RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 ANKLE2Q86XL3 938 aa18.07■□□□□ 0.48
SCAP-206ENST00000428413 RUFY2Q8WXA3 655 aa18.07■□□□□ 0.48
SCAP-206ENST00000428413 PDRG1Q9NUG6 133 aa18.07■□□□□ 0.48
SCAP-206ENST00000428413 DDX58O95786 925 aaKnown RBP18.06■□□□□ 0.48
SCAP-206ENST00000428413 LARP1BQ659C4 914 aaKnown RBP18.06■□□□□ 0.48
SCAP-206ENST00000428413 ANKRD24Q8TF21 1146 aa18.06■□□□□ 0.48
SCAP-206ENST00000428413 MLH3Q9UHC1 1453 aa18.06■□□□□ 0.48
SCAP-206ENST00000428413 HCLS1P14317 486 aaPredicted RBP18.06■□□□□ 0.48
SCAP-206ENST00000428413 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
SCAP-206ENST00000428413 TPM2P07951 284 aa18.05■□□□□ 0.48
SCAP-206ENST00000428413 KLHL40Q2TBA0 621 aa18.05■□□□□ 0.48
SCAP-206ENST00000428413 CHST3Q7LGC8 479 aa18.05■□□□□ 0.48
SCAP-206ENST00000428413 C17orf53Q8N3J3 647 aaPredicted RBP18.05■□□□□ 0.48
SCAP-206ENST00000428413 SOS1Q07889 1333 aaPredicted RBP18.05■□□□□ 0.48
SCAP-206ENST00000428413 RAB11FIP3O75154 756 aa18.05■□□□□ 0.48
SCAP-206ENST00000428413 APPP05067 770 aa18.05■□□□□ 0.48
SCAP-206ENST00000428413 FKBP4Q02790 459 aaKnown RBP eCLIP18.05■□□□□ 0.48
SCAP-206ENST00000428413 WASHC4Q2M389 1173 aa18.05■□□□□ 0.48
SCAP-206ENST00000428413 ZNF592Q92610 1267 aa18.05■□□□□ 0.48
SCAP-206ENST00000428413 ZHX1Q9UKY1 873 aaPredicted RBP18.05■□□□□ 0.48
SCAP-206ENST00000428413 CLASP1Q7Z460 1538 aa18.05■□□□□ 0.48
SCAP-206ENST00000428413 HSP90AB3PQ58FF7 597 aa18.05■□□□□ 0.48
SCAP-206ENST00000428413 DDX46Q7L014 1031 aaKnown RBP18.05■□□□□ 0.48
SCAP-206ENST00000428413 COPS6Q7L5N1 327 aa18.05■□□□□ 0.48
SCAP-206ENST00000428413 FMNL2Q96PY5 1086 aa18.05■□□□□ 0.48
SCAP-206ENST00000428413 CWC22Q9HCG8 908 aaKnown RBP18.05■□□□□ 0.48
SCAP-206ENST00000428413 USP48Q86UV5 1035 aa18.04■□□□□ 0.48
SCAP-206ENST00000428413 FAM227BQ96M60 508 aa18.04■□□□□ 0.48
SCAP-206ENST00000428413 TSPY26PQ9H489 355 aa18.04■□□□□ 0.48
SCAP-206ENST00000428413 TMEM63CQ9P1W3 806 aa18.04■□□□□ 0.48
SCAP-206ENST00000428413 CYP46A1Q9Y6A2 500 aa18.04■□□□□ 0.48
SCAP-206ENST00000428413 QRICH2Q9H0J4 1663 aa18.04■□□□□ 0.48
SCAP-206ENST00000428413 EVA1CP58658 441 aa18.03■□□□□ 0.48
SCAP-206ENST00000428413 ZFYVE9O95405 1425 aa18.03■□□□□ 0.48
SCAP-206ENST00000428413 AK2P54819 239 aa18.03■□□□□ 0.48
SCAP-206ENST00000428413 IQGAP1P46940 1657 aa18.03■□□□□ 0.48
SCAP-206ENST00000428413 ATF3P18847 181 aa18.03■□□□□ 0.48
SCAP-206ENST00000428413 FLT4P35916 1363 aa18.02■□□□□ 0.48
SCAP-206ENST00000428413 CCDC173Q0VFZ6 552 aa18.02■□□□□ 0.48
SCAP-206ENST00000428413 XAGE3Q8WTP9 111 aa18.02■□□□□ 0.48
SCAP-206ENST00000428413 IL25Q9H293 177 aa18.02■□□□□ 0.48
SCAP-206ENST00000428413 FAM135BQ49AJ0 1406 aa18.02■□□□□ 0.48
SCAP-206ENST00000428413 CCT2P78371 535 aaKnown RBP18.02■□□□□ 0.47
SCAP-206ENST00000428413 DNM1Q05193 864 aaKnown RBP18.02■□□□□ 0.47
SCAP-206ENST00000428413 RASEFQ8IZ41 740 aa18.02■□□□□ 0.47
SCAP-206ENST00000428413 GCP02774 474 aa18.01■□□□□ 0.47
SCAP-206ENST00000428413 GJB2P29033 226 aa18.01■□□□□ 0.47
SCAP-206ENST00000428413 CCDC129Q6ZRS4 1044 aa18.01■□□□□ 0.47
SCAP-206ENST00000428413 KIDINS220Q9ULH0 1771 aa18.01■□□□□ 0.47
SCAP-206ENST00000428413 MROH2AA6NES4 1674 aa18.01■□□□□ 0.47
SCAP-206ENST00000428413 LMBRD1Q9NUN5 540 aa18.01■□□□□ 0.47
SCAP-206ENST00000428413 DBF4Q9UBU7 674 aaPredicted RBP18.01■□□□□ 0.47
SCAP-206ENST00000428413 ERBB4Q15303 1308 aa18.01■□□□□ 0.47
SCAP-206ENST00000428413 GPT2Q8TD30 523 aa18■□□□□ 0.47
SCAP-206ENST00000428413 CABP4P57796 275 aa18■□□□□ 0.47
SCAP-206ENST00000428413 HSP90AB4PQ58FF6 505 aa18■□□□□ 0.47
SCAP-206ENST00000428413 TTC12Q9H892 705 aaPredicted RBP18■□□□□ 0.47
SCAP-206ENST00000428413 ADGRB3O60242 1522 aa18■□□□□ 0.47
SCAP-206ENST00000428413 LRRC7Q96NW7 1537 aa18■□□□□ 0.47
SCAP-206ENST00000428413 A0A087WZG4 1122 aa18■□□□□ 0.47
SCAP-206ENST00000428413 GNL2Q13823 731 aaKnown RBP18■□□□□ 0.47
SCAP-206ENST00000428413 TOM1L2Q6ZVM7 507 aa18■□□□□ 0.47
SCAP-206ENST00000428413 KRT28Q7Z3Y7 464 aa18■□□□□ 0.47
SCAP-206ENST00000428413 ATP2B1P20020 1258 aa17.99■□□□□ 0.47
SCAP-206ENST00000428413 HAND2P61296 217 aa17.99■□□□□ 0.47
SCAP-206ENST00000428413 CHGBP05060 677 aa17.99■□□□□ 0.47
SCAP-206ENST00000428413 WDR33Q9C0J8 1336 aaKnown RBP17.99■□□□□ 0.47
SCAP-206ENST00000428413 NPHP1O15259 732 aa17.99■□□□□ 0.47
SCAP-206ENST00000428413 GLRX3O76003 335 aaKnown RBP17.99■□□□□ 0.47
SCAP-206ENST00000428413 SF3A1Q15459 793 aaKnown RBP17.99■□□□□ 0.47
SCAP-206ENST00000428413 SLFNL1Q499Z3 407 aa17.99■□□□□ 0.47
SCAP-206ENST00000428413 BLOC1S2Q6QNY1 142 aa17.99■□□□□ 0.47
SCAP-206ENST00000428413 TSC1Q92574 1164 aa17.99■□□□□ 0.47
SCAP-206ENST00000428413 BICC1Q9H694 974 aaKnown RBP17.99■□□□□ 0.47
SCAP-206ENST00000428413 ECHDC1Q9NTX5 307 aa17.99■□□□□ 0.47
SCAP-206ENST00000428413 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.99■□□□□ 0.47
SCAP-206ENST00000428413 PTH1RQ03431 593 aa17.98■□□□□ 0.47
SCAP-206ENST00000428413 PIK3R4Q99570 1358 aa17.98■□□□□ 0.47
SCAP-206ENST00000428413 TATP17735 454 aaPredicted RBP17.98■□□□□ 0.47
SCAP-206ENST00000428413 ZSCAN30Q86W11 494 aa17.98■□□□□ 0.47
SCAP-206ENST00000428413 PRDM10Q9NQV6 1147 aa17.98■□□□□ 0.47
SCAP-206ENST00000428413 TMEM2Q9UHN6 1383 aa17.98■□□□□ 0.47
SCAP-206ENST00000428413 ADGRB1O14514 1584 aa17.98■□□□□ 0.47
SCAP-206ENST00000428413 CREBRFQ8IUR6 639 aa17.98■□□□□ 0.47
SCAP-206ENST00000428413 ADCK5Q3MIX3 580 aa17.97■□□□□ 0.47
SCAP-206ENST00000428413 PLEKHG3A1L390 1219 aa17.97■□□□□ 0.47
SCAP-206ENST00000428413 STX6O43752 255 aa17.97■□□□□ 0.47
SCAP-206ENST00000428413 TLR7Q9NYK1 1049 aaKnown RBP17.97■□□□□ 0.47
SCAP-206ENST00000428413 MBD3O95983 291 aa17.96■□□□□ 0.47
SCAP-206ENST00000428413 GPTP24298 496 aa17.96■□□□□ 0.47
SCAP-206ENST00000428413 LIMCH1Q9UPQ0 1083 aa17.96■□□□□ 0.47
SCAP-206ENST00000428413 HSPA2P54652 639 aa17.96■□□□□ 0.47
SCAP-206ENST00000428413 NMIQ13287 307 aaPredicted RBP17.96■□□□□ 0.47
SCAP-206ENST00000428413 RBM8AQ9Y5S9 174 aaKnown RBP17.96■□□□□ 0.47
SCAP-206ENST00000428413 HECW2Q9P2P5 1572 aa17.96■□□□□ 0.47
SCAP-206ENST00000428413 PNPLA6Q8IY17 1366 aa17.95■□□□□ 0.46
SCAP-206ENST00000428413 PTPRMP28827 1452 aa17.95■□□□□ 0.46
SCAP-206ENST00000428413 IQSEC2Q5JU85 1478 aa17.95■□□□□ 0.46
SCAP-206ENST00000428413 PHF14O94880 888 aa17.95■□□□□ 0.46
SCAP-206ENST00000428413 TIMM10P62072 90 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms