RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 ZNF526Q8TF50 670 aaPredicted RBP14.58□□□□□ -0.07
HDLBP-214ENST00000427183 SCLT1Q96NL6 688 aa14.58□□□□□ -0.07
HDLBP-214ENST00000427183 ARHGEF11O15085 1522 aa14.58□□□□□ -0.08
HDLBP-214ENST00000427183 IDH1O75874 414 aaKnown RBP14.58□□□□□ -0.08
HDLBP-214ENST00000427183 CCDC96Q2M329 555 aa14.58□□□□□ -0.08
HDLBP-214ENST00000427183 PLEKHO1Q53GL0 409 aaPredicted RBP14.58□□□□□ -0.08
HDLBP-214ENST00000427183 CTR9Q6PD62 1173 aa14.58□□□□□ -0.08
HDLBP-214ENST00000427183 PRPF4BQ13523 1007 aaKnown RBP14.58□□□□□ -0.08
HDLBP-214ENST00000427183 CCDC82Q8N4S0 544 aa14.58□□□□□ -0.08
HDLBP-214ENST00000427183 SRGAP3O43295 1099 aa14.58□□□□□ -0.08
HDLBP-214ENST00000427183 MAATS1Q7Z4T9 603 aa14.58□□□□□ -0.08
HDLBP-214ENST00000427183 ZSCAN31Q96LW9 406 aaPredicted RBP14.58□□□□□ -0.08
HDLBP-214ENST00000427183 ZSWIM4Q9H7M6 989 aa14.58□□□□□ -0.08
HDLBP-214ENST00000427183 LIG1P18858 919 aa14.57□□□□□ -0.08
HDLBP-214ENST00000427183 CTNNA2P26232 953 aa14.57□□□□□ -0.08
HDLBP-214ENST00000427183 PAFAH1B1P43034 410 aa14.57□□□□□ -0.08
HDLBP-214ENST00000427183 LRP2BPQ9P2M1 347 aa14.57□□□□□ -0.08
HDLBP-214ENST00000427183 ZSCAN25Q6NSZ9 544 aa14.57□□□□□ -0.08
HDLBP-214ENST00000427183 CKAP2LQ8IYA6 745 aa14.57□□□□□ -0.08
HDLBP-214ENST00000427183 DDX23Q9BUQ8 820 aaKnown RBP14.57□□□□□ -0.08
HDLBP-214ENST00000427183 SRCIN1Q9C0H9 1055 aa14.57□□□□□ -0.08
HDLBP-214ENST00000427183 TRMT1LQ7Z2T5 733 aaKnown RBP14.57□□□□□ -0.08
HDLBP-214ENST00000427183 PLEKHH2Q8IVE3 1493 aa14.57□□□□□ -0.08
HDLBP-214ENST00000427183 ZBTB9Q96C00 473 aa14.57□□□□□ -0.08
HDLBP-214ENST00000427183 HOMER2Q9NSB8 354 aa14.56□□□□□ -0.08
HDLBP-214ENST00000427183 CEP131Q9UPN4 1083 aa14.56□□□□□ -0.08
HDLBP-214ENST00000427183 SPTY2D1Q68D10 685 aaPredicted RBP14.56□□□□□ -0.08
HDLBP-214ENST00000427183 USP25Q9UHP3 1055 aa14.56□□□□□ -0.08
HDLBP-214ENST00000427183 CCT4P50991 539 aaKnown RBP14.56□□□□□ -0.08
HDLBP-214ENST00000427183 CABP4P57796 275 aa14.56□□□□□ -0.08
HDLBP-214ENST00000427183 MNAT1P51948 309 aa14.56□□□□□ -0.08
HDLBP-214ENST00000427183 TSG101Q99816 390 aa14.55□□□□□ -0.08
HDLBP-214ENST00000427183 BICDL1Q6ZP65 573 aa14.55□□□□□ -0.08
HDLBP-214ENST00000427183 KIF2AO00139 706 aaPredicted RBP14.55□□□□□ -0.08
HDLBP-214ENST00000427183 PPP2R1AP30153 589 aa14.55□□□□□ -0.08
HDLBP-214ENST00000427183 SPATA24Q86W54 205 aa14.55□□□□□ -0.08
HDLBP-214ENST00000427183 ABCF2Q9UG63 623 aa14.55□□□□□ -0.08
HDLBP-214ENST00000427183 CCDC141Q6ZP82 1450 aa14.55□□□□□ -0.08
HDLBP-214ENST00000427183 WASF1Q92558 559 aa14.55□□□□□ -0.08
HDLBP-214ENST00000427183 LARP6Q9BRS8 491 aaKnown RBP14.55□□□□□ -0.08
HDLBP-214ENST00000427183 ANO10Q9NW15 660 aa14.55□□□□□ -0.08
HDLBP-214ENST00000427183 MCM3P25205 808 aa14.54□□□□□ -0.08
HDLBP-214ENST00000427183 SULT6B1Q6IMI4 303 aa14.54□□□□□ -0.08
HDLBP-214ENST00000427183 CTNNA3Q9UI47 895 aa14.54□□□□□ -0.08
HDLBP-214ENST00000427183 TRIM21P19474 475 aaKnown RBP14.54□□□□□ -0.08
HDLBP-214ENST00000427183 PDE3AQ14432 1141 aa14.54□□□□□ -0.08
HDLBP-214ENST00000427183 GRIPAP1Q4V328 841 aa14.54□□□□□ -0.08
HDLBP-214ENST00000427183 ESCO1Q5FWF5 840 aa14.54□□□□□ -0.08
HDLBP-214ENST00000427183 ISM2Q6H9L7 571 aa14.54□□□□□ -0.08
HDLBP-214ENST00000427183 CCDC160A6NGH7 325 aa14.54□□□□□ -0.08
HDLBP-214ENST00000427183 MINDY4BA8MYZ0 360 aa14.54□□□□□ -0.08
HDLBP-214ENST00000427183 BIN1O00499 593 aa14.54□□□□□ -0.08
HDLBP-214ENST00000427183 VPS36Q86VN1 386 aa14.54□□□□□ -0.08
HDLBP-214ENST00000427183 USO1O60763 962 aaKnown RBP14.53□□□□□ -0.08
HDLBP-214ENST00000427183 FBF1Q8TES7 1133 aa14.53□□□□□ -0.08
HDLBP-214ENST00000427183 AIDAQ96BJ3 306 aa14.53□□□□□ -0.08
HDLBP-214ENST00000427183 RNF216Q9NWF9 866 aaPredicted RBP14.53□□□□□ -0.08
HDLBP-214ENST00000427183 PRPF40BQ6NWY9 871 aaKnown RBP14.53□□□□□ -0.08
HDLBP-214ENST00000427183 CCDC183Q5T5S1 534 aa14.53□□□□□ -0.08
HDLBP-214ENST00000427183 TMC6Q7Z403 805 aa14.53□□□□□ -0.08
HDLBP-214ENST00000427183 APBB1IPQ7Z5R6 666 aaPredicted RBP14.53□□□□□ -0.08
HDLBP-214ENST00000427183 MYCNP04198 464 aaPredicted RBP14.52□□□□□ -0.08
HDLBP-214ENST00000427183 MVPQ14764 893 aaKnown RBP14.52□□□□□ -0.08
HDLBP-214ENST00000427183 DCAF8L1A6NGE4 600 aa14.52□□□□□ -0.09
HDLBP-214ENST00000427183 SMARCA5O60264 1052 aaPredicted RBP14.52□□□□□ -0.09
HDLBP-214ENST00000427183 NOP2P46087 812 aaKnown RBP14.52□□□□□ -0.09
HDLBP-214ENST00000427183 BMS1Q14692 1282 aaKnown RBP14.52□□□□□ -0.09
HDLBP-214ENST00000427183 CEP126Q9P2H0 1117 aa14.52□□□□□ -0.09
HDLBP-214ENST00000427183 SEC63Q9UGP8 760 aaKnown RBP14.52□□□□□ -0.09
HDLBP-214ENST00000427183 KRT32Q14532 448 aa14.52□□□□□ -0.09
HDLBP-214ENST00000427183 GIGYF2Q6Y7W6 1299 aaKnown RBP14.52□□□□□ -0.09
HDLBP-214ENST00000427183 PAIP2Q9BPZ3 127 aaKnown RBP14.52□□□□□ -0.09
HDLBP-214ENST00000427183 EXOC6BQ9Y2D4 811 aa14.52□□□□□ -0.09
HDLBP-214ENST00000427183 BRD4O60885 1362 aaPredicted RBP14.51□□□□□ -0.09
HDLBP-214ENST00000427183 FSD2A1L4K1 749 aa14.51□□□□□ -0.09
HDLBP-214ENST00000427183 TATP17735 454 aaPredicted RBP14.51□□□□□ -0.09
HDLBP-214ENST00000427183 ATF7IPQ6VMQ6 1270 aa14.51□□□□□ -0.09
HDLBP-214ENST00000427183 DNAAF4Q8WXU2 420 aa14.51□□□□□ -0.09
HDLBP-214ENST00000427183 SPECC1LQ69YQ0 1117 aa14.51□□□□□ -0.09
HDLBP-214ENST00000427183 GDPD2Q9HCC8 539 aa14.51□□□□□ -0.09
HDLBP-214ENST00000427183 CIZ1Q9ULV3 898 aaPredicted RBP14.51□□□□□ -0.09
HDLBP-214ENST00000427183 YEATS4O95619 227 aa14.51□□□□□ -0.09
HDLBP-214ENST00000427183 PPP1R14CQ8TAE6 165 aa14.51□□□□□ -0.09
HDLBP-214ENST00000427183 ANKRD18BA2A2Z9 1011 aa14.5□□□□□ -0.09
HDLBP-214ENST00000427183 C6orf163Q5TEZ5 329 aa14.5□□□□□ -0.09
HDLBP-214ENST00000427183 JADE2Q9NQC1 790 aa14.5□□□□□ -0.09
HDLBP-214ENST00000427183 FERP16591 822 aa14.5□□□□□ -0.09
HDLBP-214ENST00000427183 CCDC184Q52MB2 194 aa14.5□□□□□ -0.09
HDLBP-214ENST00000427183 SKAP1Q86WV1 359 aa14.5□□□□□ -0.09
HDLBP-214ENST00000427183 PANK2Q9BZ23 570 aa14.5□□□□□ -0.09
HDLBP-214ENST00000427183 TAOK3Q9H2K8 898 aa14.5□□□□□ -0.09
HDLBP-214ENST00000427183 MYO1BO43795 1136 aa14.5□□□□□ -0.09
HDLBP-214ENST00000427183 MTIF2P46199 727 aaKnown RBP14.5□□□□□ -0.09
HDLBP-214ENST00000427183 MXRA7P84157 204 aa14.5□□□□□ -0.09
HDLBP-214ENST00000427183 TCERG1LQ5VWI1 586 aa14.5□□□□□ -0.09
HDLBP-214ENST00000427183 CNNM3Q8NE01 707 aa14.5□□□□□ -0.09
HDLBP-214ENST00000427183 GTF2A1P52655 376 aaPredicted RBP14.5□□□□□ -0.09
HDLBP-214ENST00000427183 TNIP1Q15025 636 aa14.49□□□□□ -0.09
HDLBP-214ENST00000427183 SSFA2P28290 1259 aa14.49□□□□□ -0.09
HDLBP-214ENST00000427183 CCDC6Q16204 474 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms