RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 NUP188Q5SRE5 1749 aa19.39■□□□□ 0.69
GARNL3-204ENST00000429629 UBR2Q8IWV8 1755 aa19.39■□□□□ 0.69
GARNL3-204ENST00000429629 GNPATO15228 680 aa19.38■□□□□ 0.69
GARNL3-204ENST00000429629 C5P01031 1676 aa19.38■□□□□ 0.69
GARNL3-204ENST00000429629 EIF5P55010 431 aaKnown RBP19.38■□□□□ 0.69
GARNL3-204ENST00000429629 TRAPPC3LQ5T215 181 aa19.38■□□□□ 0.69
GARNL3-204ENST00000429629 PNPLA7Q6ZV29 1317 aa19.37■□□□□ 0.69
GARNL3-204ENST00000429629 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.37■□□□□ 0.69
GARNL3-204ENST00000429629 SLFN5Q08AF3 891 aa19.37■□□□□ 0.69
GARNL3-204ENST00000429629 TRMT2AQ8IZ69 625 aaKnown RBP19.37■□□□□ 0.69
GARNL3-204ENST00000429629 A0A087WZG4 1122 aa19.36■□□□□ 0.69
GARNL3-204ENST00000429629 SENP3-EIF4A1A0A087X0R7 540 aa19.36■□□□□ 0.69
GARNL3-204ENST00000429629 PRAMEF22A3QJZ6 481 aa19.36■□□□□ 0.69
GARNL3-204ENST00000429629 RGL2O15211 777 aa19.36■□□□□ 0.69
GARNL3-204ENST00000429629 DUSP27Q5VZP5 1158 aa19.36■□□□□ 0.69
GARNL3-204ENST00000429629 COL23A1Q86Y22 540 aaPredicted RBP19.36■□□□□ 0.69
GARNL3-204ENST00000429629 SPINK5Q9NQ38 1064 aaPredicted RBP19.36■□□□□ 0.69
GARNL3-204ENST00000429629 KDM3BQ7LBC6 1761 aa19.35■□□□□ 0.69
GARNL3-204ENST00000429629 FANCIQ9NVI1 1328 aa19.35■□□□□ 0.69
GARNL3-204ENST00000429629 A1BGP04217 495 aa19.35■□□□□ 0.69
GARNL3-204ENST00000429629 HNRNPUQ00839 825 aaKnown RBP eCLIP19.35■□□□□ 0.69
GARNL3-204ENST00000429629 ZBTB1Q9Y2K1 713 aa19.35■□□□□ 0.69
GARNL3-204ENST00000429629 C4BP0C0L5 1744 aa19.34■□□□□ 0.69
GARNL3-204ENST00000429629 C8orf58Q8NAV2 365 aa19.34■□□□□ 0.69
GARNL3-204ENST00000429629 ARHGEF1Q92888 912 aaKnown RBP19.34■□□□□ 0.69
GARNL3-204ENST00000429629 TSR2Q969E8 191 aaKnown RBP19.34■□□□□ 0.69
GARNL3-204ENST00000429629 VIRMAQ69YN4 1812 aaKnown RBP19.34■□□□□ 0.69
GARNL3-204ENST00000429629 PSDA5PKW4 1024 aaPredicted RBP19.33■□□□□ 0.68
GARNL3-204ENST00000429629 NPM2Q86SE8 214 aaKnown RBP19.33■□□□□ 0.68
GARNL3-204ENST00000429629 AMIGO3Q86WK7 504 aa19.33■□□□□ 0.68
GARNL3-204ENST00000429629 ZBED9Q6R2W3 1325 aa19.32■□□□□ 0.68
GARNL3-204ENST00000429629 NBPF26B4DH59 902 aa19.32■□□□□ 0.68
GARNL3-204ENST00000429629 RFC4P35249 363 aa19.32■□□□□ 0.68
GARNL3-204ENST00000429629 KRT24Q2M2I5 525 aa19.32■□□□□ 0.68
GARNL3-204ENST00000429629 NBPF10Q6P3W6 841 aaKnown RBP19.32■□□□□ 0.68
GARNL3-204ENST00000429629 NBPF15Q8N660 670 aa19.32■□□□□ 0.68
GARNL3-204ENST00000429629 MTFR1LQ9H019 292 aa19.32■□□□□ 0.68
GARNL3-204ENST00000429629 TJP1Q07157 1748 aa19.31■□□□□ 0.68
GARNL3-204ENST00000429629 CANXP27824 592 aaKnown RBP19.31■□□□□ 0.68
GARNL3-204ENST00000429629 TWISTNBQ3B726 338 aaPredicted RBP19.31■□□□□ 0.68
GARNL3-204ENST00000429629 HDGFL1Q5TGJ6 251 aa19.31■□□□□ 0.68
GARNL3-204ENST00000429629 DDX21Q9NR30 783 aaKnown RBP eCLIP19.31■□□□□ 0.68
GARNL3-204ENST00000429629 DBF4Q9UBU7 674 aaPredicted RBP19.31■□□□□ 0.68
GARNL3-204ENST00000429629 CT47B1P0C2W7 299 aaPredicted RBP19.3■□□□□ 0.68
GARNL3-204ENST00000429629 EIF2S2P20042 333 aaKnown RBP19.3■□□□□ 0.68
GARNL3-204ENST00000429629 PDIA6Q15084 440 aa19.3■□□□□ 0.68
GARNL3-204ENST00000429629 CCDC30Q5VVM6 783 aa19.3■□□□□ 0.68
GARNL3-204ENST00000429629 NLGN1Q8N2Q7 840 aa19.3■□□□□ 0.68
GARNL3-204ENST00000429629 ZNF428Q96B54 188 aa19.3■□□□□ 0.68
GARNL3-204ENST00000429629 NARFQ9UHQ1 456 aa19.3■□□□□ 0.68
GARNL3-204ENST00000429629 TAF1LQ8IZX4 1826 aa19.3■□□□□ 0.68
GARNL3-204ENST00000429629 COL5A3P25940 1745 aaPredicted RBP19.29■□□□□ 0.68
GARNL3-204ENST00000429629 VAMP4O75379 141 aa19.29■□□□□ 0.68
GARNL3-204ENST00000429629 PHF14O94880 888 aa19.29■□□□□ 0.68
GARNL3-204ENST00000429629 EXOSC9Q06265 439 aaKnown RBP19.29■□□□□ 0.68
GARNL3-204ENST00000429629 LRP10Q7Z4F1 713 aa19.29■□□□□ 0.68
GARNL3-204ENST00000429629 TSPYL6Q8N831 410 aa19.29■□□□□ 0.68
GARNL3-204ENST00000429629 USP42Q9H9J4 1324 aaKnown RBP19.28■□□□□ 0.68
GARNL3-204ENST00000429629 CDCA7LQ96GN5 454 aa19.28■□□□□ 0.68
GARNL3-204ENST00000429629 PDGFDQ9GZP0 370 aaPredicted RBP19.28■□□□□ 0.68
GARNL3-204ENST00000429629 HYPKQ9NX55 129 aa19.28■□□□□ 0.68
GARNL3-204ENST00000429629 COL15A1P39059 1388 aa19.28■□□□□ 0.68
GARNL3-204ENST00000429629 ELL2O00472 640 aaPredicted RBP19.27■□□□□ 0.68
GARNL3-204ENST00000429629 ZPR1O75312 459 aa19.27■□□□□ 0.68
GARNL3-204ENST00000429629 CLEC4GQ6UXB4 293 aa19.27■□□□□ 0.68
GARNL3-204ENST00000429629 SPON1Q9HCB6 807 aa19.27■□□□□ 0.68
GARNL3-204ENST00000429629 ERVV-1B6SEH8 477 aa19.26■□□□□ 0.67
GARNL3-204ENST00000429629 MSH5O43196 834 aa19.26■□□□□ 0.67
GARNL3-204ENST00000429629 QSER1Q2KHR3 1735 aa19.25■□□□□ 0.67
GARNL3-204ENST00000429629 GYS1P13807 737 aa19.25■□□□□ 0.67
GARNL3-204ENST00000429629 DZIP3Q86Y13 1208 aaKnown RBP19.25■□□□□ 0.67
GARNL3-204ENST00000429629 CAMTA2O94983 1202 aa19.24■□□□□ 0.67
GARNL3-204ENST00000429629 SMIM5Q71RC9 77 aa19.24■□□□□ 0.67
GARNL3-204ENST00000429629 SGIP1Q9BQI5 828 aa19.24■□□□□ 0.67
GARNL3-204ENST00000429629 CHPF2Q9P2E5 772 aa19.24■□□□□ 0.67
GARNL3-204ENST00000429629 MYH14Q7Z406 1995 aaKnown RBP19.23■□□□□ 0.67
GARNL3-204ENST00000429629 STK31Q9BXU1 1019 aa19.23■□□□□ 0.67
GARNL3-204ENST00000429629 ZBTB7AO95365 584 aa19.22■□□□□ 0.67
GARNL3-204ENST00000429629 MYL6BP14649 208 aa19.22■□□□□ 0.67
GARNL3-204ENST00000429629 TM4SF1P30408 202 aa19.22■□□□□ 0.67
GARNL3-204ENST00000429629 PROSER3Q2NL68 480 aa19.22■□□□□ 0.67
GARNL3-204ENST00000429629 USPL1Q5W0Q7 1092 aa19.22■□□□□ 0.67
GARNL3-204ENST00000429629 TBC1D2BQ9UPU7 963 aa19.22■□□□□ 0.67
GARNL3-204ENST00000429629 ZNF652Q9Y2D9 606 aa19.22■□□□□ 0.67
GARNL3-204ENST00000429629 UBR3Q6ZT12 1888 aa19.22■□□□□ 0.67
GARNL3-204ENST00000429629 POLD1P28340 1107 aa19.21■□□□□ 0.67
GARNL3-204ENST00000429629 PTGER2P43116 358 aa19.21■□□□□ 0.67
GARNL3-204ENST00000429629 PIP4K2AP48426 406 aaPredicted RBP19.21■□□□□ 0.67
GARNL3-204ENST00000429629 COPS6Q7L5N1 327 aa19.21■□□□□ 0.67
GARNL3-204ENST00000429629 NECTIN2Q92692 538 aa19.21■□□□□ 0.67
GARNL3-204ENST00000429629 BCL2L12Q9HB09 334 aa19.21■□□□□ 0.67
GARNL3-204ENST00000429629 MAP3K15Q6ZN16 1313 aa19.21■□□□□ 0.67
GARNL3-204ENST00000429629 CASZ1Q86V15 1759 aa19.2■□□□□ 0.66
GARNL3-204ENST00000429629 KIF6Q6ZMV9 814 aa19.2■□□□□ 0.66
GARNL3-204ENST00000429629 SRP68Q9UHB9 627 aaKnown RBP19.2■□□□□ 0.66
GARNL3-204ENST00000429629 ATF5Q9Y2D1 282 aaPredicted RBP19.2■□□□□ 0.66
GARNL3-204ENST00000429629 ZNF330Q9Y3S2 320 aaPredicted RBP19.2■□□□□ 0.66
GARNL3-204ENST00000429629 SLC4A2P04920 1241 aa19.19■□□□□ 0.66
GARNL3-204ENST00000429629 FKBP8Q14318 412 aa19.19■□□□□ 0.66
GARNL3-204ENST00000429629 ALDH1L2Q3SY69 923 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms