RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 DNAJC10Q8IXB1 793 aa21.89■■□□□ 1.09
TTC28-202ENST00000431039 LGR6Q9HBX8 967 aa21.89■■□□□ 1.09
TTC28-202ENST00000431039 AFDNP55196 1824 aaKnown RBP21.89■■□□□ 1.09
TTC28-202ENST00000431039 INTS5Q6P9B9 1019 aaKnown RBP21.88■■□□□ 1.09
TTC28-202ENST00000431039 SLC52A2Q9HAB3 445 aa21.88■■□□□ 1.09
TTC28-202ENST00000431039 ADAMTS8Q9UP79 889 aa21.88■■□□□ 1.09
TTC28-202ENST00000431039 MRC1P22897 1456 aa21.88■■□□□ 1.09
TTC28-202ENST00000431039 KCNA3P22001 575 aa21.87■■□□□ 1.09
TTC28-202ENST00000431039 SLC39A6Q13433 755 aa21.87■■□□□ 1.09
TTC28-202ENST00000431039 U2AF1L5P0DN76 240 aaPredicted RBP21.86■■□□□ 1.09
TTC28-202ENST00000431039 U2AF1Q01081 240 aaKnown RBP eCLIP21.86■■□□□ 1.09
TTC28-202ENST00000431039 KCPQ6ZWJ8 1503 aa21.85■■□□□ 1.09
TTC28-202ENST00000431039 U2SURPO15042 1029 aaKnown RBP21.85■■□□□ 1.09
TTC28-202ENST00000431039 RNMTO43148 476 aaKnown RBP21.85■■□□□ 1.09
TTC28-202ENST00000431039 PIM2Q9P1W9 311 aa21.85■■□□□ 1.09
TTC28-202ENST00000431039 SBF1O95248 1867 aa21.85■■□□□ 1.09
TTC28-202ENST00000431039 UBR2Q8IWV8 1755 aa21.84■■□□□ 1.09
TTC28-202ENST00000431039 USPL1Q5W0Q7 1092 aa21.84■■□□□ 1.09
TTC28-202ENST00000431039 SOS1Q07889 1333 aaPredicted RBP21.83■■□□□ 1.09
TTC28-202ENST00000431039 ZPR1O75312 459 aa21.83■■□□□ 1.09
TTC28-202ENST00000431039 CHRNA5P30532 468 aa21.83■■□□□ 1.09
TTC28-202ENST00000431039 POLRMTO00411 1230 aaKnown RBP21.82■■□□□ 1.08
TTC28-202ENST00000431039 MTHFSDQ2M296 383 aaKnown RBP21.82■■□□□ 1.08
TTC28-202ENST00000431039 DALRD3Q5D0E6 543 aaKnown RBP21.82■■□□□ 1.08
TTC28-202ENST00000431039 C9orf131Q5VYM1 1079 aa21.82■■□□□ 1.08
TTC28-202ENST00000431039 NMRK2Q9NPI5 230 aa21.82■■□□□ 1.08
TTC28-202ENST00000431039 CYP19A1P11511 503 aaPredicted RBP21.81■■□□□ 1.08
TTC28-202ENST00000431039 TM4SF1P30408 202 aa21.81■■□□□ 1.08
TTC28-202ENST00000431039 PNNQ9H307 717 aaKnown RBP21.81■■□□□ 1.08
TTC28-202ENST00000431039 COL15A1P39059 1388 aa21.81■■□□□ 1.08
TTC28-202ENST00000431039 DLEC1Q9Y238 1755 aa21.8■■□□□ 1.08
TTC28-202ENST00000431039 ZBTB1Q9Y2K1 713 aa21.8■■□□□ 1.08
TTC28-202ENST00000431039 NRXN2Q9P2S2 1712 aa21.8■■□□□ 1.08
TTC28-202ENST00000431039 CCDC88AQ3V6T2 1871 aa21.78■■□□□ 1.08
TTC28-202ENST00000431039 TOMM70O94826 608 aa21.78■■□□□ 1.08
TTC28-202ENST00000431039 SIPA1L3O60292 1781 aaPredicted RBP21.77■■□□□ 1.08
TTC28-202ENST00000431039 NFIXQ14938 502 aa21.77■■□□□ 1.08
TTC28-202ENST00000431039 RSPH6AQ9H0K4 717 aa21.77■■□□□ 1.08
TTC28-202ENST00000431039 RNF181Q9P0P0 153 aa21.77■■□□□ 1.08
TTC28-202ENST00000431039 NARFQ9UHQ1 456 aa21.77■■□□□ 1.08
TTC28-202ENST00000431039 IFFO2Q5TF58 517 aa21.76■■□□□ 1.07
TTC28-202ENST00000431039 RUNDC1Q96C34 613 aa21.76■■□□□ 1.07
TTC28-202ENST00000431039 PLEKHF1Q96S99 279 aa21.76■■□□□ 1.07
TTC28-202ENST00000431039 WDR90Q96KV7 1748 aa21.75■■□□□ 1.07
TTC28-202ENST00000431039 CANXP27824 592 aaKnown RBP21.75■■□□□ 1.07
TTC28-202ENST00000431039 APLP1P51693 650 aa21.75■■□□□ 1.07
TTC28-202ENST00000431039 TNRC6CQ9HCJ0 1690 aaKnown RBP21.75■■□□□ 1.07
TTC28-202ENST00000431039 BCL2L12Q9HB09 334 aa21.74■■□□□ 1.07
TTC28-202ENST00000431039 PRKAR2BP31323 418 aa21.73■■□□□ 1.07
TTC28-202ENST00000431039 CCDC146Q8IYE0 955 aa21.73■■□□□ 1.07
TTC28-202ENST00000431039 C16orf71Q8IYS4 520 aaPredicted RBP21.73■■□□□ 1.07
TTC28-202ENST00000431039 TTC5Q8N0Z6 440 aa21.73■■□□□ 1.07
TTC28-202ENST00000431039 VSIG10Q8N0Z9 540 aa21.73■■□□□ 1.07
TTC28-202ENST00000431039 SCN7AQ01118 1682 aa21.72■■□□□ 1.07
TTC28-202ENST00000431039 SERPINB2P05120 415 aa21.72■■□□□ 1.07
TTC28-202ENST00000431039 RASSF7Q02833 373 aa21.72■■□□□ 1.07
TTC28-202ENST00000431039 ANKRD31Q8N7Z5 1873 aa21.72■■□□□ 1.07
TTC28-202ENST00000431039 BICDL1Q6ZP65 573 aa21.71■■□□□ 1.07
TTC28-202ENST00000431039 KDM2BQ8NHM5 1336 aa21.71■■□□□ 1.07
TTC28-202ENST00000431039 TIAM2Q8IVF5 1701 aa21.71■■□□□ 1.07
TTC28-202ENST00000431039 CARMIL3Q8ND23 1372 aa21.71■■□□□ 1.07
TTC28-202ENST00000431039 NEFMP07197 916 aa21.7■■□□□ 1.06
TTC28-202ENST00000431039 HNRNPUQ00839 825 aaKnown RBP eCLIP21.7■■□□□ 1.06
TTC28-202ENST00000431039 NGEFQ8N5V2 710 aa21.7■■□□□ 1.06
TTC28-202ENST00000431039 RBM46Q8TBY0 533 aaKnown RBP21.7■■□□□ 1.06
TTC28-202ENST00000431039 YTHDC1Q96MU7 727 aaKnown RBP21.7■■□□□ 1.06
TTC28-202ENST00000431039 CACNA1SQ13698 1873 aa21.69■■□□□ 1.06
TTC28-202ENST00000431039 STARD3NLO95772 234 aa21.69■■□□□ 1.06
TTC28-202ENST00000431039 TEFQ10587 303 aa21.69■■□□□ 1.06
TTC28-202ENST00000431039 NCBP3Q53F19 620 aaKnown RBP21.69■■□□□ 1.06
TTC28-202ENST00000431039 RRAGCQ9HB90 399 aa21.69■■□□□ 1.06
TTC28-202ENST00000431039 ZNF330Q9Y3S2 320 aaPredicted RBP21.69■■□□□ 1.06
TTC28-202ENST00000431039 GNAT3A8MTJ3 354 aa21.68■■□□□ 1.06
TTC28-202ENST00000431039 APAF1O14727 1248 aa21.68■■□□□ 1.06
TTC28-202ENST00000431039 C2CD5Q86YS7 1000 aa21.68■■□□□ 1.06
TTC28-202ENST00000431039 IL17REQ8NFR9 667 aa21.68■■□□□ 1.06
TTC28-202ENST00000431039 GAS2L2Q8NHY3 880 aa21.68■■□□□ 1.06
TTC28-202ENST00000431039 ZNF496Q96IT1 587 aaPredicted RBP21.68■■□□□ 1.06
TTC28-202ENST00000431039 MAPK8IP3Q9UPT6 1336 aa21.68■■□□□ 1.06
TTC28-202ENST00000431039 COL11A2P13942 1736 aaPredicted RBP21.68■■□□□ 1.06
TTC28-202ENST00000431039 HEG1Q9ULI3 1381 aa21.67■■□□□ 1.06
TTC28-202ENST00000431039 EIF5P55010 431 aaKnown RBP21.67■■□□□ 1.06
TTC28-202ENST00000431039 PHACTR3Q96KR7 559 aa21.67■■□□□ 1.06
TTC28-202ENST00000431039 A0A087WZG4 1122 aa21.66■■□□□ 1.06
TTC28-202ENST00000431039 HTRA3P83110 453 aa21.66■■□□□ 1.06
TTC28-202ENST00000431039 ZNF790Q6PG37 636 aa21.66■■□□□ 1.06
TTC28-202ENST00000431039 TBC1D9BQ66K14 1250 aa21.65■■□□□ 1.06
TTC28-202ENST00000431039 DNAJC5GQ8N7S2 189 aa21.65■■□□□ 1.06
TTC28-202ENST00000431039 TTLL6Q8N841 843 aa21.65■■□□□ 1.06
TTC28-202ENST00000431039 BCORQ6W2J9 1755 aa21.65■■□□□ 1.06
TTC28-202ENST00000431039 H0YIN7 160 aa21.64■■□□□ 1.05
TTC28-202ENST00000431039 TMPOP42166 694 aaKnown RBP21.64■■□□□ 1.05
TTC28-202ENST00000431039 PRELPP51888 382 aa21.64■■□□□ 1.05
TTC28-202ENST00000431039 TBC1D2BQ9UPU7 963 aa21.64■■□□□ 1.05
TTC28-202ENST00000431039 LMNB1P20700 586 aa21.63■■□□□ 1.05
TTC28-202ENST00000431039 NFE2L2Q16236 605 aa21.63■■□□□ 1.05
TTC28-202ENST00000431039 CCDC24Q8N4L8 307 aa21.63■■□□□ 1.05
TTC28-202ENST00000431039 DICER1Q9UPY3 1922 aaKnown RBP21.63■■□□□ 1.05
TTC28-202ENST00000431039 FSTL1Q12841 308 aa21.62■■□□□ 1.05
TTC28-202ENST00000431039 TEX13AQ9BXU3 409 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms