 aa29.88■■■□□ 2.37
PTPRA-207ENST00000431048 IL17REQ8NFR9 667 aa29.88■■■□□ 2.37
PTPRA-207ENST00000431048 TAOK3Q9H2K8 898 aa29.88■■■□□ 2.37
PTPRA-207ENST00000431048 ZNF219Q9P2Y4 722 aaPredicted RBP29.87■■■□□ 2.37
PTPRA-207ENST00000431048 TEFQ10587 303 aa29.86■■■□□ 2.37
PTPRA-207ENST00000431048 SOGA3Q5TF21 947 aa29.86■■■□□ 2.37
PTPRA-207ENST00000431048 SETDB2Q96T68 719 aa29.86■■■□□ 2.37
PTPRA-207ENST00000431048 PCGF6Q9BYE7 350 aa29.86■■■□□ 2.37
PTPRA-207ENST00000431048 GNAT3A8MTJ3 354 aa29.85■■■□□ 2.37
PTPRA-207ENST00000431048 PER1O15534 1290 aaPredicted RBP29.85■■■□□ 2.37
PTPRA-207ENST00000431048 CAMTA2O94983 1202 aa29.84■■■□□ 2.37
PTPRA-207ENST00000431048 SRGNP10124 158 aa29.84■■■□□ 2.37
PTPRA-207ENST00000431048 CCDC24Q8N4L8 307 aa29.84■■■□□ 2.37
PTPRA-207ENST00000431048 GAS2L2Q8NHY3 880 aa29.84■■■□□ 2.37
PTPRA-207ENST00000431048 SCN7AQ01118 1682 aa29.84■■■□□ 2.37
PTPRA-207ENST00000431048 DDNO94850 711 aaPredicted RBP29.83■■■□□ 2.37
PTPRA-207ENST00000431048 CNBD1Q8NA66 436 aa29.83■■■□□ 2.37
PTPRA-207ENST00000431048 MASTLQ96GX5 879 aa29.83■■■□□ 2.37
PTPRA-207ENST00000431048 FMNL2Q96PY5 1086 aa29.83■■■□□ 2.37
PTPRA-207ENST00000431048 COL11A2P13942 1736 aaPredicted RBP29.82■■■□□ 2.36
PTPRA-207ENST00000431048 A1BGP04217 495 aa29.81■■■□□ 2.36
PTPRA-207ENST00000431048 ST5P78524 1137 aa29.81■■■□□ 2.36
PTPRA-207ENST00000431048 PRPF40BQ6NWY9 871 aaKnown RBP29.81■■■□□ 2.36
PTPRA-207ENST00000431048 NPM2Q86SE8 214 aaKnown RBP29.81■■■□□ 2.36
PTPRA-207ENST00000431048 ZNF330Q9Y3S2 320 aaPredicted RBP29.81■■■□□ 2.36
PTPRA-207ENST00000431048 IQCA1LA6NCM1 817 aa29.8■■■□□ 2.36
PTPRA-207ENST00000431048 MKRN1Q9UHC7 482 aaKnown RBP29.8■■■□□ 2.36
PTPRA-207ENST00000431048 POTEIP0CG38 1075 aa29.79■■■□□ 2.36
PTPRA-207ENST00000431048 POTEJP0CG39 1038 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms