RNA–Protein interactions for RNA: ENST00000427786.1

PPP1CB-206, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 4

Gene PPP1CB, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-206ENST00000427786 MCM10Q7L590 875 aa26.08■■□□□ 1.77
PPP1CB-206ENST00000427786 KCNQ3O43525 872 aa26.07■■□□□ 1.76
PPP1CB-206ENST00000427786 FKBP8Q14318 412 aa26.07■■□□□ 1.76
PPP1CB-206ENST00000427786 NRXN2Q9P2S2 1712 aa26.07■■□□□ 1.76
PPP1CB-206ENST00000427786 DCTN1Q14203 1278 aa26.06■■□□□ 1.76
PPP1CB-206ENST00000427786 MYBBP1AQ9BQG0 1328 aaKnown RBP26.06■■□□□ 1.76
PPP1CB-206ENST00000427786 BTBD11A6QL63 1104 aa26.05■■□□□ 1.76
PPP1CB-206ENST00000427786 PELP1Q8IZL8 1130 aaKnown RBP26.05■■□□□ 1.76
PPP1CB-206ENST00000427786 FMNL2Q96PY5 1086 aa26.05■■□□□ 1.76
PPP1CB-206ENST00000427786 DDR1Q08345 913 aa26.04■■□□□ 1.76
PPP1CB-206ENST00000427786 RTF1Q92541 710 aaKnown RBP26.04■■□□□ 1.76
PPP1CB-206ENST00000427786 LAMB4A4D0S4 1761 aa26.04■■□□□ 1.76
PPP1CB-206ENST00000427786 AFDNP55196 1824 aaKnown RBP26.04■■□□□ 1.76
PPP1CB-206ENST00000427786 BCORQ6W2J9 1755 aa26.02■■□□□ 1.76
PPP1CB-206ENST00000427786 STARD3NLO95772 234 aa26.02■■□□□ 1.76
PPP1CB-206ENST00000427786 EIF5P55010 431 aaKnown RBP26.02■■□□□ 1.76
PPP1CB-206ENST00000427786 USPL1Q5W0Q7 1092 aa26.02■■□□□ 1.76
PPP1CB-206ENST00000427786 BCL2L12Q9HB09 334 aa26.02■■□□□ 1.76
PPP1CB-206ENST00000427786 NARFQ9UHQ1 456 aa26.02■■□□□ 1.76
PPP1CB-206ENST00000427786 TM4SF1P30408 202 aa26.01■■□□□ 1.75
PPP1CB-206ENST00000427786 TEX13AQ9BXU3 409 aaPredicted RBP26.01■■□□□ 1.75
PPP1CB-206ENST00000427786 GRIN3BO60391 1043 aa26■■□□□ 1.75
PPP1CB-206ENST00000427786 NFE2L2Q16236 605 aa26■■□□□ 1.75
PPP1CB-206ENST00000427786 PARP3Q9Y6F1 533 aa26■■□□□ 1.75
PPP1CB-206ENST00000427786 POLRMTO00411 1230 aaKnown RBP25.99■■□□□ 1.75
PPP1CB-206ENST00000427786 CANXP27824 592 aaKnown RBP25.99■■□□□ 1.75
PPP1CB-206ENST00000427786 ZPR1O75312 459 aa25.98■■□□□ 1.75
PPP1CB-206ENST00000427786 TGFB2P61812 414 aa25.98■■□□□ 1.75
PPP1CB-206ENST00000427786 NEFMP07197 916 aa25.97■■□□□ 1.75
PPP1CB-206ENST00000427786 ZNF784Q8NCA9 323 aaPredicted RBP25.97■■□□□ 1.75
PPP1CB-206ENST00000427786 PRAMEF22A3QJZ6 481 aa25.96■■□□□ 1.75
PPP1CB-206ENST00000427786 IL6STP40189 918 aaPredicted RBP25.96■■□□□ 1.75
PPP1CB-206ENST00000427786 PNNQ9H307 717 aaKnown RBP25.96■■□□□ 1.75
PPP1CB-206ENST00000427786 ARFGEF1Q9Y6D6 1849 aa25.95■■□□□ 1.75
PPP1CB-206ENST00000427786 NFIXQ14938 502 aa25.95■■□□□ 1.74
PPP1CB-206ENST00000427786 TAF7Q15545 349 aaPredicted RBP25.95■■□□□ 1.74
PPP1CB-206ENST00000427786 PRKRIP1Q9H875 184 aaPredicted RBP25.95■■□□□ 1.74
PPP1CB-206ENST00000427786 USP16Q9Y5T5 823 aa25.95■■□□□ 1.74
PPP1CB-206ENST00000427786 DLEC1Q9Y238 1755 aa25.95■■□□□ 1.74
PPP1CB-206ENST00000427786 MAPK8IP3Q9UPT6 1336 aa25.94■■□□□ 1.74
PPP1CB-206ENST00000427786 A1BGP04217 495 aa25.94■■□□□ 1.74
PPP1CB-206ENST00000427786 ZEB1P37275 1124 aaPredicted RBP25.94■■□□□ 1.74
PPP1CB-206ENST00000427786 WWC3Q9ULE0 1092 aa25.93■■□□□ 1.74
PPP1CB-206ENST00000427786 A0A087WZG4 1122 aa25.92■■□□□ 1.74
PPP1CB-206ENST00000427786 A0A0G2JLW4 131 aa25.92■■□□□ 1.74
PPP1CB-206ENST00000427786 SNRPA1P09661 255 aaKnown RBP25.92■■□□□ 1.74
PPP1CB-206ENST00000427786 KCNA3P22001 575 aa25.92■■□□□ 1.74
PPP1CB-206ENST00000427786 THUMPD2Q9BTF0 503 aaKnown RBP25.92■■□□□ 1.74
PPP1CB-206ENST00000427786 ADCY9O60503 1353 aa25.92■■□□□ 1.74
PPP1CB-206ENST00000427786 DPEP1P16444 411 aa25.91■■□□□ 1.74
PPP1CB-206ENST00000427786 MIS18AQ9NYP9 233 aa25.9■■□□□ 1.74
PPP1CB-206ENST00000427786 ANKRD31Q8N7Z5 1873 aa25.89■■□□□ 1.74
PPP1CB-206ENST00000427786 PNISRQ8TF01 805 aaKnown RBP25.89■■□□□ 1.74
PPP1CB-206ENST00000427786 CAMTA2O94983 1202 aa25.88■■□□□ 1.73
PPP1CB-206ENST00000427786 CARMIL3Q8ND23 1372 aa25.87■■□□□ 1.73
PPP1CB-206ENST00000427786 TBC1D2BQ9UPU7 963 aa25.87■■□□□ 1.73
PPP1CB-206ENST00000427786 NBPF26B4DH59 902 aa25.86■■□□□ 1.73
PPP1CB-206ENST00000427786 TMPOP42166 694 aaKnown RBP25.86■■□□□ 1.73
PPP1CB-206ENST00000427786 PIP4K2AP48426 406 aaPredicted RBP25.86■■□□□ 1.73
PPP1CB-206ENST00000427786 TBC1D9BQ66K14 1250 aa25.86■■□□□ 1.73
PPP1CB-206ENST00000427786 NBPF10Q6P3W6 841 aaKnown RBP25.86■■□□□ 1.73
PPP1CB-206ENST00000427786 NBPF15Q8N660 670 aa25.86■■□□□ 1.73
PPP1CB-206ENST00000427786 SERPINB2P05120 415 aa25.85■■□□□ 1.73
PPP1CB-206ENST00000427786 EIF4A1P60842 406 aaKnown RBP25.85■■□□□ 1.73
PPP1CB-206ENST00000427786 ZNF330Q9Y3S2 320 aaPredicted RBP25.85■■□□□ 1.73
PPP1CB-206ENST00000427786 GIGYF1O75420 1035 aaPredicted RBP25.84■■□□□ 1.73
PPP1CB-206ENST00000427786 COL11A2P13942 1736 aaPredicted RBP25.84■■□□□ 1.73
PPP1CB-206ENST00000427786 RIPK4P57078 832 aa25.84■■□□□ 1.73
PPP1CB-206ENST00000427786 DZIP3Q86Y13 1208 aaKnown RBP25.83■■□□□ 1.73
PPP1CB-206ENST00000427786 BCS1LQ9Y276 419 aa25.83■■□□□ 1.73
PPP1CB-206ENST00000427786 CHRNA5P30532 468 aa25.82■■□□□ 1.72
PPP1CB-206ENST00000427786 CCDC146Q8IYE0 955 aa25.82■■□□□ 1.72
PPP1CB-206ENST00000427786 ATP10DQ9P241 1426 aa25.81■■□□□ 1.72
PPP1CB-206ENST00000427786 RUNDC1Q96C34 613 aa25.81■■□□□ 1.72
PPP1CB-206ENST00000427786 ADAMTS8Q9UP79 889 aa25.81■■□□□ 1.72
PPP1CB-206ENST00000427786 LMOD3Q0VAK6 560 aa25.8■■□□□ 1.72
PPP1CB-206ENST00000427786 WDR43Q15061 677 aaKnown RBP eCLIP25.8■■□□□ 1.72
PPP1CB-206ENST00000427786 BICDL1Q6ZP65 573 aa25.8■■□□□ 1.72
PPP1CB-206ENST00000427786 PIM2Q9P1W9 311 aa25.8■■□□□ 1.72
PPP1CB-206ENST00000427786 RRP7AQ9Y3A4 280 aaKnown RBP25.79■■□□□ 1.72
PPP1CB-206ENST00000427786 RGL2O15211 777 aa25.78■■□□□ 1.72
PPP1CB-206ENST00000427786 BABAM1Q9NWV8 329 aa25.78■■□□□ 1.72
PPP1CB-206ENST00000427786 TRIM35Q9UPQ4 493 aa25.78■■□□□ 1.72
PPP1CB-206ENST00000427786 PRR5LQ6MZQ0 368 aa25.77■■□□□ 1.72
PPP1CB-206ENST00000427786 CLEC4GQ6UXB4 293 aa25.76■■□□□ 1.71
PPP1CB-206ENST00000427786 NPM2Q86SE8 214 aaKnown RBP25.76■■□□□ 1.71
PPP1CB-206ENST00000427786 TSPYL4Q9UJ04 414 aa25.76■■□□□ 1.71
PPP1CB-206ENST00000427786 NUP98P52948 1817 aa25.75■■□□□ 1.71
PPP1CB-206ENST00000427786 DALRD3Q5D0E6 543 aaKnown RBP25.75■■□□□ 1.71
PPP1CB-206ENST00000427786 ARFGEF2Q9Y6D5 1785 aa25.74■■□□□ 1.71
PPP1CB-206ENST00000427786 SBF1O95248 1867 aa25.73■■□□□ 1.71
PPP1CB-206ENST00000427786 SETDB2Q96T68 719 aa25.73■■□□□ 1.71
PPP1CB-206ENST00000427786 ERBB4Q15303 1308 aa25.72■■□□□ 1.71
PPP1CB-206ENST00000427786 BRIP1Q9BX63 1249 aa25.72■■□□□ 1.71
PPP1CB-206ENST00000427786 ZNF316A6NFI3 1004 aaPredicted RBP25.71■■□□□ 1.71
PPP1CB-206ENST00000427786 NEUROD2Q15784 382 aa25.71■■□□□ 1.71
PPP1CB-206ENST00000427786 LRP10Q7Z4F1 713 aa25.71■■□□□ 1.71
PPP1CB-206ENST00000427786 ZNF652Q9Y2D9 606 aa25.71■■□□□ 1.71
PPP1CB-206ENST00000427786 CHL1O00533 1208 aa25.7■■□□□ 1.7
PPP1CB-206ENST00000427786 HLFQ16534 295 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms