RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 NALCNQ8IZF0 1738 aa19.03■□□□□ 0.64
GHDC-203ENST00000428494 SOS1Q07889 1333 aaPredicted RBP19.03■□□□□ 0.64
GHDC-203ENST00000428494 CPA1P15085 419 aa19.03■□□□□ 0.64
GHDC-203ENST00000428494 SSH3Q8TE77 659 aa19.03■□□□□ 0.64
GHDC-203ENST00000428494 CNPY2Q9Y2B0 182 aa19.03■□□□□ 0.64
GHDC-203ENST00000428494 UQCRHLA0A096LP55 91 aa19.02■□□□□ 0.64
GHDC-203ENST00000428494 PTMAP06454 111 aaKnown RBP19.02■□□□□ 0.64
GHDC-203ENST00000428494 UQCRHP07919 91 aa19.02■□□□□ 0.64
GHDC-203ENST00000428494 EIF2S2P20042 333 aaKnown RBP19.02■□□□□ 0.64
GHDC-203ENST00000428494 NLRP6P59044 892 aa19.02■□□□□ 0.64
GHDC-203ENST00000428494 USHBP1Q8N6Y0 703 aa19.02■□□□□ 0.64
GHDC-203ENST00000428494 TNRQ92752 1358 aa19.02■□□□□ 0.64
GHDC-203ENST00000428494 PI4K2BQ8TCG2 481 aa19.02■□□□□ 0.63
GHDC-203ENST00000428494 ZNF830Q96NB3 372 aaPredicted RBP19.02■□□□□ 0.63
GHDC-203ENST00000428494 SNX14Q9Y5W7 946 aa19.02■□□□□ 0.63
GHDC-203ENST00000428494 WDR33Q9C0J8 1336 aaKnown RBP19.01■□□□□ 0.63
GHDC-203ENST00000428494 XRN1Q8IZH2 1706 aaKnown RBP19.01■□□□□ 0.63
GHDC-203ENST00000428494 NBPF7P0C2Y1 421 aaPredicted RBP19.01■□□□□ 0.63
GHDC-203ENST00000428494 HDGFL1Q5TGJ6 251 aa19.01■□□□□ 0.63
GHDC-203ENST00000428494 SPG7Q9UQ90 795 aa19.01■□□□□ 0.63
GHDC-203ENST00000428494 TAF7Q15545 349 aaPredicted RBP19.01■□□□□ 0.63
GHDC-203ENST00000428494 RHPN1Q8TCX5 695 aa19.01■□□□□ 0.63
GHDC-203ENST00000428494 SRGAP3O43295 1099 aa19■□□□□ 0.63
GHDC-203ENST00000428494 CWC27Q6UX04 472 aaKnown RBP19■□□□□ 0.63
GHDC-203ENST00000428494 SYAP1Q96A49 352 aaPredicted RBP19■□□□□ 0.63
GHDC-203ENST00000428494 RPAP1Q9BWH6 1393 aaPredicted RBP19■□□□□ 0.63
GHDC-203ENST00000428494 TOPAZ1Q8N9V7 1692 aa19■□□□□ 0.63
GHDC-203ENST00000428494 PTPRUQ92729 1446 aa19■□□□□ 0.63
GHDC-203ENST00000428494 SGSM2O43147 1006 aa19■□□□□ 0.63
GHDC-203ENST00000428494 TERF1P54274 439 aa19■□□□□ 0.63
GHDC-203ENST00000428494 AK2P54819 239 aa19■□□□□ 0.63
GHDC-203ENST00000428494 IL17RAQ96F46 866 aa19■□□□□ 0.63
GHDC-203ENST00000428494 AMOTL2Q9Y2J4 779 aa19■□□□□ 0.63
GHDC-203ENST00000428494 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19■□□□□ 0.63
GHDC-203ENST00000428494 FMN2Q9NZ56 1722 aa18.99■□□□□ 0.63
GHDC-203ENST00000428494 TTC21AQ8NDW8 1320 aa18.99■□□□□ 0.63
GHDC-203ENST00000428494 HTATSF1O43719 755 aaKnown RBP18.99■□□□□ 0.63
GHDC-203ENST00000428494 ANXA1P04083 346 aa18.98■□□□□ 0.63
GHDC-203ENST00000428494 MCM5P33992 734 aa18.98■□□□□ 0.63
GHDC-203ENST00000428494 PLPPR3Q6T4P5 718 aa18.98■□□□□ 0.63
GHDC-203ENST00000428494 RUFY3Q7L099 469 aa18.98■□□□□ 0.63
GHDC-203ENST00000428494 USP25Q9UHP3 1055 aa18.98■□□□□ 0.63
GHDC-203ENST00000428494 HOXC9P31274 260 aa18.98■□□□□ 0.63
GHDC-203ENST00000428494 TTC14Q96N46 770 aa18.98■□□□□ 0.63
GHDC-203ENST00000428494 LSG1Q9H089 658 aaKnown RBP18.98■□□□□ 0.63
GHDC-203ENST00000428494 DIP2BQ9P265 1576 aa18.98■□□□□ 0.63
GHDC-203ENST00000428494 RAD50Q92878 1312 aa18.97■□□□□ 0.63
GHDC-203ENST00000428494 SYT1P21579 422 aa18.97■□□□□ 0.63
GHDC-203ENST00000428494 ARID3AQ99856 593 aa18.97■□□□□ 0.63
GHDC-203ENST00000428494 FAM208AQ9UK61 1670 aaKnown RBP18.97■□□□□ 0.63
GHDC-203ENST00000428494 LARGE1O95461 756 aa18.97■□□□□ 0.63
GHDC-203ENST00000428494 CEBPAP49715 358 aaPredicted RBP18.97■□□□□ 0.63
GHDC-203ENST00000428494 POLA2Q14181 598 aa18.97■□□□□ 0.63
GHDC-203ENST00000428494 DDX54Q8TDD1 881 aaKnown RBP18.97■□□□□ 0.63
GHDC-203ENST00000428494 ZSCAN22P10073 491 aaPredicted RBP18.96■□□□□ 0.63
GHDC-203ENST00000428494 CSPP1Q1MSJ5 1256 aa18.96■□□□□ 0.63
GHDC-203ENST00000428494 AOX1Q06278 1338 aa18.96■□□□□ 0.63
GHDC-203ENST00000428494 HCLS1P14317 486 aaPredicted RBP18.96■□□□□ 0.63
GHDC-203ENST00000428494 MAP3K5Q99683 1374 aa18.95■□□□□ 0.62
GHDC-203ENST00000428494 RGPD8O14715 1765 aaPredicted RBP18.95■□□□□ 0.62
GHDC-203ENST00000428494 FIBPO43427 364 aa18.95■□□□□ 0.62
GHDC-203ENST00000428494 STX6O43752 255 aa18.95■□□□□ 0.62
GHDC-203ENST00000428494 RAB11FIP3O75154 756 aa18.95■□□□□ 0.62
GHDC-203ENST00000428494 JARID2Q92833 1246 aaPredicted RBP18.95■□□□□ 0.62
GHDC-203ENST00000428494 PI4KAP2A4QPH2 592 aa18.95■□□□□ 0.62
GHDC-203ENST00000428494 PHF14O94880 888 aa18.95■□□□□ 0.62
GHDC-203ENST00000428494 C17orf53Q8N3J3 647 aaPredicted RBP18.95■□□□□ 0.62
GHDC-203ENST00000428494 PI4KAP1Q8N8J0 262 aa18.95■□□□□ 0.62
GHDC-203ENST00000428494 KCNQ3O43525 872 aa18.94■□□□□ 0.62
GHDC-203ENST00000428494 CASTP20810 708 aaKnown RBP18.94■□□□□ 0.62
GHDC-203ENST00000428494 KIF1BPQ96EK5 621 aa18.94■□□□□ 0.62
GHDC-203ENST00000428494 LGR6Q9HBX8 967 aa18.94■□□□□ 0.62
GHDC-203ENST00000428494 CHPF2Q9P2E5 772 aa18.94■□□□□ 0.62
GHDC-203ENST00000428494 LIMCH1Q9UPQ0 1083 aa18.94■□□□□ 0.62
GHDC-203ENST00000428494 TTC12Q9H892 705 aaPredicted RBP18.94■□□□□ 0.62
GHDC-203ENST00000428494 UBR1Q8IWV7 1749 aa18.93■□□□□ 0.62
GHDC-203ENST00000428494 PTH1RQ03431 593 aa18.93■□□□□ 0.62
GHDC-203ENST00000428494 ADCK5Q3MIX3 580 aa18.93■□□□□ 0.62
GHDC-203ENST00000428494 CCDC183Q5T5S1 534 aa18.93■□□□□ 0.62
GHDC-203ENST00000428494 CNTROBQ8N137 903 aa18.93■□□□□ 0.62
GHDC-203ENST00000428494 ADCY5O95622 1261 aa18.93■□□□□ 0.62
GHDC-203ENST00000428494 KIAA2012Q0VF49 1180 aa18.93■□□□□ 0.62
GHDC-203ENST00000428494 CCDC83Q8IWF9 413 aa18.93■□□□□ 0.62
GHDC-203ENST00000428494 SMC3Q9UQE7 1217 aa18.93■□□□□ 0.62
GHDC-203ENST00000428494 TMEM87AQ8NBN3 555 aa18.92■□□□□ 0.62
GHDC-203ENST00000428494 PLEKHG1Q9ULL1 1385 aa18.92■□□□□ 0.62
GHDC-203ENST00000428494 PLCB2Q00722 1185 aa18.92■□□□□ 0.62
GHDC-203ENST00000428494 OS9Q13438 667 aaPredicted RBP18.92■□□□□ 0.62
GHDC-203ENST00000428494 BEND3Q5T5X7 828 aa18.92■□□□□ 0.62
GHDC-203ENST00000428494 GIMAP6Q6P9H5 292 aa18.92■□□□□ 0.62
GHDC-203ENST00000428494 SASS6Q6UVJ0 657 aa18.92■□□□□ 0.62
GHDC-203ENST00000428494 C14orf37Q86TY3 774 aa18.92■□□□□ 0.62
GHDC-203ENST00000428494 ABTB2Q8N961 1025 aa18.92■□□□□ 0.62
GHDC-203ENST00000428494 CACNA1FO60840 1977 aa18.91■□□□□ 0.62
GHDC-203ENST00000428494 F13A1P00488 732 aa18.91■□□□□ 0.62
GHDC-203ENST00000428494 DNTTIP2Q5QJE6 756 aaKnown RBP18.91■□□□□ 0.62
GHDC-203ENST00000428494 SETD1BQ9UPS6 1966 aaKnown RBP18.91■□□□□ 0.62
GHDC-203ENST00000428494 DNM1Q05193 864 aaKnown RBP18.91■□□□□ 0.62
GHDC-203ENST00000428494 HYPKQ9NX55 129 aa18.91■□□□□ 0.62
GHDC-203ENST00000428494 LRRC37A3O60309 1634 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms