RNA–Protein interactions for RNA: ENST00000429947.1

LINC01237-202, Transcript of long intergenic non-protein coding RNA 1237, humanhuman

TSL 4

Gene LINC01237, Length 470 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01237-202ENST00000429947 WWC3Q9ULE0 1092 aa18.41■□□□□ 0.54
LINC01237-202ENST00000429947 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
LINC01237-202ENST00000429947 ZNF790Q6PG37 636 aa18.4■□□□□ 0.54
LINC01237-202ENST00000429947 UBR2Q8IWV8 1755 aa18.4■□□□□ 0.54
LINC01237-202ENST00000429947 FAM9BQ8IZU0 186 aa18.39■□□□□ 0.53
LINC01237-202ENST00000429947 NLGN1Q8N2Q7 840 aa18.39■□□□□ 0.53
LINC01237-202ENST00000429947 SLC4A9Q96Q91 983 aa18.39■□□□□ 0.53
LINC01237-202ENST00000429947 TRIM35Q9UPQ4 493 aa18.39■□□□□ 0.53
LINC01237-202ENST00000429947 MMP10P09238 476 aa18.38■□□□□ 0.53
LINC01237-202ENST00000429947 THUMPD2Q9BTF0 503 aaKnown RBP18.38■□□□□ 0.53
LINC01237-202ENST00000429947 KCPQ6ZWJ8 1503 aa18.38■□□□□ 0.53
LINC01237-202ENST00000429947 CICQ96RK0 1608 aaPredicted RBP18.38■□□□□ 0.53
LINC01237-202ENST00000429947 TGFB2P61812 414 aa18.37■□□□□ 0.53
LINC01237-202ENST00000429947 VSIG10Q8N0Z9 540 aa18.37■□□□□ 0.53
LINC01237-202ENST00000429947 RTCBQ9Y3I0 505 aaKnown RBP18.37■□□□□ 0.53
LINC01237-202ENST00000429947 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
LINC01237-202ENST00000429947 RC3H1Q5TC82 1133 aaKnown RBP18.36■□□□□ 0.53
LINC01237-202ENST00000429947 MIER1Q8N108 512 aa18.36■□□□□ 0.53
LINC01237-202ENST00000429947 COL5A3P25940 1745 aaPredicted RBP18.35■□□□□ 0.53
LINC01237-202ENST00000429947 KIF3CO14782 793 aa18.35■□□□□ 0.53
LINC01237-202ENST00000429947 ZNF496Q96IT1 587 aaPredicted RBP18.35■□□□□ 0.53
LINC01237-202ENST00000429947 FMNL2Q96PY5 1086 aa18.35■□□□□ 0.53
LINC01237-202ENST00000429947 BABAM1Q9NWV8 329 aa18.35■□□□□ 0.53
LINC01237-202ENST00000429947 A0A0G2JLW4 131 aa18.34■□□□□ 0.53
LINC01237-202ENST00000429947 ARHGEF1Q92888 912 aaKnown RBP18.34■□□□□ 0.53
LINC01237-202ENST00000429947 UBR3Q6ZT12 1888 aa18.34■□□□□ 0.53
LINC01237-202ENST00000429947 TJP1Q07157 1748 aa18.34■□□□□ 0.53
LINC01237-202ENST00000429947 HEG1Q9ULI3 1381 aa18.33■□□□□ 0.53
LINC01237-202ENST00000429947 KDM3BQ7LBC6 1761 aa18.33■□□□□ 0.53
LINC01237-202ENST00000429947 CNTNAP4Q9C0A0 1308 aa18.33■□□□□ 0.53
LINC01237-202ENST00000429947 KCNQ3O43525 872 aa18.33■□□□□ 0.52
LINC01237-202ENST00000429947 ADRA2BP18089 450 aa18.33■□□□□ 0.52
LINC01237-202ENST00000429947 CALD1Q05682 793 aaKnown RBP18.33■□□□□ 0.52
LINC01237-202ENST00000429947 CCDC27Q2M243 656 aa18.33■□□□□ 0.52
LINC01237-202ENST00000429947 TEX13AQ9BXU3 409 aaPredicted RBP18.33■□□□□ 0.52
LINC01237-202ENST00000429947 MIS18AQ9NYP9 233 aa18.33■□□□□ 0.52
LINC01237-202ENST00000429947 RPS6KA4O75676 772 aa18.32■□□□□ 0.52
LINC01237-202ENST00000429947 ARHGAP27Q6ZUM4 889 aa18.32■□□□□ 0.52
LINC01237-202ENST00000429947 DNAJC10Q8IXB1 793 aa18.32■□□□□ 0.52
LINC01237-202ENST00000429947 BCS1LQ9Y276 419 aa18.32■□□□□ 0.52
LINC01237-202ENST00000429947 MYH14Q7Z406 1995 aaKnown RBP18.31■□□□□ 0.52
LINC01237-202ENST00000429947 RFC4P35249 363 aa18.31■□□□□ 0.52
LINC01237-202ENST00000429947 NGEFQ8N5V2 710 aa18.31■□□□□ 0.52
LINC01237-202ENST00000429947 STARD3NLO95772 234 aa18.3■□□□□ 0.52
LINC01237-202ENST00000429947 CYP19A1P11511 503 aaPredicted RBP18.3■□□□□ 0.52
LINC01237-202ENST00000429947 GYS1P13807 737 aa18.3■□□□□ 0.52
LINC01237-202ENST00000429947 CRKLP46109 303 aaKnown RBP18.3■□□□□ 0.52
LINC01237-202ENST00000429947 CCDC87Q9NVE4 849 aa18.3■□□□□ 0.52
LINC01237-202ENST00000429947 TSPYL4Q9UJ04 414 aa18.3■□□□□ 0.52
LINC01237-202ENST00000429947 PARP3Q9Y6F1 533 aa18.3■□□□□ 0.52
LINC01237-202ENST00000429947 CHL1O00533 1208 aa18.29■□□□□ 0.52
LINC01237-202ENST00000429947 TOMM70O94826 608 aa18.29■□□□□ 0.52
LINC01237-202ENST00000429947 SNRPA1P09661 255 aaKnown RBP18.29■□□□□ 0.52
LINC01237-202ENST00000429947 DPEP1P16444 411 aa18.29■□□□□ 0.52
LINC01237-202ENST00000429947 APLP1P51693 650 aa18.28■□□□□ 0.52
LINC01237-202ENST00000429947 EIF4A1P60842 406 aaKnown RBP18.28■□□□□ 0.52
LINC01237-202ENST00000429947 WWC1Q8IX03 1113 aa18.28■□□□□ 0.52
LINC01237-202ENST00000429947 CFAP44Q96MT7 982 aa18.28■□□□□ 0.52
LINC01237-202ENST00000429947 PXDNLA1KZ92 1463 aa18.27■□□□□ 0.52
LINC01237-202ENST00000429947 GNAI1P63096 354 aa18.27■□□□□ 0.52
LINC01237-202ENST00000429947 INTS5Q6P9B9 1019 aaKnown RBP18.27■□□□□ 0.52
LINC01237-202ENST00000429947 IFT57Q9NWB7 429 aa18.27■□□□□ 0.52
LINC01237-202ENST00000429947 ZNF853P0CG23 659 aa18.26■□□□□ 0.51
LINC01237-202ENST00000429947 LAS1LQ9Y4W2 734 aaKnown RBP18.26■□□□□ 0.51
LINC01237-202ENST00000429947 KCNA3P22001 575 aa18.25■□□□□ 0.51
LINC01237-202ENST00000429947 IL16Q14005 1332 aa18.24■□□□□ 0.51
LINC01237-202ENST00000429947 WDR63Q8IWG1 891 aa18.24■□□□□ 0.51
LINC01237-202ENST00000429947 DNAJC5GQ8N7S2 189 aa18.24■□□□□ 0.51
LINC01237-202ENST00000429947 PIM2Q9P1W9 311 aa18.24■□□□□ 0.51
LINC01237-202ENST00000429947 USP16Q9Y5T5 823 aa18.24■□□□□ 0.51
LINC01237-202ENST00000429947 C10orf71Q711Q0 1435 aa18.23■□□□□ 0.51
LINC01237-202ENST00000429947 LAMB4A4D0S4 1761 aa18.23■□□□□ 0.51
LINC01237-202ENST00000429947 ZBTB1Q9Y2K1 713 aa18.23■□□□□ 0.51
LINC01237-202ENST00000429947 SALL2Q9Y467 1007 aaPredicted RBP18.23■□□□□ 0.51
LINC01237-202ENST00000429947 PRAMEF22A3QJZ6 481 aa18.22■□□□□ 0.51
LINC01237-202ENST00000429947 C9orf131Q5VYM1 1079 aa18.22■□□□□ 0.51
LINC01237-202ENST00000429947 NMRK2Q9NPI5 230 aa18.22■□□□□ 0.51
LINC01237-202ENST00000429947 MBIPQ9NS73 344 aa18.22■□□□□ 0.51
LINC01237-202ENST00000429947 SOS1Q07889 1333 aaPredicted RBP18.22■□□□□ 0.51
LINC01237-202ENST00000429947 CANXP27824 592 aaKnown RBP18.21■□□□□ 0.51
LINC01237-202ENST00000429947 DALRD3Q5D0E6 543 aaKnown RBP18.21■□□□□ 0.51
LINC01237-202ENST00000429947 A1BGP04217 495 aa18.2■□□□□ 0.5
LINC01237-202ENST00000429947 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
LINC01237-202ENST00000429947 FKBP8Q14318 412 aa18.2■□□□□ 0.5
LINC01237-202ENST00000429947 SRP68Q9UHB9 627 aaKnown RBP18.2■□□□□ 0.5
LINC01237-202ENST00000429947 EIF5P55010 431 aaKnown RBP18.19■□□□□ 0.5
LINC01237-202ENST00000429947 C16orf71Q8IYS4 520 aaPredicted RBP18.19■□□□□ 0.5
LINC01237-202ENST00000429947 RBM46Q8TBY0 533 aaKnown RBP18.19■□□□□ 0.5
LINC01237-202ENST00000429947 KIF13BQ9NQT8 1826 aa18.19■□□□□ 0.5
LINC01237-202ENST00000429947 C4AP0C0L4 1744 aa18.18■□□□□ 0.5
LINC01237-202ENST00000429947 A0A087WZG4 1122 aa18.18■□□□□ 0.5
LINC01237-202ENST00000429947 HOXB7P09629 217 aa18.18■□□□□ 0.5
LINC01237-202ENST00000429947 TM4SF1P30408 202 aa18.18■□□□□ 0.5
LINC01237-202ENST00000429947 USP42Q9H9J4 1324 aaKnown RBP18.18■□□□□ 0.5
LINC01237-202ENST00000429947 COL15A1P39059 1388 aa18.17■□□□□ 0.5
LINC01237-202ENST00000429947 DDR1Q08345 913 aa18.17■□□□□ 0.5
LINC01237-202ENST00000429947 NPM2Q86SE8 214 aaKnown RBP18.17■□□□□ 0.5
LINC01237-202ENST00000429947 ERBB4Q15303 1308 aa18.17■□□□□ 0.5
LINC01237-202ENST00000429947 ZNF521Q96K83 1311 aa18.17■□□□□ 0.5
LINC01237-202ENST00000429947 N4BP2Q86UW6 1770 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms