RNA–Protein interactions for RNA: ENST00000429136.5

ATP13A3-202, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-202ENST00000429136 SMC3Q9UQE7 1217 aa6.52□□□□□ -1.37
ATP13A3-202ENST00000429136 UBR1Q8IWV7 1749 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 AACSQ86V21 672 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 IFNL2Q8IZJ0 200 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 ORAI2Q96SN7 254 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 NPHP4O75161 1426 aaPredicted RBP6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 GOLGA6L4A6NEF3 574 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 MSNP26038 577 aaKnown RBP6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 PSMA5P28066 241 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 TSHZ3Q63HK5 1081 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 LINS1Q8NG48 757 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 FSD1Q9BTV5 496 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 LGR6Q9HBX8 967 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 ECHDC1Q9NTX5 307 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 NRXN3Q9Y4C0 1643 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 NPHP3Q7Z494 1330 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 ADGRL3Q9HAR2 1447 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 MON2Q7Z3U7 1717 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 PNMA6EA0A0J9YXQ4 647 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 EPB41L2O43491 1005 aaKnown RBP6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 BAG4O95429 457 aaKnown RBP6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 ANXA1P04083 346 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 CHMLP26374 656 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 SSH3Q8TE77 659 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 USP44Q9H0E7 712 aa6.51□□□□□ -1.37
ATP13A3-202ENST00000429136 WDR33Q9C0J8 1336 aaKnown RBP6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 MAP4K4O95819 1239 aaPredicted RBP6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 MYL6BP14649 208 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 EVA1CP58658 441 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 ARHGEF25Q86VW2 580 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 IBTKQ9P2D0 1353 aaPredicted RBP6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 TTC41PQ6P2S7 1318 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 PRPF40AO75400 957 aaKnown RBP6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 LRRFIP1Q32MZ4 808 aaKnown RBP6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 TAF7LQ5H9L4 462 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 GORABQ5T7V8 394 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 CAVIN1Q6NZI2 390 aaKnown RBP6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 NAP1L5Q96NT1 182 aaPredicted RBP6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 FMNL2Q96PY5 1086 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 DDX21Q9NR30 783 aaKnown RBP eCLIP6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 SSH2Q76I76 1423 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 GRM8O00222 908 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 NASPP49321 788 aaPredicted RBP6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 KLHL40Q2TBA0 621 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 CWC27Q6UX04 472 aaKnown RBP6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 CHMP4CQ96CF2 233 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 PRDM11Q9NQV5 511 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 ZNF330Q9Y3S2 320 aaPredicted RBP6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 ATP10DQ9P241 1426 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 C3P01024 1663 aa6.5□□□□□ -1.37
ATP13A3-202ENST00000429136 EVI5LQ96CN4 794 aa6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 ZSCAN31Q96LW9 406 aaPredicted RBP6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 UPF3BQ9BZI7 483 aaKnown RBP6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 STAP2Q9UGK3 403 aa6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 KIF3AQ9Y496 699 aa6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 CYP46A1Q9Y6A2 500 aa6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 A0A0G2JS52 829 aa6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 SNRPA1P09661 255 aaKnown RBP6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 TPRNQ4KMQ1 711 aa6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 TOM1L2Q6ZVM7 507 aa6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 TMX3Q96JJ7 454 aa6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 NCAPD2Q15021 1401 aa6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 MYD88Q99836 296 aa6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 SIL1Q9H173 461 aa6.49□□□□□ -1.37
ATP13A3-202ENST00000429136 PDIA4P13667 645 aaKnown RBP6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 HSP90B1P14625 803 aaKnown RBP6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 CCDC173Q0VFZ6 552 aa6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 ANKRD1Q15327 319 aa6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 BEND3Q5T5X7 828 aa6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 NRKQ7Z2Y5 1582 aa6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 GIGYF1O75420 1035 aaPredicted RBP6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 PDCP20941 246 aa6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 INTS4Q96HW7 963 aaKnown RBP6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 NAP1L2Q9ULW6 460 aaPredicted RBP6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 CEP170BQ9Y4F5 1589 aaPredicted RBP6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 AKAP12Q02952 1782 aa6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 NBPF7P0C2Y1 421 aaPredicted RBP6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 FOXD4L6Q3SYB3 417 aaPredicted RBP6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 FOXD4L3Q6VB84 417 aaPredicted RBP6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 DCAF5Q96JK2 942 aa6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 JAKMIP1Q96N16 626 aaKnown RBP6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 PDRG1Q9NUG6 133 aa6.48□□□□□ -1.37
ATP13A3-202ENST00000429136 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 ANKRD13DQ6ZTN6 518 aa6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 XAGE3Q8WTP9 111 aa6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 SH2B1Q9NRF2 756 aaPredicted RBP6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 LIMCH1Q9UPQ0 1083 aa6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 SETD1AO15047 1707 aaKnown RBP6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 KCNQ3O43525 872 aa6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 XRCC6P12956 609 aaKnown RBP eCLIP6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 ZNF790Q6PG37 636 aa6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 PXDNLA1KZ92 1463 aa6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 FER1L4A9Z1Z3 1794 aa6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 VPS37CA5D8V6 355 aaPredicted RBP6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 CASTP20810 708 aaKnown RBP6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 SLC39A6Q13433 755 aa6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 KRT32Q14532 448 aa6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 CWF19L2Q2TBE0 894 aaKnown RBP6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 BLOC1S2Q6QNY1 142 aa6.47□□□□□ -1.37
ATP13A3-202ENST00000429136 COPS6Q7L5N1 327 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms