RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 THRAP3Q9Y2W1 955 aaKnown RBP27.85■■■□□ 2.05
VSX1-205ENST00000429762 PDIA6Q15084 440 aa27.84■■■□□ 2.05
VSX1-205ENST00000429762 SPATA31A6Q5VVP1 1343 aa27.84■■■□□ 2.05
VSX1-205ENST00000429762 PTCD1O75127 700 aaKnown RBP27.84■■■□□ 2.05
VSX1-205ENST00000429762 MYL6BP14649 208 aa27.83■■■□□ 2.05
VSX1-205ENST00000429762 N4BP2Q86UW6 1770 aaPredicted RBP27.83■■■□□ 2.05
VSX1-205ENST00000429762 DDB1Q16531 1140 aa27.82■■■□□ 2.04
VSX1-205ENST00000429762 PIGBQ92521 554 aa27.82■■■□□ 2.04
VSX1-205ENST00000429762 KAT6BQ8WYB5 2073 aa27.82■■■□□ 2.04
VSX1-205ENST00000429762 ADCY9O60503 1353 aa27.82■■■□□ 2.04
VSX1-205ENST00000429762 PI4KAP2A4QPH2 592 aa27.82■■■□□ 2.04
VSX1-205ENST00000429762 SIRT2Q8IXJ6 389 aa27.82■■■□□ 2.04
VSX1-205ENST00000429762 PI4KAP1Q8N8J0 262 aa27.82■■■□□ 2.04
VSX1-205ENST00000429762 DDX21Q9NR30 783 aaKnown RBP eCLIP27.82■■■□□ 2.04
VSX1-205ENST00000429762 PDZRN3Q9UPQ7 1066 aa27.82■■■□□ 2.04
VSX1-205ENST00000429762 LAMB4A4D0S4 1761 aa27.81■■■□□ 2.04
VSX1-205ENST00000429762 AIMP1Q12904 312 aaKnown RBP27.81■■■□□ 2.04
VSX1-205ENST00000429762 CDCA7Q9BWT1 371 aaPredicted RBP27.81■■■□□ 2.04
VSX1-205ENST00000429762 DOT1LQ8TEK3 1739 aa27.8■■■□□ 2.04
VSX1-205ENST00000429762 PXDNLA1KZ92 1463 aa27.8■■■□□ 2.04
VSX1-205ENST00000429762 FAM98CQ17RN3 349 aaKnown RBP27.8■■■□□ 2.04
VSX1-205ENST00000429762 ASAP1Q9ULH1 1129 aa27.8■■■□□ 2.04
VSX1-205ENST00000429762 MEX3CQ5U5Q3 659 aaKnown RBP27.79■■■□□ 2.04
VSX1-205ENST00000429762 SYTL4Q96C24 671 aaPredicted RBP27.79■■■□□ 2.04
VSX1-205ENST00000429762 HYPKQ9NX55 129 aa27.79■■■□□ 2.04
VSX1-205ENST00000429762 BARGINQ6ZT62 677 aa27.78■■■□□ 2.04
VSX1-205ENST00000429762 DNAAF4Q8WXU2 420 aa27.78■■■□□ 2.04
VSX1-205ENST00000429762 USP21Q9UK80 565 aa27.78■■■□□ 2.04
VSX1-205ENST00000429762 ATP10DQ9P241 1426 aa27.78■■■□□ 2.04
VSX1-205ENST00000429762 VPS72Q15906 364 aa27.77■■■□□ 2.04
VSX1-205ENST00000429762 FNBP4Q8N3X1 1017 aaPredicted RBP27.77■■■□□ 2.04
VSX1-205ENST00000429762 MARCH10Q8NA82 808 aaPredicted RBP27.77■■■□□ 2.04
VSX1-205ENST00000429762 A0A0G2JS52 829 aa27.77■■■□□ 2.04
VSX1-205ENST00000429762 MAP3K2Q9Y2U5 619 aa27.77■■■□□ 2.04
VSX1-205ENST00000429762 ATG3Q9NT62 314 aa27.75■■■□□ 2.03
VSX1-205ENST00000429762 PRIM1P49642 420 aaKnown RBP27.75■■■□□ 2.03
VSX1-205ENST00000429762 XAGE3Q8WTP9 111 aa27.75■■■□□ 2.03
VSX1-205ENST00000429762 CEP85Q6P2H3 762 aa27.74■■■□□ 2.03
VSX1-205ENST00000429762 ACSBG1Q96GR2 724 aa27.74■■■□□ 2.03
VSX1-205ENST00000429762 SRCIN1Q9C0H9 1055 aa27.74■■■□□ 2.03
VSX1-205ENST00000429762 BCL9O00512 1426 aa27.74■■■□□ 2.03
VSX1-205ENST00000429762 BEND3Q5T5X7 828 aa27.73■■■□□ 2.03
VSX1-205ENST00000429762 SMC5Q8IY18 1101 aa27.73■■■□□ 2.03
VSX1-205ENST00000429762 KSR2Q6VAB6 950 aa27.73■■■□□ 2.03
VSX1-205ENST00000429762 COPS6Q7L5N1 327 aa27.72■■■□□ 2.03
VSX1-205ENST00000429762 LRP10Q7Z4F1 713 aa27.72■■■□□ 2.03
VSX1-205ENST00000429762 ANKRD44Q8N8A2 993 aa27.71■■■□□ 2.03
VSX1-205ENST00000429762 RBM42Q9BTD8 480 aaKnown RBP27.71■■■□□ 2.03
VSX1-205ENST00000429762 USP44Q9H0E7 712 aa27.71■■■□□ 2.03
VSX1-205ENST00000429762 A1BGP04217 495 aa27.71■■■□□ 2.03
VSX1-205ENST00000429762 MYT1Q01538 1121 aa27.71■■■□□ 2.03
VSX1-205ENST00000429762 RBM19Q9Y4C8 960 aaKnown RBP27.71■■■□□ 2.03
VSX1-205ENST00000429762 NBPF26B4DH59 902 aa27.7■■■□□ 2.03
VSX1-205ENST00000429762 NBPF14Q5TI25 921 aa27.7■■■□□ 2.03
VSX1-205ENST00000429762 NBPF10Q6P3W6 841 aaKnown RBP27.7■■■□□ 2.03
VSX1-205ENST00000429762 NBPF15Q8N660 670 aa27.7■■■□□ 2.03
VSX1-205ENST00000429762 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.7■■■□□ 2.02
VSX1-205ENST00000429762 GNAI2P04899 355 aa27.69■■■□□ 2.02
VSX1-205ENST00000429762 AFF2P51816 1311 aa27.69■■■□□ 2.02
VSX1-205ENST00000429762 DDX58O95786 925 aaKnown RBP27.68■■■□□ 2.02
VSX1-205ENST00000429762 GNAI3P08754 354 aa27.68■■■□□ 2.02
VSX1-205ENST00000429762 RIC3Q7Z5B4 369 aa27.68■■■□□ 2.02
VSX1-205ENST00000429762 LRRFIP2Q9Y608 721 aaKnown RBP27.68■■■□□ 2.02
VSX1-205ENST00000429762 CWF19L2Q2TBE0 894 aaKnown RBP27.68■■■□□ 2.02
VSX1-205ENST00000429762 DNAJC10Q8IXB1 793 aa27.68■■■□□ 2.02
VSX1-205ENST00000429762 PDE4AP27815 886 aa27.67■■■□□ 2.02
VSX1-205ENST00000429762 RPAP2Q8IXW5 612 aaPredicted RBP27.66■■■□□ 2.02
VSX1-205ENST00000429762 UBTFL1P0CB47 393 aaPredicted RBP27.66■■■□□ 2.02
VSX1-205ENST00000429762 NBPF7P0C2Y1 421 aaPredicted RBP27.65■■■□□ 2.02
VSX1-205ENST00000429762 LNPKQ9C0E8 428 aa27.65■■■□□ 2.02
VSX1-205ENST00000429762 NUCB1Q02818 461 aa27.64■■■□□ 2.02
VSX1-205ENST00000429762 ANKRD45Q5TZF3 282 aa27.64■■■□□ 2.02
VSX1-205ENST00000429762 SLC4A9Q96Q91 983 aa27.64■■■□□ 2.02
VSX1-205ENST00000429762 GCC1Q96CN9 775 aa27.64■■■□□ 2.01
VSX1-205ENST00000429762 MYD88Q99836 296 aa27.62■■■□□ 2.01
VSX1-205ENST00000429762 BCL11AQ9H165 835 aa27.62■■■□□ 2.01
VSX1-205ENST00000429762 ARFGEF2Q9Y6D5 1785 aa27.62■■■□□ 2.01
VSX1-205ENST00000429762 ERBB4Q15303 1308 aa27.62■■■□□ 2.01
VSX1-205ENST00000429762 TTLL7Q6ZT98 887 aa27.62■■■□□ 2.01
VSX1-205ENST00000429762 ANKRD13DQ6ZTN6 518 aa27.62■■■□□ 2.01
VSX1-205ENST00000429762 KCNQ2O43526 872 aa27.61■■■□□ 2.01
VSX1-205ENST00000429762 CHD1LQ86WJ1 897 aa27.61■■■□□ 2.01
VSX1-205ENST00000429762 PNMA6EA0A0J9YXQ4 647 aa27.6■■■□□ 2.01
VSX1-205ENST00000429762 IGKV5-2P06315 115 aa27.6■■■□□ 2.01
VSX1-205ENST00000429762 DCTPP1Q9H773 170 aa27.6■■■□□ 2.01
VSX1-205ENST00000429762 THSD7AQ9UPZ6 1657 aa27.6■■■□□ 2.01
VSX1-205ENST00000429762 APBB1O00213 710 aa27.6■■■□□ 2.01
VSX1-205ENST00000429762 ALDH1L1O75891 902 aa27.6■■■□□ 2.01
VSX1-205ENST00000429762 ZNF330Q9Y3S2 320 aaPredicted RBP27.6■■■□□ 2.01
VSX1-205ENST00000429762 VSIG10Q8N0Z9 540 aa27.59■■■□□ 2.01
VSX1-205ENST00000429762 LINS1Q8NG48 757 aa27.59■■■□□ 2.01
VSX1-205ENST00000429762 FAM182BQ5T319 152 aa27.59■■■□□ 2.01
VSX1-205ENST00000429762 METTL22Q9BUU2 404 aaPredicted RBP27.59■■■□□ 2.01
VSX1-205ENST00000429762 BACH2Q9BYV9 841 aa27.59■■■□□ 2.01
VSX1-205ENST00000429762 TJP1Q07157 1748 aa27.58■■■□□ 2.01
VSX1-205ENST00000429762 GJD4Q96KN9 370 aaPredicted RBP27.58■■■□□ 2.01
VSX1-205ENST00000429762 C9orf78Q9NZ63 289 aaPredicted RBP27.58■■■□□ 2.01
VSX1-205ENST00000429762 ATP8B2P98198 1209 aa27.57■■■□□ 2
VSX1-205ENST00000429762 AFDNP55196 1824 aaKnown RBP27.56■■■□□ 2
VSX1-205ENST00000429762 HMMRO75330 724 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms