RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 HOXB7P09629 217 aa17.24■□□□□ 0.35
RBM39-212ENST00000429968 UBTFL1P0CB47 393 aaPredicted RBP17.24■□□□□ 0.35
RBM39-212ENST00000429968 USP26Q9BXU7 913 aa17.24■□□□□ 0.35
RBM39-212ENST00000429968 OSBPL3Q9H4L5 887 aa17.24■□□□□ 0.35
RBM39-212ENST00000429968 OVOS2A0A0G2JMS6 1433 aa17.24■□□□□ 0.35
RBM39-212ENST00000429968 SRCIN1Q9C0H9 1055 aa17.24■□□□□ 0.35
RBM39-212ENST00000429968 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
RBM39-212ENST00000429968 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
RBM39-212ENST00000429968 DNAAF4Q8WXU2 420 aa17.23■□□□□ 0.35
RBM39-212ENST00000429968 LRRCC1Q9C099 1032 aa17.23■□□□□ 0.35
RBM39-212ENST00000429968 FOXD4L1Q9NU39 408 aa17.23■□□□□ 0.35
RBM39-212ENST00000429968 PPP1R42Q7Z4L9 355 aa17.23■□□□□ 0.35
RBM39-212ENST00000429968 NLRP2Q9NX02 1062 aa17.23■□□□□ 0.35
RBM39-212ENST00000429968 DCCP43146 1447 aa17.22■□□□□ 0.35
RBM39-212ENST00000429968 SSH3Q8TE77 659 aa17.22■□□□□ 0.35
RBM39-212ENST00000429968 IL1RAPL2Q9NP60 686 aa17.22■□□□□ 0.35
RBM39-212ENST00000429968 TAF7LQ5H9L4 462 aa17.21■□□□□ 0.35
RBM39-212ENST00000429968 UNC5CLQ8IV45 518 aa17.21■□□□□ 0.35
RBM39-212ENST00000429968 TNS3Q68CZ2 1445 aa17.21■□□□□ 0.35
RBM39-212ENST00000429968 CHMP5Q9NZZ3 219 aa17.21■□□□□ 0.35
RBM39-212ENST00000429968 STRCQ7RTU9 1775 aa17.21■□□□□ 0.34
RBM39-212ENST00000429968 LMTK3Q96Q04 1460 aa17.2■□□□□ 0.34
RBM39-212ENST00000429968 MX1P20591 662 aa17.2■□□□□ 0.34
RBM39-212ENST00000429968 POLA2Q14181 598 aa17.2■□□□□ 0.34
RBM39-212ENST00000429968 PKD1L3Q7Z443 1732 aa17.2■□□□□ 0.34
RBM39-212ENST00000429968 MAP3K2Q9Y2U5 619 aa17.2■□□□□ 0.34
RBM39-212ENST00000429968 CWF19L2Q2TBE0 894 aaKnown RBP17.19■□□□□ 0.34
RBM39-212ENST00000429968 DBF4Q9UBU7 674 aaPredicted RBP17.19■□□□□ 0.34
RBM39-212ENST00000429968 NPHP3Q7Z494 1330 aa17.19■□□□□ 0.34
RBM39-212ENST00000429968 HSP90AB1P08238 724 aaKnown RBP17.18■□□□□ 0.34
RBM39-212ENST00000429968 PDIA6Q15084 440 aa17.18■□□□□ 0.34
RBM39-212ENST00000429968 NUTM1Q86Y26 1132 aa17.18■□□□□ 0.34
RBM39-212ENST00000429968 K7ELQ4 463 aaPredicted RBP17.18■□□□□ 0.34
RBM39-212ENST00000429968 SRGAP3O43295 1099 aa17.18■□□□□ 0.34
RBM39-212ENST00000429968 PHKG2P15735 406 aa17.18■□□□□ 0.34
RBM39-212ENST00000429968 NFATC2IPQ8NCF5 419 aa17.17■□□□□ 0.34
RBM39-212ENST00000429968 RAPGEF4Q8WZA2 1011 aa17.17■□□□□ 0.34
RBM39-212ENST00000429968 IL25Q9H293 177 aa17.17■□□□□ 0.34
RBM39-212ENST00000429968 SPATA31A3Q5VYP0 1347 aa17.17■□□□□ 0.34
RBM39-212ENST00000429968 GLI3P10071 1580 aa17.17■□□□□ 0.34
RBM39-212ENST00000429968 SURF6O75683 361 aaKnown RBP17.17■□□□□ 0.34
RBM39-212ENST00000429968 MCM4P33991 863 aa17.17■□□□□ 0.34
RBM39-212ENST00000429968 CYP27B1O15528 508 aa17.16■□□□□ 0.34
RBM39-212ENST00000429968 CADPS2Q86UW7 1296 aa17.16■□□□□ 0.34
RBM39-212ENST00000429968 SLC52A2Q9HAB3 445 aa17.16■□□□□ 0.34
RBM39-212ENST00000429968 STAP2Q9UGK3 403 aa17.16■□□□□ 0.34
RBM39-212ENST00000429968 ZNF790Q6PG37 636 aa17.15■□□□□ 0.34
RBM39-212ENST00000429968 MAP4K4O95819 1239 aaPredicted RBP17.15■□□□□ 0.34
RBM39-212ENST00000429968 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
RBM39-212ENST00000429968 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
RBM39-212ENST00000429968 AIMP1Q12904 312 aaKnown RBP17.15■□□□□ 0.34
RBM39-212ENST00000429968 SAMD1Q6SPF0 538 aaPredicted RBP17.15■□□□□ 0.34
RBM39-212ENST00000429968 BRINP3Q76B58 766 aa17.15■□□□□ 0.34
RBM39-212ENST00000429968 ERC2O15083 957 aa17.14■□□□□ 0.33
RBM39-212ENST00000429968 BRD2P25440 801 aaKnown RBP17.14■□□□□ 0.33
RBM39-212ENST00000429968 KSR2Q6VAB6 950 aa17.14■□□□□ 0.33
RBM39-212ENST00000429968 RHPN1Q8TCX5 695 aa17.14■□□□□ 0.33
RBM39-212ENST00000429968 TATP17735 454 aaPredicted RBP17.14■□□□□ 0.33
RBM39-212ENST00000429968 RILPL2Q969X0 211 aa17.14■□□□□ 0.33
RBM39-212ENST00000429968 KAZALD1Q96I82 304 aa17.14■□□□□ 0.33
RBM39-212ENST00000429968 MRC1P22897 1456 aa17.13■□□□□ 0.33
RBM39-212ENST00000429968 CHMLP26374 656 aa17.13■□□□□ 0.33
RBM39-212ENST00000429968 PI4K2BQ8TCG2 481 aa17.13■□□□□ 0.33
RBM39-212ENST00000429968 TNPO1Q92973 898 aaKnown RBP17.13■□□□□ 0.33
RBM39-212ENST00000429968 ZNF496Q96IT1 587 aaPredicted RBP17.13■□□□□ 0.33
RBM39-212ENST00000429968 ESYT1Q9BSJ8 1104 aa17.13■□□□□ 0.33
RBM39-212ENST00000429968 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
RBM39-212ENST00000429968 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.13■□□□□ 0.33
RBM39-212ENST00000429968 ABCA3Q99758 1704 aa17.13■□□□□ 0.33
RBM39-212ENST00000429968 ABCC6O95255 1503 aa17.13■□□□□ 0.33
RBM39-212ENST00000429968 TRIM6-TRIM34B2RNG4 842 aa17.12■□□□□ 0.33
RBM39-212ENST00000429968 RABEP1Q15276 862 aa17.12■□□□□ 0.33
RBM39-212ENST00000429968 PALD1Q9ULE6 856 aa17.12■□□□□ 0.33
RBM39-212ENST00000429968 MYL6BP14649 208 aa17.12■□□□□ 0.33
RBM39-212ENST00000429968 CASC1Q6TDU7 716 aa17.12■□□□□ 0.33
RBM39-212ENST00000429968 DDX21Q9NR30 783 aaKnown RBP eCLIP17.12■□□□□ 0.33
RBM39-212ENST00000429968 AFDNP55196 1824 aaKnown RBP17.11■□□□□ 0.33
RBM39-212ENST00000429968 IGKV5-2P06315 115 aa17.11■□□□□ 0.33
RBM39-212ENST00000429968 RAB3GAP1Q15042 981 aa17.11■□□□□ 0.33
RBM39-212ENST00000429968 SUCLG2Q96I99 432 aa17.11■□□□□ 0.33
RBM39-212ENST00000429968 BRPF3Q9ULD4 1205 aa17.11■□□□□ 0.33
RBM39-212ENST00000429968 USP16Q9Y5T5 823 aa17.11■□□□□ 0.33
RBM39-212ENST00000429968 SHANK3Q9BYB0 1731 aa17.11■□□□□ 0.33
RBM39-212ENST00000429968 CPDO75976 1380 aa17.1■□□□□ 0.33
RBM39-212ENST00000429968 REC8O95072 547 aa17.1■□□□□ 0.33
RBM39-212ENST00000429968 LRP10Q7Z4F1 713 aa17.1■□□□□ 0.33
RBM39-212ENST00000429968 IFNL2Q8IZJ0 200 aa17.1■□□□□ 0.33
RBM39-212ENST00000429968 IL27Q8NEV9 243 aa17.1■□□□□ 0.33
RBM39-212ENST00000429968 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
RBM39-212ENST00000429968 SPG7Q9UQ90 795 aa17.1■□□□□ 0.33
RBM39-212ENST00000429968 ARFGEF2Q9Y6D5 1785 aa17.1■□□□□ 0.33
RBM39-212ENST00000429968 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
RBM39-212ENST00000429968 ZNF335Q9H4Z2 1342 aaPredicted RBP17.1■□□□□ 0.33
RBM39-212ENST00000429968 RAB11FIP3O75154 756 aa17.09■□□□□ 0.33
RBM39-212ENST00000429968 MTX1Q13505 466 aa17.09■□□□□ 0.33
RBM39-212ENST00000429968 CNKSR2Q8WXI2 1034 aa17.09■□□□□ 0.33
RBM39-212ENST00000429968 C9orf78Q9NZ63 289 aaPredicted RBP17.09■□□□□ 0.33
RBM39-212ENST00000429968 ALDH1L1O75891 902 aa17.09■□□□□ 0.33
RBM39-212ENST00000429968 SSFA2P28290 1259 aa17.09■□□□□ 0.33
RBM39-212ENST00000429968 KIF1BPQ96EK5 621 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms