RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CLTCL1P53675 1640 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 ABCC5O15440 1437 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 PDS5BQ9NTI5 1447 aa6.67□□□□□ -1.34
VTI1BP4-201ENST00000427516 PLB1Q6P1J6 1458 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 ERICH4A6NGS2 130 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 EPB41L2O43491 1005 aaKnown RBP6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 BCAR3O75815 825 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 SLU7O95391 586 aaKnown RBP6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 ZNF853P0CG23 659 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 CCDC192P0DO97 292 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 ERCC3P19447 782 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 MAGEA9P43362 315 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 NOP2P46087 812 aaKnown RBP6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 PDIA6Q15084 440 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 E2F4Q16254 413 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 PROX2Q3B8N5 592 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 C6orf132Q5T0Z8 1188 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 TMCO3Q6UWJ1 677 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 DHX37Q8IY37 1157 aaKnown RBP6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 IQUBQ8NA54 791 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 TMEM87AQ8NBN3 555 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 DDX12PQ92771 950 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 DDX11Q96FC9 970 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 CEP89Q96ST8 783 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 PLCD4Q9BRC7 762 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 ACBD3Q9H3P7 528 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 JRKLQ9Y4A0 524 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 LRRIQ1Q96JM4 1722 aa6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 POLR3AO14802 1390 aaPredicted RBP6.66□□□□□ -1.34
VTI1BP4-201ENST00000427516 EIF3JO75822 258 aaKnown RBP6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 NEFHP12036 1026 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 TNNT1P13805 278 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 CAPN2P17655 700 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 ATP2B1P20020 1258 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 MX1P20591 662 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 HNRNPH2P55795 449 aaKnown RBP6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 TPD52L1Q16890 204 aaPredicted RBP6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 CEP135Q66GS9 1140 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 CHD1LQ86WJ1 897 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 TICAM2Q86XR7 235 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 ANKRD20A12PQ8NF67 263 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 PANK1Q8TE04 598 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 EXOC4Q96A65 974 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 CFAP53Q96M91 514 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 IFT57Q9NWB7 429 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 TMEM63CQ9P1W3 806 aa6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 ARIH1Q9Y4X5 557 aaPredicted RBP6.65□□□□□ -1.34
VTI1BP4-201ENST00000427516 ANKRD50Q9ULJ7 1429 aa6.65□□□□□ -1.35
VTI1BP4-201ENST00000427516 ATP10AO60312 1499 aa6.65□□□□□ -1.35
VTI1BP4-201ENST00000427516 RNF17Q9BXT8 1623 aaKnown RBP6.65□□□□□ -1.35
VTI1BP4-201ENST00000427516 SPDYE16A6NNV3 312 aaPredicted RBP6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 TMCO5BA8MYB1 307 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 MYO1CO00159 1063 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 PPP1R12AO14974 1030 aaPredicted RBP6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 TUBBP07437 444 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 CDC25BP30305 580 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 MAP2K2P36507 400 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 UBE2HP62256 183 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 PTPN14Q15678 1187 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 ZSCAN26Q16670 478 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 MCTP2Q6DN12 878 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 C14orf37Q86TY3 774 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 ERC1Q8IUD2 1116 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 EFCAB13Q8IY85 973 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 MRPL50Q8N5N7 158 aaKnown RBP6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 CCDC191Q8NCU4 936 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 RNF214Q8ND24 703 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 GAS2L2Q8NHY3 880 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 GPT2Q8TD30 523 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 KCND1Q9NSA2 647 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 RABGEF1Q9UJ41 708 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 CCDC9Q9Y3X0 531 aaKnown RBP6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 PCDHB15Q9Y5E8 787 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 LRRFIP2Q9Y608 721 aaKnown RBP6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 PTPRCP08575 1304 aa6.64□□□□□ -1.35
VTI1BP4-201ENST00000427516 PES1O00541 588 aaKnown RBP6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 APAF1O14727 1248 aa6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 KDM5AP29375 1690 aaKnown RBP6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 GSDMDP57764 484 aa6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 ANAPC15P60006 121 aa6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 TTLL5Q6EMB2 1281 aa6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 DNMBPQ6XZF7 1577 aa6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 KRBA2Q6ZNG9 492 aa6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 SRLQ86TD4 932 aa6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 FMNL3Q8IVF7 1028 aa6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 FBXO18Q8NFZ0 1043 aa6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 RUNDC1Q96C34 613 aa6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 RBM33Q96EV2 1170 aaKnown RBP6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 WDR70Q9NW82 654 aa6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 PLA2G2EQ9NZK7 142 aa6.63□□□□□ -1.35
VTI1BP4-201ENST00000427516 CDK13Q14004 1512 aaKnown RBP6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 SSH2Q76I76 1423 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 CADPSQ9ULU8 1353 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 SPAG9O60271 1321 aaKnown RBP6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 IL16Q14005 1332 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 GOLIM4O00461 696 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 BRD1O95696 1058 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 KCNJ6P48051 423 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms