RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 NFKBIEO00221 500 aa14.02□□□□□ -0.17
ATG4B-212ENST00000430617 COL11A2P13942 1736 aaPredicted RBP14.01□□□□□ -0.17
ATG4B-212ENST00000430617 POLRMTO00411 1230 aaKnown RBP14.01□□□□□ -0.17
ATG4B-212ENST00000430617 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
ATG4B-212ENST00000430617 ADAMTSL1Q8N6G6 1762 aa14.01□□□□□ -0.17
ATG4B-212ENST00000430617 THSD7BQ9C0I4 1608 aa14.01□□□□□ -0.17
ATG4B-212ENST00000430617 GGNBP2Q9H3C7 697 aa14□□□□□ -0.17
ATG4B-212ENST00000430617 FLT4P35916 1363 aa13.99□□□□□ -0.17
ATG4B-212ENST00000430617 USP42Q9H9J4 1324 aaKnown RBP13.99□□□□□ -0.17
ATG4B-212ENST00000430617 PHKG2P15735 406 aa13.99□□□□□ -0.17
ATG4B-212ENST00000430617 TM4SF1P30408 202 aa13.99□□□□□ -0.17
ATG4B-212ENST00000430617 SPG7Q9UQ90 795 aa13.99□□□□□ -0.17
ATG4B-212ENST00000430617 FYB1O15117 783 aa13.98□□□□□ -0.17
ATG4B-212ENST00000430617 DPY19L2Q6NUT2 758 aa13.98□□□□□ -0.17
ATG4B-212ENST00000430617 SLX4Q8IY92 1834 aa13.98□□□□□ -0.17
ATG4B-212ENST00000430617 TRPM7Q96QT4 1865 aa13.97□□□□□ -0.17
ATG4B-212ENST00000430617 ARFGEF2Q9Y6D5 1785 aa13.97□□□□□ -0.17
ATG4B-212ENST00000430617 TMEM88BA6NKF7 163 aa13.96□□□□□ -0.17
ATG4B-212ENST00000430617 DDNO94850 711 aaPredicted RBP13.96□□□□□ -0.17
ATG4B-212ENST00000430617 IFNL2Q8IZJ0 200 aa13.96□□□□□ -0.17
ATG4B-212ENST00000430617 LTBP1Q14766 1721 aa13.95□□□□□ -0.18
ATG4B-212ENST00000430617 ITGBL1O95965 494 aaPredicted RBP13.95□□□□□ -0.18
ATG4B-212ENST00000430617 CRKLP46109 303 aaKnown RBP13.95□□□□□ -0.18
ATG4B-212ENST00000430617 TTLL6Q8N841 843 aa13.95□□□□□ -0.18
ATG4B-212ENST00000430617 SCN11AQ9UI33 1791 aa13.94□□□□□ -0.18
ATG4B-212ENST00000430617 ERFEQ4G0M1 354 aa13.94□□□□□ -0.18
ATG4B-212ENST00000430617 PUS7Q96PZ0 661 aaKnown RBP13.94□□□□□ -0.18
ATG4B-212ENST00000430617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.18
ATG4B-212ENST00000430617 EMILIN1Q9Y6C2 1016 aa13.94□□□□□ -0.18
ATG4B-212ENST00000430617 KIF24Q5T7B8 1368 aa13.94□□□□□ -0.18
ATG4B-212ENST00000430617 CARMIL3Q8ND23 1372 aa13.94□□□□□ -0.18
ATG4B-212ENST00000430617 WDR33Q9C0J8 1336 aaKnown RBP13.92□□□□□ -0.18
ATG4B-212ENST00000430617 RASSF10A6NK89 507 aa13.92□□□□□ -0.18
ATG4B-212ENST00000430617 USPL1Q5W0Q7 1092 aa13.92□□□□□ -0.18
ATG4B-212ENST00000430617 LDHDQ86WU2 507 aa13.92□□□□□ -0.18
ATG4B-212ENST00000430617 C2CD5Q86YS7 1000 aa13.92□□□□□ -0.18
ATG4B-212ENST00000430617 EYA1Q99502 592 aa13.92□□□□□ -0.18
ATG4B-212ENST00000430617 CARD11Q9BXL7 1154 aa13.92□□□□□ -0.18
ATG4B-212ENST00000430617 PTCD1O75127 700 aaKnown RBP13.91□□□□□ -0.18
ATG4B-212ENST00000430617 MAP2K1Q02750 393 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-212ENST00000430617 NFIXQ14938 502 aa13.91□□□□□ -0.18
ATG4B-212ENST00000430617 DEFB115Q30KQ5 88 aa13.91□□□□□ -0.18
ATG4B-212ENST00000430617 INTS5Q6P9B9 1019 aaKnown RBP13.91□□□□□ -0.18
ATG4B-212ENST00000430617 CFAP44Q96MT7 982 aa13.91□□□□□ -0.18
ATG4B-212ENST00000430617 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-212ENST00000430617 ZNF316A6NFI3 1004 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-212ENST00000430617 ERVV-2B6SEH9 535 aa13.9□□□□□ -0.18
ATG4B-212ENST00000430617 TAF1DQ9H5J8 278 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-212ENST00000430617 C21orf2O43822 256 aa13.89□□□□□ -0.19
ATG4B-212ENST00000430617 TSKSQ9UJT2 592 aa13.89□□□□□ -0.19
ATG4B-212ENST00000430617 H0YIN7 160 aa13.88□□□□□ -0.19
ATG4B-212ENST00000430617 SERPINB2P05120 415 aa13.88□□□□□ -0.19
ATG4B-212ENST00000430617 TESK2Q96S53 571 aa13.88□□□□□ -0.19
ATG4B-212ENST00000430617 BCL2L12Q9HB09 334 aa13.88□□□□□ -0.19
ATG4B-212ENST00000430617 PPM1GO15355 546 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-212ENST00000430617 ZPR1O75312 459 aa13.87□□□□□ -0.19
ATG4B-212ENST00000430617 HSPA5P11021 654 aaKnown RBP13.87□□□□□ -0.19
ATG4B-212ENST00000430617 EIF4G2P78344 907 aaKnown RBP eCLIP13.87□□□□□ -0.19
ATG4B-212ENST00000430617 EAPPQ56P03 285 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-212ENST00000430617 MCOLN1Q9GZU1 580 aa13.87□□□□□ -0.19
ATG4B-212ENST00000430617 IQCA1LA6NCM1 817 aa13.86□□□□□ -0.19
ATG4B-212ENST00000430617 L3MBTL3Q96JM7 780 aaPredicted RBP13.86□□□□□ -0.19
ATG4B-212ENST00000430617 SOS1Q07889 1333 aaPredicted RBP13.86□□□□□ -0.19
ATG4B-212ENST00000430617 LTBP3Q9NS15 1303 aa13.86□□□□□ -0.19
ATG4B-212ENST00000430617 CABP4P57796 275 aa13.85□□□□□ -0.19
ATG4B-212ENST00000430617 MAP1SQ66K74 1059 aaPredicted RBP13.85□□□□□ -0.19
ATG4B-212ENST00000430617 ZNF622Q969S3 477 aaKnown RBP eCLIP13.85□□□□□ -0.191e-6■■□□□ 11.8
ATG4B-212ENST00000430617 ABT1Q9ULW3 272 aaKnown RBP13.85□□□□□ -0.19
ATG4B-212ENST00000430617 WASHC2AQ641Q2 1341 aa13.85□□□□□ -0.19
ATG4B-212ENST00000430617 FMR1Q06787 632 aaKnown RBP eCLIP13.84□□□□□ -0.19
ATG4B-212ENST00000430617 CNTROBQ8N137 903 aa13.84□□□□□ -0.19
ATG4B-212ENST00000430617 TAOK3Q9H2K8 898 aa13.84□□□□□ -0.19
ATG4B-212ENST00000430617 NARFQ9UHQ1 456 aa13.84□□□□□ -0.19
ATG4B-212ENST00000430617 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
ATG4B-212ENST00000430617 SCN7AQ01118 1682 aa13.84□□□□□ -0.19
ATG4B-212ENST00000430617 DNAJC10Q8IXB1 793 aa13.83□□□□□ -0.2
ATG4B-212ENST00000430617 CCDC24Q8N4L8 307 aa13.83□□□□□ -0.2
ATG4B-212ENST00000430617 NFATC2IPQ8NCF5 419 aa13.83□□□□□ -0.2
ATG4B-212ENST00000430617 CAPNS2Q96L46 248 aa13.83□□□□□ -0.2
ATG4B-212ENST00000430617 ZNF541Q9H0D2 1346 aa13.83□□□□□ -0.2
ATG4B-212ENST00000430617 COL15A1P39059 1388 aa13.83□□□□□ -0.2
ATG4B-212ENST00000430617 UBR2Q8IWV8 1755 aa13.82□□□□□ -0.2
ATG4B-212ENST00000430617 GRM1Q13255 1194 aa13.82□□□□□ -0.2
ATG4B-212ENST00000430617 CYP4F22Q6NT55 531 aa13.82□□□□□ -0.2
ATG4B-212ENST00000430617 ST20-MTHFSA0A0A6YYL1 179 aa13.81□□□□□ -0.2
ATG4B-212ENST00000430617 EPHX2P34913 555 aa13.81□□□□□ -0.2
ATG4B-212ENST00000430617 GPR101Q96P66 508 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-212ENST00000430617 BEGAINQ9BUH8 593 aa13.81□□□□□ -0.2
ATG4B-212ENST00000430617 HSP90AB1P08238 724 aaKnown RBP13.8□□□□□ -0.2
ATG4B-212ENST00000430617 EIF4A2Q14240 407 aaKnown RBP13.8□□□□□ -0.2
ATG4B-212ENST00000430617 BICDL1Q6ZP65 573 aa13.8□□□□□ -0.2
ATG4B-212ENST00000430617 PAXIP1Q6ZW49 1069 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-212ENST00000430617 HACL1Q9UJ83 578 aa13.8□□□□□ -0.2
ATG4B-212ENST00000430617 RNF123Q5XPI4 1314 aa13.8□□□□□ -0.2
ATG4B-212ENST00000430617 BCORQ6W2J9 1755 aa13.79□□□□□ -0.2
ATG4B-212ENST00000430617 AOC2O75106 756 aa13.79□□□□□ -0.2
ATG4B-212ENST00000430617 CYP19A1P11511 503 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-212ENST00000430617 DGKZQ13574 1117 aa13.79□□□□□ -0.2
ATG4B-212ENST00000430617 ZNF530Q6P9A1 599 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-212ENST00000430617 CARD14Q9BXL6 1004 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms