RNA–Protein interactions for RNA: ENST00000427463.5

PCGF3-204, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-204ENST00000427463 TTC5Q8N0Z6 440 aa28.21■■■□□ 2.11
PCGF3-204ENST00000427463 PHACTR3Q96KR7 559 aa28.21■■■□□ 2.11
PCGF3-204ENST00000427463 CEMIPQ8WUJ3 1361 aa28.21■■■□□ 2.11
PCGF3-204ENST00000427463 ZPR1O75312 459 aa28.2■■■□□ 2.1
PCGF3-204ENST00000427463 NRXN2Q9P2S2 1712 aa28.2■■■□□ 2.1
PCGF3-204ENST00000427463 BCS1LQ9Y276 419 aa28.19■■■□□ 2.1
PCGF3-204ENST00000427463 POLRMTO00411 1230 aaKnown RBP28.18■■■□□ 2.1
PCGF3-204ENST00000427463 TM4SF1P30408 202 aa28.18■■■□□ 2.1
PCGF3-204ENST00000427463 ZNF790Q6PG37 636 aa28.18■■■□□ 2.1
PCGF3-204ENST00000427463 ZNF496Q96IT1 587 aaPredicted RBP28.18■■■□□ 2.1
PCGF3-204ENST00000427463 NUDCQ9Y266 331 aa28.18■■■□□ 2.1
PCGF3-204ENST00000427463 KCNA3P22001 575 aa28.17■■■□□ 2.1
PCGF3-204ENST00000427463 NARFQ9UHQ1 456 aa28.17■■■□□ 2.1
PCGF3-204ENST00000427463 HEG1Q9ULI3 1381 aa28.16■■■□□ 2.1
PCGF3-204ENST00000427463 SCN7AQ01118 1682 aa28.16■■■□□ 2.1
PCGF3-204ENST00000427463 U2AF1L5P0DN76 240 aaPredicted RBP28.15■■■□□ 2.1
PCGF3-204ENST00000427463 U2AF1Q01081 240 aaKnown RBP eCLIP28.15■■■□□ 2.13e-6■□□□□ 10.4
PCGF3-204ENST00000427463 SENP3-EIF4A1A0A087X0R7 540 aa28.14■■■□□ 2.1
PCGF3-204ENST00000427463 STARD3NLO95772 234 aa28.14■■■□□ 2.1
PCGF3-204ENST00000427463 GPBP1L1Q9HC44 474 aaPredicted RBP28.14■■■□□ 2.1
PCGF3-204ENST00000427463 FCHSD2O94868 740 aa28.13■■■□□ 2.09
PCGF3-204ENST00000427463 CANXP27824 592 aaKnown RBP28.13■■■□□ 2.09
PCGF3-204ENST00000427463 NFIXQ14938 502 aa28.13■■■□□ 2.09
PCGF3-204ENST00000427463 BCL2L12Q9HB09 334 aa28.13■■■□□ 2.09
PCGF3-204ENST00000427463 DLEC1Q9Y238 1755 aa28.13■■■□□ 2.09
PCGF3-204ENST00000427463 ZNF526Q8TF50 670 aaPredicted RBP28.12■■■□□ 2.09
PCGF3-204ENST00000427463 EIF5P55010 431 aaKnown RBP28.11■■■□□ 2.09
PCGF3-204ENST00000427463 DLG5Q8TDM6 1919 aa28.11■■■□□ 2.09
PCGF3-204ENST00000427463 PIM2Q9P1W9 311 aa28.1■■■□□ 2.09
PCGF3-204ENST00000427463 FMNL2Q96PY5 1086 aa28.09■■■□□ 2.09
PCGF3-204ENST00000427463 TEX13AQ9BXU3 409 aaPredicted RBP28.09■■■□□ 2.09
PCGF3-204ENST00000427463 CEP350Q5VT06 3117 aa28.08■■■□□ 2.09
PCGF3-204ENST00000427463 BTBD11A6QL63 1104 aa28.08■■■□□ 2.09
PCGF3-204ENST00000427463 KCNQ3O43525 872 aa28.08■■■□□ 2.09
PCGF3-204ENST00000427463 CHRNA5P30532 468 aa28.08■■■□□ 2.09
PCGF3-204ENST00000427463 ARHGAP27Q6ZUM4 889 aa28.08■■■□□ 2.09
PCGF3-204ENST00000427463 BCORQ6W2J9 1755 aa28.07■■■□□ 2.08
PCGF3-204ENST00000427463 SBF1O95248 1867 aa28.07■■■□□ 2.08
PCGF3-204ENST00000427463 ANKRD31Q8N7Z5 1873 aa28.06■■■□□ 2.08
PCGF3-204ENST00000427463 A0A087WZG4 1122 aa28.05■■■□□ 2.08
PCGF3-204ENST00000427463 DALRD3Q5D0E6 543 aaKnown RBP28.05■■■□□ 2.08
PCGF3-204ENST00000427463 MCM10Q7L590 875 aa28.05■■■□□ 2.08
PCGF3-204ENST00000427463 SERPINB2P05120 415 aa28.04■■■□□ 2.08
PCGF3-204ENST00000427463 RTF1Q92541 710 aaKnown RBP28.04■■■□□ 2.08
PCGF3-204ENST00000427463 IL6STP40189 918 aaPredicted RBP28.03■■■□□ 2.08
PCGF3-204ENST00000427463 CARMIL3Q8ND23 1372 aa28.02■■■□□ 2.08
PCGF3-204ENST00000427463 A1BGP04217 495 aa28.02■■■□□ 2.08
PCGF3-204ENST00000427463 ZNF330Q9Y3S2 320 aaPredicted RBP28.02■■■□□ 2.08
PCGF3-204ENST00000427463 DCTN1Q14203 1278 aa28.01■■■□□ 2.07
PCGF3-204ENST00000427463 HTATSF1O43719 755 aaKnown RBP28■■■□□ 2.07
PCGF3-204ENST00000427463 BICDL1Q6ZP65 573 aa28■■■□□ 2.07
PCGF3-204ENST00000427463 TBC1D2BQ9UPU7 963 aa28■■■□□ 2.07
PCGF3-204ENST00000427463 LAMB4A4D0S4 1761 aa27.99■■■□□ 2.07
PCGF3-204ENST00000427463 TBC1D9BQ66K14 1250 aa27.99■■■□□ 2.07
PCGF3-204ENST00000427463 COL11A2P13942 1736 aaPredicted RBP27.98■■■□□ 2.07
PCGF3-204ENST00000427463 KIF3CO14782 793 aa27.98■■■□□ 2.07
PCGF3-204ENST00000427463 USP16Q9Y5T5 823 aa27.98■■■□□ 2.07
PCGF3-204ENST00000427463 KDM3BQ7LBC6 1761 aa27.98■■■□□ 2.07
PCGF3-204ENST00000427463 PRAMEF22A3QJZ6 481 aa27.97■■■□□ 2.07
PCGF3-204ENST00000427463 C9orf131Q5VYM1 1079 aa27.97■■■□□ 2.07
PCGF3-204ENST00000427463 CCDC88AQ3V6T2 1871 aa27.95■■■□□ 2.07
PCGF3-204ENST00000427463 CAMTA2O94983 1202 aa27.95■■■□□ 2.06
PCGF3-204ENST00000427463 SNRPA1P09661 255 aaKnown RBP27.94■■■□□ 2.06
PCGF3-204ENST00000427463 PIP4K2AP48426 406 aaPredicted RBP27.93■■■□□ 2.06
PCGF3-204ENST00000427463 NPM2Q86SE8 214 aaKnown RBP27.93■■■□□ 2.06
PCGF3-204ENST00000427463 C2CD5Q86YS7 1000 aa27.93■■■□□ 2.06
PCGF3-204ENST00000427463 PLEKHF1Q96S99 279 aa27.93■■■□□ 2.06
PCGF3-204ENST00000427463 DZIP3Q86Y13 1208 aaKnown RBP27.92■■■□□ 2.06
PCGF3-204ENST00000427463 CACNA1SQ13698 1873 aa27.91■■■□□ 2.06
PCGF3-204ENST00000427463 NEFMP07197 916 aa27.91■■■□□ 2.06
PCGF3-204ENST00000427463 TAF7Q15545 349 aaPredicted RBP27.91■■■□□ 2.06
PCGF3-204ENST00000427463 PRR5LQ6MZQ0 368 aa27.91■■■□□ 2.06
PCGF3-204ENST00000427463 RNF181Q9P0P0 153 aa27.91■■■□□ 2.06
PCGF3-204ENST00000427463 H0YIN7 160 aa27.9■■■□□ 2.06
PCGF3-204ENST00000427463 TTLL6Q8N841 843 aa27.9■■■□□ 2.06
PCGF3-204ENST00000427463 NMRK2Q9NPI5 230 aa27.89■■■□□ 2.06
PCGF3-204ENST00000427463 TNRC6CQ9HCJ0 1690 aaKnown RBP27.88■■■□□ 2.05
PCGF3-204ENST00000427463 RASSF7Q02833 373 aa27.88■■■□□ 2.05
PCGF3-204ENST00000427463 TIAM2Q8IVF5 1701 aa27.88■■■□□ 2.05
PCGF3-204ENST00000427463 SETDB2Q96T68 719 aa27.88■■■□□ 2.05
PCGF3-204ENST00000427463 BRIP1Q9BX63 1249 aa27.88■■■□□ 2.05
PCGF3-204ENST00000427463 MIS18AQ9NYP9 233 aa27.88■■■□□ 2.05
PCGF3-204ENST00000427463 ARFGEF2Q9Y6D5 1785 aa27.88■■■□□ 2.05
PCGF3-204ENST00000427463 NBPF26B4DH59 902 aa27.87■■■□□ 2.05
PCGF3-204ENST00000427463 HSPA6P17066 643 aa27.87■■■□□ 2.05
PCGF3-204ENST00000427463 NFE2L2Q16236 605 aa27.87■■■□□ 2.05
PCGF3-204ENST00000427463 NBPF10Q6P3W6 841 aaKnown RBP27.87■■■□□ 2.05
PCGF3-204ENST00000427463 CCDC24Q8N4L8 307 aa27.87■■■□□ 2.05
PCGF3-204ENST00000427463 NBPF15Q8N660 670 aa27.87■■■□□ 2.05
PCGF3-204ENST00000427463 FER1L6Q2WGJ9 1857 aa27.87■■■□□ 2.05
PCGF3-204ENST00000427463 PDE6BP35913 854 aa27.86■■■□□ 2.05
PCGF3-204ENST00000427463 CNBD1Q8NA66 436 aa27.86■■■□□ 2.05
PCGF3-204ENST00000427463 PDZRN3Q9UPQ7 1066 aa27.85■■■□□ 2.05
PCGF3-204ENST00000427463 SLX4Q8IY92 1834 aa27.84■■■□□ 2.05
PCGF3-204ENST00000427463 CLEC4GQ6UXB4 293 aa27.84■■■□□ 2.05
PCGF3-204ENST00000427463 DICER1Q9UPY3 1922 aaKnown RBP27.83■■■□□ 2.05
PCGF3-204ENST00000427463 PRELPP51888 382 aa27.83■■■□□ 2.05
PCGF3-204ENST00000427463 RALBP1Q15311 655 aa27.83■■■□□ 2.05
PCGF3-204ENST00000427463 PNISRQ8TF01 805 aaKnown RBP27.83■■■□□ 2.05
PCGF3-204ENST00000427463 THUMPD2Q9BTF0 503 aaKnown RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms